Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00256
         (745 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   5.3  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   5.3  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   7.0  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              22   7.0  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              22   7.0  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   7.0  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    21   9.2  

>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -2

Query: 459 HAVYDDHAHAFVNDSRNVSGAVRNDGRAHERH 364
           H ++  H H      ++ S A +   +AHE+H
Sbjct: 170 HQMHTQHPHMQPQQGQHQSQAQQQHLQAHEQH 201


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = +1

Query: 301 PVRDENDCDTRAYIKDDSVKIVTLMSAPIIPNSA-RDITRIVN 426
           P+R  +DC T + +  D   +V L       +S  R +  IV+
Sbjct: 419 PIRKISDCSTTSSLSGDESDVVELQPVKSSKSSGWRKLRNIVH 461


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/22 (36%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = +3

Query: 357 QNSDAH-ERAHHSEQRQRHYEN 419
           QN++ H ++AHHS +    + N
Sbjct: 441 QNNNQHNDQAHHSSKSNNRHNN 462


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -1

Query: 640 SPVDTHLKSRSIRSCLLRKATCESII 563
           S  D HLKS  +  C  +  T + I+
Sbjct: 108 SDADIHLKSSKLIKCFAKYKTLKEIM 133


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 585 FLNKQLLMDLLFKCVSTGDYDKAVTITKSLQ 677
           FLN+  +  L+ +C +  D +  + ITK  Q
Sbjct: 91  FLNENEINQLITECSAISDTNVHLKITKIFQ 121


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1

Query: 196 DDTPLTPVVNMLDQLSSEGELEQLV 122
           D+TPL PVV + +  S+E  L  +V
Sbjct: 439 DETPLDPVVVISNDKSTEFFLATVV 463


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 56  ACPVDPSSCAPSLTTG 9
           AC  +PSS A S T+G
Sbjct: 350 ACAAEPSSDAVSTTSG 365


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,924
Number of Sequences: 438
Number of extensions: 4748
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)