Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00256
         (745 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010035-1|AAQ22504.1| 1596|Drosophila melanogaster LD47819p pro...    31   2.2  
AE014298-2938|AAN09519.1| 1596|Drosophila melanogaster CG12701-P...    31   2.2  
AE014298-2937|AAF49020.1| 1596|Drosophila melanogaster CG12701-P...    31   2.2  
AE013599-869|AAF58935.1|  254|Drosophila melanogaster CG13953-PA...    30   3.8  
AF218776-1|AAF44627.1| 1843|Drosophila melanogaster GTPase activ...    29   8.8  
AE014134-3162|AAF53844.2| 1843|Drosophila melanogaster CG10538-P...    29   8.8  

>BT010035-1|AAQ22504.1| 1596|Drosophila melanogaster LD47819p protein.
          Length = 1596

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = +3

Query: 282  QDPQQDPGARRKRLRHPGLHQG*LGQNSDAHERAHHSEQRQRH 410
            Q PQQ      + + HP LHQ  LG+     E  HH +QR+ H
Sbjct: 995  QPPQQQLVHHYQAVLHP-LHQQ-LGEQHQRQEADHHQQQRELH 1035


>AE014298-2938|AAN09519.1| 1596|Drosophila melanogaster CG12701-PB,
            isoform B protein.
          Length = 1596

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = +3

Query: 282  QDPQQDPGARRKRLRHPGLHQG*LGQNSDAHERAHHSEQRQRH 410
            Q PQQ      + + HP LHQ  LG+     E  HH +QR+ H
Sbjct: 995  QPPQQQLVHHYQAVLHP-LHQQ-LGEQHQRQEADHHQQQRELH 1035


>AE014298-2937|AAF49020.1| 1596|Drosophila melanogaster CG12701-PA,
            isoform A protein.
          Length = 1596

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = +3

Query: 282  QDPQQDPGARRKRLRHPGLHQG*LGQNSDAHERAHHSEQRQRH 410
            Q PQQ      + + HP LHQ  LG+     E  HH +QR+ H
Sbjct: 995  QPPQQQLVHHYQAVLHP-LHQQ-LGEQHQRQEADHHQQQRELH 1035


>AE013599-869|AAF58935.1|  254|Drosophila melanogaster CG13953-PA
           protein.
          Length = 254

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = +3

Query: 258 QQRARHGSQDPQQDPGARRKRLRHPGLHQG*LGQNSDAHERAHHSEQRQ 404
           QQ A +G Q PQQ   ++ ++ +H G H      ++  H + H  +Q+Q
Sbjct: 119 QQHAAYGQQQPQQHLQSQHQQQQHLGQH------HTQQHSQQHAQQQQQ 161


>AF218776-1|AAF44627.1| 1843|Drosophila melanogaster GTPase
           activating protein protein.
          Length = 1843

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
 Frame = -1

Query: 307 APGSCWGSCDPCRARC*PLVL--SVHVVAVAEARIQSPVDDTPLTPVVNMLD---QLSSE 143
           +P SCW     C  RC P ++  S   + + +  +   V D  ++ + NM +   +L SE
Sbjct: 182 SPESCWFIIRVCPQRCEPFLIKRSFENMQLLDEMLHRCVYDRKISGLRNMEELAAELPSE 241

Query: 142 GELEQLVLPYVRQ 104
            ++E  V  Y+ +
Sbjct: 242 SDVEYAVAKYLER 254


>AE014134-3162|AAF53844.2| 1843|Drosophila melanogaster CG10538-PA
           protein.
          Length = 1843

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
 Frame = -1

Query: 307 APGSCWGSCDPCRARC*PLVL--SVHVVAVAEARIQSPVDDTPLTPVVNMLD---QLSSE 143
           +P SCW     C  RC P ++  S   + + +  +   V D  ++ + NM +   +L SE
Sbjct: 182 SPESCWFIIRVCPQRCEPFLIKRSFENMQLLDEMLHRCVYDRKISGLRNMEELAAELPSE 241

Query: 142 GELEQLVLPYVRQ 104
            ++E  V  Y+ +
Sbjct: 242 SDVEYAVAKYLER 254


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,390,402
Number of Sequences: 53049
Number of extensions: 743218
Number of successful extensions: 2630
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2629
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)