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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00255
         (640 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81017-3|CAB54257.1|  629|Caenorhabditis elegans Hypothetical pr...    33   0.23 
Z81017-2|CAB02672.1|  578|Caenorhabditis elegans Hypothetical pr...    33   0.23 
Z81017-1|CAB02669.1|  592|Caenorhabditis elegans Hypothetical pr...    33   0.23 
U80221-1|AAB38367.1|  579|Caenorhabditis elegans F58A3.1b protein.     33   0.23 
U80220-1|AAB38366.1|  592|Caenorhabditis elegans F58A3.1a protein.     33   0.23 
Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical p...    32   0.40 
AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical...    32   0.40 
Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical pr...    31   0.53 
U67951-5|AAB07574.2|  778|Caenorhabditis elegans Degeneration of...    31   0.92 
L34414-1|AAA99524.1|  778|Caenorhabditis elegans degenerin protein.    31   0.92 
S47168-2|AAB23866.2|  919|Caenorhabditis elegans UNC-5 protein.        30   1.2  
S47168-1|AAB23867.2|  947|Caenorhabditis elegans UNC-5 protein.        30   1.2  
AF036698-5|AAB88356.2|  567|Caenorhabditis elegans Uncoordinated...    30   1.2  
AF036698-4|AAB88355.1|  919|Caenorhabditis elegans Uncoordinated...    30   1.2  
AF106578-1|AAC78197.1|  252|Caenorhabditis elegans Hypothetical ...    29   2.1  
AC006709-1|AAF60432.2|  256|Caenorhabditis elegans Hypothetical ...    29   2.1  
Z84574-6|CAE17784.1|  174|Caenorhabditis elegans Hypothetical pr...    29   3.7  
AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical...    29   3.7  
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ...    28   4.9  
Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical pr...    28   6.5  
AL132948-35|CAC51060.2|  887|Caenorhabditis elegans Hypothetical...    28   6.5  
AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein.       28   6.5  
AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical ...    28   6.5  
AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical ...    28   6.5  
AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical ...    28   6.5  
AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical ...    28   6.5  
AL117195-28|CAB55014.1|  458|Caenorhabditis elegans Hypothetical...    27   8.6  
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen...    27   8.6  

>Z81017-3|CAB54257.1|  629|Caenorhabditis elegans Hypothetical
           protein F58A3.1c protein.
          Length = 629

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 7/85 (8%)
 Frame = +3

Query: 216 GSSGGAGGRPVQHXXXXXXXGFPHKSQHQRNVQFPNSALTMAMGQQPPPPLVRSTANTTT 395
           GS  G GG P            P+   H  + Q PNS +    GQ PP  +    +N   
Sbjct: 509 GSMQGHGGMPPMPSTMANQMPPPNLPPHTMSNQMPNSRMPPMQGQMPPSGMPGQMSNPNM 568

Query: 396 M--NVPP-----QVTGTMNGHSTSQ 449
           M   +PP     Q+ G+M+    +Q
Sbjct: 569 MGSGMPPMSMSSQMPGSMSNPMPNQ 593


>Z81017-2|CAB02672.1|  578|Caenorhabditis elegans Hypothetical
           protein F58A3.1b protein.
          Length = 578

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 7/85 (8%)
 Frame = +3

Query: 216 GSSGGAGGRPVQHXXXXXXXGFPHKSQHQRNVQFPNSALTMAMGQQPPPPLVRSTANTTT 395
           GS  G GG P            P+   H  + Q PNS +    GQ PP  +    +N   
Sbjct: 458 GSMQGHGGMPPMPSTMANQMPPPNLPPHTMSNQMPNSRMPPMQGQMPPSGMPGQMSNPNM 517

Query: 396 M--NVPP-----QVTGTMNGHSTSQ 449
           M   +PP     Q+ G+M+    +Q
Sbjct: 518 MGSGMPPMSMSSQMPGSMSNPMPNQ 542


>Z81017-1|CAB02669.1|  592|Caenorhabditis elegans Hypothetical
           protein F58A3.1a protein.
          Length = 592

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 7/85 (8%)
 Frame = +3

Query: 216 GSSGGAGGRPVQHXXXXXXXGFPHKSQHQRNVQFPNSALTMAMGQQPPPPLVRSTANTTT 395
           GS  G GG P            P+   H  + Q PNS +    GQ PP  +    +N   
Sbjct: 472 GSMQGHGGMPPMPSTMANQMPPPNLPPHTMSNQMPNSRMPPMQGQMPPSGMPGQMSNPNM 531

Query: 396 M--NVPP-----QVTGTMNGHSTSQ 449
           M   +PP     Q+ G+M+    +Q
Sbjct: 532 MGSGMPPMSMSSQMPGSMSNPMPNQ 556


>U80221-1|AAB38367.1|  579|Caenorhabditis elegans F58A3.1b protein.
          Length = 579

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 7/85 (8%)
 Frame = +3

Query: 216 GSSGGAGGRPVQHXXXXXXXGFPHKSQHQRNVQFPNSALTMAMGQQPPPPLVRSTANTTT 395
           GS  G GG P            P+   H  + Q PNS +    GQ PP  +    +N   
Sbjct: 459 GSMQGHGGMPPMPSTMANQMPPPNLPPHTMSNQMPNSRMPPMQGQMPPSGMPGQMSNPNM 518

Query: 396 M--NVPP-----QVTGTMNGHSTSQ 449
           M   +PP     Q+ G+M+    +Q
Sbjct: 519 MGSGMPPMSMSSQMPGSMSNPMPNQ 543


>U80220-1|AAB38366.1|  592|Caenorhabditis elegans F58A3.1a protein.
          Length = 592

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 7/85 (8%)
 Frame = +3

Query: 216 GSSGGAGGRPVQHXXXXXXXGFPHKSQHQRNVQFPNSALTMAMGQQPPPPLVRSTANTTT 395
           GS  G GG P            P+   H  + Q PNS +    GQ PP  +    +N   
Sbjct: 472 GSMQGHGGMPPMPSTMANQMPPPNLPPHTMSNQMPNSRMPPMQGQMPPSGMPGQMSNPNM 531

Query: 396 M--NVPP-----QVTGTMNGHSTSQ 449
           M   +PP     Q+ G+M+    +Q
Sbjct: 532 MGSGMPPMSMSSQMPGSMSNPMPNQ 556


>Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical
            protein C24H11.7 protein.
          Length = 1820

 Score = 31.9 bits (69), Expect = 0.40
 Identities = 20/58 (34%), Positives = 26/58 (44%)
 Frame = +3

Query: 282  PHKSQHQRNVQFPNSALTMAMGQQPPPPLVRSTANTTTMNVPPQVTGTMNGHSTSQSV 455
            P   Q Q     P      A G +PPPP   STA T+T +  P +    +  ST+ SV
Sbjct: 1737 PRPGQQQSEASEPKKE--HASGLEPPPPSSNSTAATSTSD--PSIATAQSSISTASSV 1790


>AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical
            protein C24H11.7 protein.
          Length = 1820

 Score = 31.9 bits (69), Expect = 0.40
 Identities = 20/58 (34%), Positives = 26/58 (44%)
 Frame = +3

Query: 282  PHKSQHQRNVQFPNSALTMAMGQQPPPPLVRSTANTTTMNVPPQVTGTMNGHSTSQSV 455
            P   Q Q     P      A G +PPPP   STA T+T +  P +    +  ST+ SV
Sbjct: 1737 PRPGQQQSEASEPKKE--HASGLEPPPPSSNSTAATSTSD--PSIATAQSSISTASSV 1790


>Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical
           protein ZK1067.2 protein.
          Length = 2219

 Score = 31.5 bits (68), Expect = 0.53
 Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 3/94 (3%)
 Frame = +2

Query: 359 STSCEEH-GQHNNYERASASDRHDEW--PLNLSIRGHSQKAYTDTRHQHYWQPTPYKVQK 529
           STS E H G HN     S   R D++  P N   +    +  TD + Q      PY+ ++
Sbjct: 413 STSMENHLGFHNGGGTVSEHSRDDKFVSPQNCEEKRKYCEEDTDAKPQQ-----PYRFEE 467

Query: 530 ALVENTMVPCINSKPYQYTELLMTLPDLGSHFFP 631
              E   V C  S+P +  + L ++P L  +  P
Sbjct: 468 IKFEPIWVKCEKSEPPEDFKTLPSVPVLSEYVNP 501


>U67951-5|AAB07574.2|  778|Caenorhabditis elegans Degeneration of
           certain neuronsprotein 1 protein.
          Length = 778

 Score = 30.7 bits (66), Expect = 0.92
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +3

Query: 357 PPPLVRSTANTTTMNVPPQVTGTMNGHSTSQSVDTRKRL 473
           PPP   ST  TTT   PP  T   N  +   + +T K +
Sbjct: 356 PPPTTTSTTTTTTTTPPPTTTARPNQRAIVSNPETIKAM 394


>L34414-1|AAA99524.1|  778|Caenorhabditis elegans degenerin protein.
          Length = 778

 Score = 30.7 bits (66), Expect = 0.92
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +3

Query: 357 PPPLVRSTANTTTMNVPPQVTGTMNGHSTSQSVDTRKRL 473
           PPP   ST  TTT   PP  T   N  +   + +T K +
Sbjct: 356 PPPTTTSTTTTTTTTPPPTTTARPNQRAIVSNPETIKAM 394


>S47168-2|AAB23866.2|  919|Caenorhabditis elegans UNC-5 protein.
          Length = 919

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = +3

Query: 162 STRNSYSGANAASAQVCSGSSGGAGGR 242
           STRN+  G+ AA  Q CS SS G+GG+
Sbjct: 441 STRNA--GSRAALIQECSSSSSGSGGK 465


>S47168-1|AAB23867.2|  947|Caenorhabditis elegans UNC-5 protein.
          Length = 947

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = +3

Query: 162 STRNSYSGANAASAQVCSGSSGGAGGR 242
           STRN+  G+ AA  Q CS SS G+GG+
Sbjct: 469 STRNA--GSRAALIQECSSSSSGSGGK 493


>AF036698-5|AAB88356.2|  567|Caenorhabditis elegans Uncoordinated
           protein 5, isoform b protein.
          Length = 567

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = +3

Query: 162 STRNSYSGANAASAQVCSGSSGGAGGR 242
           STRN+  G+ AA  Q CS SS G+GG+
Sbjct: 441 STRNA--GSRAALIQECSSSSSGSGGK 465


>AF036698-4|AAB88355.1|  919|Caenorhabditis elegans Uncoordinated
           protein 5, isoform a protein.
          Length = 919

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = +3

Query: 162 STRNSYSGANAASAQVCSGSSGGAGGR 242
           STRN+  G+ AA  Q CS SS G+GG+
Sbjct: 441 STRNA--GSRAALIQECSSSSSGSGGK 465


>AF106578-1|AAC78197.1|  252|Caenorhabditis elegans Hypothetical
           protein H11L12.1 protein.
          Length = 252

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
 Frame = +3

Query: 324 SALTMAMGQQPPPPLVRSTANTTTMNVPPQVTGTMNGHSTSQ--SVDTRKRLTPIPDINT 497
           +A TM+ G+ P    V+   N   + V   + GT       Q      +K+  P  D+N 
Sbjct: 145 TASTMSDGE-PEEDKVKLCGNRLEVGVTDNLAGTQRRKEQQQLQGAQAKKQQAPQRDVNR 203

Query: 498 TGNQRRIRYKRR 533
             N +++  KRR
Sbjct: 204 KANHQKLSRKRR 215


>AC006709-1|AAF60432.2|  256|Caenorhabditis elegans Hypothetical
           protein Y119C1A.1 protein.
          Length = 256

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +3

Query: 276 GFPHKSQHQRNVQFPNSALTMAMGQQPPPPLVRSTANTTTMNVPP 410
           GFP  S  Q   Q PN     A+     PP   STA++++ +  P
Sbjct: 22  GFPQFSYPQHQQQIPNPPYGWALNAAALPPYPSSTASSSSASQTP 66


>Z84574-6|CAE17784.1|  174|Caenorhabditis elegans Hypothetical
           protein F33E2.7 protein.
          Length = 174

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = +3

Query: 363 PLVRSTANTTTMNVPPQVTGTMNGHSTSQSVDTRKRLTPIPDINTT 500
           P   +T  TTT   P   T T    +T+ +  T  R TP+ ++  T
Sbjct: 102 PTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTRSTPLTEVFRT 147


>AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.31 protein.
          Length = 1219

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +3

Query: 375 STANTTTMNVPPQVTGTMNGHSTSQSVDTRKRLTPIP 485
           +T  TTT  VPP  T T    +   +V T  R T +P
Sbjct: 339 TTTTTTTTTVPPTTTRTTTTTTPRPTVPTVPRTTTVP 375


>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
           protein Y48G9A.4 protein.
          Length = 1115

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
 Frame = +3

Query: 282 PHKSQHQRNVQFPNSALTMAMGQQPPPPLVRS--TANTTTMNVPP 410
           PHK Q +   + P       +   PPPP +     AN T + +PP
Sbjct: 518 PHKEQRRSTSKDPPRPAPPPVSSIPPPPPIAGLLAANGTNVPIPP 562


>Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical
           protein F40F11.2b protein.
          Length = 1607

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 19/81 (23%), Positives = 32/81 (39%)
 Frame = +3

Query: 282 PHKSQHQRNVQFPNSALTMAMGQQPPPPLVRSTANTTTMNVPPQVTGTMNGHSTSQSVDT 461
           P K    +    PN+A  +A  QQ  PP  + T     M+  P  T  +   S S  + +
Sbjct: 338 PAKKAAPKRKTVPNTAKNLAQNQQIMPPQAQITPTKLVMD--PPTTTMVPSSSQSNHMYS 395

Query: 462 RKRLTPIPDINTTGNQRRIRY 524
               T    ++  G  ++ +Y
Sbjct: 396 NDGFTTYNQMDEPGTSQQQQY 416


>Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical
           protein F40F11.2a protein.
          Length = 1593

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 19/81 (23%), Positives = 32/81 (39%)
 Frame = +3

Query: 282 PHKSQHQRNVQFPNSALTMAMGQQPPPPLVRSTANTTTMNVPPQVTGTMNGHSTSQSVDT 461
           P K    +    PN+A  +A  QQ  PP  + T     M+  P  T  +   S S  + +
Sbjct: 324 PAKKAAPKRKTVPNTAKNLAQNQQIMPPQAQITPTKLVMD--PPTTTMVPSSSQSNHMYS 381

Query: 462 RKRLTPIPDINTTGNQRRIRY 524
               T    ++  G  ++ +Y
Sbjct: 382 NDGFTTYNQMDEPGTSQQQQY 402


>AL132948-35|CAC51060.2|  887|Caenorhabditis elegans Hypothetical
           protein Y39B6A.47 protein.
          Length = 887

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
 Frame = +3

Query: 186 ANAASAQVCSGSSGGAGGRPVQHXXXXXXXGFPHKSQHQRNVQFPNSALTMAM--GQQPP 359
           AN+      S SS  + GR +           P   Q +R    P+S   + +  G QP 
Sbjct: 584 ANSIGTVSLSASSKSSSGRVLSSRPHTVQIFSPIFLQPKRLTLIPDSKFQLEVVGGSQPT 643

Query: 360 PPLVRSTANTTTMNVPP 410
           PPL  S  N+   ++ P
Sbjct: 644 PPLDFSLNNSMIASIEP 660


>AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein.
          Length = 1666

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/55 (25%), Positives = 25/55 (45%)
 Frame = +3

Query: 291  SQHQRNVQFPNSALTMAMGQQPPPPLVRSTANTTTMNVPPQVTGTMNGHSTSQSV 455
            S H  ++   ++       QQ   P+VRS + TT  ++P    G   G + S ++
Sbjct: 916  SMHAMHIGASDAHYHQHQHQQQQNPIVRSVSQTTLTSIPTTQFGDSFGSAVSDTI 970


>AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical
            protein W03F11.6e protein.
          Length = 1039

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/55 (25%), Positives = 25/55 (45%)
 Frame = +3

Query: 291  SQHQRNVQFPNSALTMAMGQQPPPPLVRSTANTTTMNVPPQVTGTMNGHSTSQSV 455
            S H  ++   ++       QQ   P+VRS + TT  ++P    G   G + S ++
Sbjct: 914  SMHAMHIGASDAHYHQHQHQQQQNPIVRSVSQTTLTSIPTTQFGDSFGSAVSDTI 968


>AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical
            protein W03F11.6d protein.
          Length = 1184

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/55 (25%), Positives = 25/55 (45%)
 Frame = +3

Query: 291  SQHQRNVQFPNSALTMAMGQQPPPPLVRSTANTTTMNVPPQVTGTMNGHSTSQSV 455
            S H  ++   ++       QQ   P+VRS + TT  ++P    G   G + S ++
Sbjct: 914  SMHAMHIGASDAHYHQHQHQQQQNPIVRSVSQTTLTSIPTTQFGDSFGSAVSDTI 968


>AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical
            protein W03F11.6c protein.
          Length = 1419

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/55 (25%), Positives = 25/55 (45%)
 Frame = +3

Query: 291  SQHQRNVQFPNSALTMAMGQQPPPPLVRSTANTTTMNVPPQVTGTMNGHSTSQSV 455
            S H  ++   ++       QQ   P+VRS + TT  ++P    G   G + S ++
Sbjct: 914  SMHAMHIGASDAHYHQHQHQQQQNPIVRSVSQTTLTSIPTTQFGDSFGSAVSDTI 968


>AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical
            protein W03F11.6a protein.
          Length = 1658

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/55 (25%), Positives = 25/55 (45%)
 Frame = +3

Query: 291  SQHQRNVQFPNSALTMAMGQQPPPPLVRSTANTTTMNVPPQVTGTMNGHSTSQSV 455
            S H  ++   ++       QQ   P+VRS + TT  ++P    G   G + S ++
Sbjct: 914  SMHAMHIGASDAHYHQHQHQQQQNPIVRSVSQTTLTSIPTTQFGDSFGSAVSDTI 968


>AL117195-28|CAB55014.1|  458|Caenorhabditis elegans Hypothetical
           protein Y57A10A.11 protein.
          Length = 458

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
 Frame = +3

Query: 354 PPPPLVRSTANTT--TMNVPPQVTGTMNGHSTSQSVDTRKRLTPIPDINTTGN 506
           PPPP   +   TT  T       T T +  +T     T+   T  P   TTG+
Sbjct: 119 PPPPKTEAPTTTTKKTTTTTTTTTTTTSTTTTEAPTTTKTTTTRRPSTTTTGS 171


>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element
           on autosome protein2 protein.
          Length = 1758

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
 Frame = +3

Query: 213 SGSSGGAGGRPVQHXXXXXXXGFPHKSQHQRNVQFPNSALTMAMG--QQPPPPLVRSTAN 386
           +GS+ G G +  Q         +     H +N Q   S  T      Q+PPPP     ++
Sbjct: 70  TGSTNGGGQQ--QMTSMYGGNDYDQHQLHHQNQQHQASTSTQQFHHPQRPPPPQYDQPSS 127

Query: 387 TTTMNVPP 410
           +T  ++PP
Sbjct: 128 STGSSLPP 135


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,956,608
Number of Sequences: 27780
Number of extensions: 360492
Number of successful extensions: 1531
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1522
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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