Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00257X
(402 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 157 2e-39
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 157 2e-39
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 157 2e-39
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 157 2e-39
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 153 6e-38
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 153 6e-38
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 152 7e-38
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 152 7e-38
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 140 3e-34
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 134 3e-32
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 119 6e-28
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 117 3e-27
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 87 3e-18
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 67 4e-12
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 62 2e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 60 7e-10
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 50 6e-07
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 39 0.001
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 37 0.006
At5g43500.2 68418.m05318 expressed protein 32 0.12
At5g43500.1 68418.m05319 expressed protein 32 0.12
At5g56690.1 68418.m07076 F-box family protein contains F-box dom... 29 1.5
At2g42760.1 68415.m05295 expressed protein 28 2.0
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 27 3.5
At1g69270.1 68414.m07941 leucine-rich repeat family protein / pr... 27 4.7
At3g14720.1 68416.m01861 mitogen-activated protein kinase, putat... 27 6.2
At5g55740.1 68418.m06948 pentatricopeptide (PPR) repeat-containi... 26 8.2
At5g46330.1 68418.m05703 leucine-rich repeat transmembrane prote... 26 8.2
At4g00750.1 68417.m00102 dehydration-responsive family protein s... 26 8.2
At1g74190.1 68414.m08592 leucine-rich repeat family protein cont... 26 8.2
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 26 8.2
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 157 bits (382), Expect = 2e-39
Identities = 74/85 (87%), Positives = 79/85 (92%)
Frame = +1
Query: 1 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV*IGGSILA 180
DIRKDLY N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSV IGGSILA
Sbjct: 290 DIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA 349
Query: 181 SLYTFQQMWISKQEYDESGPSIVHR 255
SL TFQQMWISK EYDESGPSIVHR
Sbjct: 350 SLSTFQQMWISKSEYDESGPSIVHR 374
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 157 bits (382), Expect = 2e-39
Identities = 74/85 (87%), Positives = 79/85 (92%)
Frame = +1
Query: 1 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV*IGGSILA 180
DIRKDLY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSV IGGSILA
Sbjct: 290 DIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA 349
Query: 181 SLYTFQQMWISKQEYDESGPSIVHR 255
SL TFQQMWI+K EYDESGPSIVHR
Sbjct: 350 SLSTFQQMWIAKAEYDESGPSIVHR 374
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 157 bits (382), Expect = 2e-39
Identities = 74/85 (87%), Positives = 79/85 (92%)
Frame = +1
Query: 1 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV*IGGSILA 180
DIRKDLY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSV IGGSILA
Sbjct: 290 DIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA 349
Query: 181 SLYTFQQMWISKQEYDESGPSIVHR 255
SL TFQQMWI+K EYDESGPSIVHR
Sbjct: 350 SLSTFQQMWIAKAEYDESGPSIVHR 374
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 157 bits (382), Expect = 2e-39
Identities = 74/85 (87%), Positives = 79/85 (92%)
Frame = +1
Query: 1 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV*IGGSILA 180
DIRKDLY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSV IGGSILA
Sbjct: 290 DIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA 349
Query: 181 SLYTFQQMWISKQEYDESGPSIVHR 255
SL TFQQMWI+K EYDESGPSIVHR
Sbjct: 350 SLSTFQQMWIAKAEYDESGPSIVHR 374
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 153 bits (370), Expect = 6e-38
Identities = 72/85 (84%), Positives = 77/85 (90%)
Frame = +1
Query: 1 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV*IGGSILA 180
DIRKDLY N VLSGGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSV IGGSILA
Sbjct: 290 DIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA 349
Query: 181 SLYTFQQMWISKQEYDESGPSIVHR 255
SL TFQQMWISK EYDE+GP IVHR
Sbjct: 350 SLSTFQQMWISKAEYDEAGPGIVHR 374
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 153 bits (370), Expect = 6e-38
Identities = 72/85 (84%), Positives = 77/85 (90%)
Frame = +1
Query: 1 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV*IGGSILA 180
DIRKDLY N VLSGGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSV IGGSILA
Sbjct: 290 DIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA 349
Query: 181 SLYTFQQMWISKQEYDESGPSIVHR 255
SL TFQQMWISK EYDE+GP IVHR
Sbjct: 350 SLSTFQQMWISKAEYDEAGPGIVHR 374
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 152 bits (369), Expect = 7e-38
Identities = 72/85 (84%), Positives = 77/85 (90%)
Frame = +1
Query: 1 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV*IGGSILA 180
DIRKDLY N VLSGGTTM+ GI DRM KEITALAPS+MKIK++APPERKYSV IGGSILA
Sbjct: 290 DIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA 349
Query: 181 SLYTFQQMWISKQEYDESGPSIVHR 255
SL TFQQMWI+K EYDESGPSIVHR
Sbjct: 350 SLSTFQQMWIAKAEYDESGPSIVHR 374
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 152 bits (369), Expect = 7e-38
Identities = 72/85 (84%), Positives = 77/85 (90%)
Frame = +1
Query: 1 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV*IGGSILA 180
DIRKDLY N VLSGGTTM+ GI DRM KEITALAPS+MKIK++APPERKYSV IGGSILA
Sbjct: 290 DIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA 349
Query: 181 SLYTFQQMWISKQEYDESGPSIVHR 255
SL TFQQMWI+K EYDESGPSIVHR
Sbjct: 350 SLSTFQQMWIAKAEYDESGPSIVHR 374
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 140 bits (339), Expect = 3e-34
Identities = 65/85 (76%), Positives = 73/85 (85%)
Frame = +1
Query: 1 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV*IGGSILA 180
DIRKDLY N VLSGGTTM+PGIADRM KEI ALAP +MKIK++APPERKYSV +GGSILA
Sbjct: 291 DIRKDLYGNIVLSGGTTMFPGIADRMNKEINALAPPSMKIKVVAPPERKYSVWVGGSILA 350
Query: 181 SLYTFQQMWISKQEYDESGPSIVHR 255
SL +F MWI+K EYDE G +IVHR
Sbjct: 351 SLSSFAPMWITKAEYDEQGGAIVHR 375
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 134 bits (323), Expect = 3e-32
Identities = 62/84 (73%), Positives = 73/84 (86%)
Frame = +1
Query: 1 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV*IGGSILA 180
DIRKDLY N VLSGGTTM+ GI +RM KEI ALA + M+IKI+APPERKYSV IGGSILA
Sbjct: 242 DIRKDLYGNIVLSGGTTMFRGIEERMTKEINALAAANMRIKIVAPPERKYSVWIGGSILA 301
Query: 181 SLYTFQQMWISKQEYDESGPSIVH 252
SL T++QMWI+K EY+E+GP+IVH
Sbjct: 302 SLSTYEQMWITKAEYEENGPAIVH 325
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 119 bits (287), Expect = 6e-28
Identities = 58/72 (80%), Positives = 64/72 (88%)
Frame = +1
Query: 1 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV*IGGSILA 180
DIRKDLY N VLSGGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSV IGGSILA
Sbjct: 290 DIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA 349
Query: 181 SLYTFQQMWISK 216
SL TFQQ+ I +
Sbjct: 350 SLSTFQQVKIDQ 361
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 117 bits (282), Expect = 3e-27
Identities = 52/85 (61%), Positives = 67/85 (78%)
Frame = +1
Query: 1 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV*IGGSILA 180
D R+D+Y N +++GGTTM GI +RM KE+ AL PS+MK+K++ PPE + SV IGGSILA
Sbjct: 279 DTRRDMYGNILMTGGTTMLHGIKERMTKELNALVPSSMKVKVVVPPESECSVWIGGSILA 338
Query: 181 SLYTFQQMWISKQEYDESGPSIVHR 255
SL TF QMWI+K EY+E G +IVHR
Sbjct: 339 SLSTFHQMWITKDEYEEHGAAIVHR 363
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 87.4 bits (207), Expect = 3e-18
Identities = 40/88 (45%), Positives = 64/88 (72%), Gaps = 3/88 (3%)
Frame = +1
Query: 1 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP---PERKYSV*IGGS 171
DIR++LY++ +L+GGT+ + +R++K++ +P + ++K++A ER++SV IGGS
Sbjct: 351 DIRRELYSSILLAGGTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVWIGGS 410
Query: 172 ILASLYTFQQMWISKQEYDESGPSIVHR 255
ILASL +FQQMW SK EY+E G S + R
Sbjct: 411 ILASLGSFQQMWFSKSEYEEHGASYIQR 438
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 67.3 bits (157), Expect = 4e-12
Identities = 37/88 (42%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Frame = +1
Query: 10 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERK------YSV*IGGS 171
+ L NTVL GGTT G R QKE L S ++ ++ PPE YS +GG+
Sbjct: 274 RQLLENTVLCGGTTSMTGFESRFQKEAN-LCSSAIRPTLVKPPEYMPENLGMYSAWVGGA 332
Query: 172 ILASLYTFQQMWISKQEYDESGPSIVHR 255
ILA + Q ++K +YDE+GPS+VHR
Sbjct: 333 ILAKVVFPQNQHVTKADYDETGPSVVHR 360
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 61.7 bits (143), Expect = 2e-10
Identities = 35/97 (36%), Positives = 59/97 (60%), Gaps = 12/97 (12%)
Frame = +1
Query: 1 DIRKDLYANTVLSGGTTMYPGIADRMQKEI------TALAPS-----TMKIKIIAPPERK 147
D R LY + VLSGG+TMYPG+ R++KEI T L + ++++I PP RK
Sbjct: 289 DNRMMLYQHIVLSGGSTMYPGLPSRLEKEIQDRYLDTVLKGNKDGLKKLRLRIEDPPRRK 348
Query: 148 YSV*IGGSILASLY-TFQQMWISKQEYDESGPSIVHR 255
+ V +GG++LA + + WI++++Y E G + +++
Sbjct: 349 HMVYLGGAVLAGIMKDAPEFWINREDYMEEGINCLNK 385
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 59.7 bits (138), Expect = 7e-10
Identities = 28/80 (35%), Positives = 47/80 (58%)
Frame = +1
Query: 16 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV*IGGSILASLYTF 195
LY + +L+GG+T++P + +R++ E+ L P +KI + V GGS+LAS F
Sbjct: 338 LYQSIILTGGSTLFPQLKERLEGELRPLVPDHFDVKITTQEDPILGVWRGGSLLASSPDF 397
Query: 196 QQMWISKQEYDESGPSIVHR 255
+ M ++K EY+E G + R
Sbjct: 398 ESMCVTKAEYEELGSARCRR 417
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 50.0 bits (114), Expect = 6e-07
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 16/98 (16%)
Frame = +1
Query: 1 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTM----------------KIKIIA 132
D R+ LY N VLSGG+TM+ R+Q+++ + + + ++ +++
Sbjct: 319 DTRRALYKNIVLSGGSTMFKDFGRRLQRDLKKIVDARVLANNARTGGEITSQPVEVNVVS 378
Query: 133 PPERKYSV*IGGSILASLYTFQQMWISKQEYDESGPSI 246
P ++++V GGS+L+S F +K+EY+E G SI
Sbjct: 379 HPVQRFAVWFGGSVLSSTPEFFASCRTKEEYEEYGASI 416
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 39.1 bits (87), Expect = 0.001
Identities = 19/72 (26%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Frame = +1
Query: 19 YANTVLSGGTTMYPGIADRMQKEITALAPSTMK--IKIIAPPERKYSV*IGGSILASLYT 192
+ VL+GG+ PG+++R+++E+ PS++ I++I PP + G ++++L
Sbjct: 392 FKTVVLTGGSACLPGLSERLERELQDHLPSSISNGIRVIPPPYGVDTSWHGAKLISNLSI 451
Query: 193 FQQMW-ISKQEY 225
F W I+++++
Sbjct: 452 FPGPWCITRKQF 463
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 36.7 bits (81), Expect = 0.006
Identities = 18/79 (22%), Positives = 39/79 (49%)
Frame = +1
Query: 1 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV*IGGSILA 180
++ + L ++ +++GG ++ PG+ +R++ I + P I ++ + G S A
Sbjct: 632 ELEERLTSSILMTGGCSLLPGMNERLECGIRMIRPCGSPINVVRAMDPVLDAWRGASAFA 691
Query: 181 SLYTFQQMWISKQEYDESG 237
+ F +K +YDE G
Sbjct: 692 ANLNFLGNAFTKMDYDEKG 710
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 32.3 bits (70), Expect = 0.12
Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Frame = +1
Query: 1 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII----APPERKYSV*IGG 168
D+R+ L+++ L GG + G+ +++ + P T I + + E ++ GG
Sbjct: 477 DLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAIDTVQVLPSRTEPQFVTWKGG 536
Query: 169 SILASLYTFQQMWISKQEYDESG 237
+IL L ++ WI + ++ +G
Sbjct: 537 AILGILDFGREAWIERHQWMVNG 559
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 32.3 bits (70), Expect = 0.12
Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Frame = +1
Query: 1 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII----APPERKYSV*IGG 168
D+R+ L+++ L GG + G+ +++ + P T I + + E ++ GG
Sbjct: 489 DLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAIDTVQVLPSRTEPQFVTWKGG 548
Query: 169 SILASLYTFQQMWISKQEYDESG 237
+IL L ++ WI + ++ +G
Sbjct: 549 AILGILDFGREAWIERHQWMVNG 571
>At5g56690.1 68418.m07076 F-box family protein contains F-box domain
Pfam:PF00646
Length = 402
Score = 28.7 bits (61), Expect = 1.5
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +1
Query: 85 EITALAPSTMKIKIIAPPERKYSV*IGGSILASLYTFQQMWISKQEYDE 231
EI+ L P + +KI+A K + I S+L+ + F MW+ K +YD+
Sbjct: 3 EISGL-PDDLLVKILAFLPTKVA--ISTSVLSKQWRFLWMWLPKLKYDD 48
>At2g42760.1 68415.m05295 expressed protein
Length = 267
Score = 28.3 bits (60), Expect = 2.0
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +3
Query: 84 GNHSSRPIDNED*DHCSPREEVLRMNRWIDPRLPL-YLPTDVDLETGVRRVWS 239
GN ++RP +E DHC R+ ++ I R+P ++VDL+ + R+W+
Sbjct: 207 GNRAARPYLSEAWDHCGGRKGKKQITPEIKWRVPAPAAASEVDLKDNL-RLWA 258
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 27.5 bits (58), Expect = 3.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 206 GSRNRSTTSLVPPLYTEVLLSVETLSYDALQQNLQEGGSN 325
GS + SL+P T++LL ++ QQN Q+GG N
Sbjct: 422 GSSLQPGGSLLPRGDTDMLLKLKMALLQQQQQNQQQGGGN 461
>At1g69270.1 68414.m07941 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 540
Score = 27.1 bits (57), Expect = 4.7
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -1
Query: 162 DSYGVLPLWGSNDLNLHCRW-GESCD 88
D GVL W S+ + HC W G SC+
Sbjct: 45 DPNGVLSSWVSDSSSNHCSWYGVSCN 70
>At3g14720.1 68416.m01861 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK19) identical to mitogen-activated
protein kinase (MAPK)(AtMPK19), PMID:12119167;
Length = 586
Score = 26.6 bits (56), Expect = 6.2
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +1
Query: 40 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYS 153
G + +YP ++K+ L ++ K + PP+RK++
Sbjct: 360 GSSFLYPSAIGHLRKQFAYLEENSGKSGPVIPPDRKHA 397
>At5g55740.1 68418.m06948 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 830
Score = 26.2 bits (55), Expect = 8.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 200 RCGSRNRSTTSLVPPLYTEVLLSVETLSYDALQQNLQEGGSNY 328
+CG N++ LY+E+ LS +S AL NL+E + Y
Sbjct: 594 KCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALY 636
>At5g46330.1 68418.m05703 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1173
Score = 26.2 bits (55), Expect = 8.2
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = -1
Query: 168 STDSYGVLPLWGSNDLNLHCRW-GESCDFLLHTVGDS 61
S D GVL W HC W G +CD H V S
Sbjct: 42 SNDPLGVLSDWTIIGSLRHCNWTGITCDSTGHVVSVS 78
>At4g00750.1 68417.m00102 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 633
Score = 26.2 bits (55), Expect = 8.2
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +3
Query: 123 DHCSPREEVLRMNRWIDPRLPLYLPTDVDLETGVRRV 233
D C + +L M+R + P+ + + D+D+ T V+++
Sbjct: 555 DRCDMEDILLEMDRILRPKGSVIIRDDIDVLTKVKKI 591
>At1g74190.1 68414.m08592 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Cf-2.1
[Lycopersicon pimpinellifolium] gi|1184075|gb|AAC15779
Length = 965
Score = 26.2 bits (55), Expect = 8.2
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -1
Query: 165 TDSYGVLPLWGSNDLNLHCRW-GESCD 88
T+S VLP W ++ + CRW G +C+
Sbjct: 46 TESESVLPTWTNDTTSDCCRWKGVACN 72
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 26.2 bits (55), Expect = 8.2
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -2
Query: 239 GPDSSYSCFEI 207
GPDSSYSC E+
Sbjct: 354 GPDSSYSCLEV 364
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,215,006
Number of Sequences: 28952
Number of extensions: 187773
Number of successful extensions: 609
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 606
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 585758608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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