Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00255
         (640 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          24   1.2  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    23   2.1  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    23   2.1  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   3.8  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    22   5.0  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   5.0  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   6.6  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   6.6  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   6.6  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   6.6  
Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.      21   8.7  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   8.7  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/21 (52%), Positives = 12/21 (57%), Gaps = 2/21 (9%)
 Frame = +3

Query: 354 PPPPLVRSTANT--TTMNVPP 410
           PPPP V S A T  T   +PP
Sbjct: 734 PPPPRVESFAETVRTVSKIPP 754


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 17/70 (24%), Positives = 24/70 (34%)
 Frame = +3

Query: 15  GGRPQHRQQPVDTRPPGQHTEAHSYRCHHADVPRRTIGCLRSSARQQLVSTRNSYSGANA 194
           G  PQH      T P  +     S   HH        G   S +   + S  ++ S A A
Sbjct: 42  GSSPQHSSSSASTSPAARMYPYVSAAHHHHQAAAAAFGAAASGS--MVPSFSSTASSALA 99

Query: 195 ASAQVCSGSS 224
           A+    +  S
Sbjct: 100 AAVDAATDKS 109


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 17/70 (24%), Positives = 24/70 (34%)
 Frame = +3

Query: 15  GGRPQHRQQPVDTRPPGQHTEAHSYRCHHADVPRRTIGCLRSSARQQLVSTRNSYSGANA 194
           G  PQH      T P  +     S   HH        G   S +   + S  ++ S A A
Sbjct: 42  GSSPQHSSSSASTSPAARMYPYVSAAHHHHQAAAAAFGAAASGS--MVPSFSSTASSALA 99

Query: 195 ASAQVCSGSS 224
           A+    +  S
Sbjct: 100 AAVDAATDKS 109


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 131 PPLKRSPTAGLYPELLLRRKRS 196
           PP+    T+GL P LL   K+S
Sbjct: 155 PPITSFETSGLRPHLLENVKKS 176


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +3

Query: 69  HTEAHSYRCHHAD 107
           HT    YRC H D
Sbjct: 32  HTGERPYRCEHCD 44


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +3

Query: 69  HTEAHSYRCHHAD 107
           HT    YRC H D
Sbjct: 185 HTGERPYRCEHCD 197


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +3

Query: 399 NVPPQVTGTMNGHSTSQSVDTRKRLTPIPDINTTGNQRR 515
           NVP  +T T NG     ++D  + +      N  G Q R
Sbjct: 182 NVPQMITLTFNGAVNVDNIDLYEEIFNGNRANPNGCQIR 220


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +3

Query: 399 NVPPQVTGTMNGHSTSQSVDTRKRLTPIPDINTTGNQRR 515
           NVP  +T T NG     ++D  + +      N  G Q R
Sbjct: 189 NVPQMITLTFNGAVNIDNIDLYEEIFNGNRANPNGCQIR 227


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 405 PPQVTGTMNGHSTSQS 452
           PP++TG+ NG   ++S
Sbjct: 41  PPELTGSTNGDGGARS 56


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 405 PPQVTGTMNGHSTSQS 452
           PP++TG+ NG   ++S
Sbjct: 197 PPELTGSTNGDGGARS 212


>Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.
          Length = 72

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 287 MWKSGGRCDG 258
           +WK  GRC+G
Sbjct: 4   LWKVRGRCEG 13


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -3

Query: 548 LCFPLTPFVPYTALVASSVDVWYRC 474
           L F +  +   T  +A+ +D W RC
Sbjct: 305 LLFGVLAYYSTTCDIATILDFWVRC 329


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,332
Number of Sequences: 336
Number of extensions: 3647
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)