Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00253
         (743 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF525673-1|AAM82611.1|   60|Anopheles gambiae cecropin CecB prot...    39   1e-04
AY146721-1|AAO12081.1|  144|Anopheles gambiae odorant-binding pr...    25   2.5  
AY146723-1|AAO12083.1|  155|Anopheles gambiae odorant-binding pr...    25   3.3  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    24   4.3  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   4.3  
AF437884-1|AAL84179.1|  144|Anopheles gambiae odorant binding pr...    24   5.7  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   7.5  

>AF525673-1|AAM82611.1|   60|Anopheles gambiae cecropin CecB
           protein.
          Length = 60

 Score = 39.1 bits (87), Expect = 1e-04
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = -2

Query: 406 MNFAKILSFV-FALVLALSMTSAAPEPRWKIFKKIEKMGRNIRDGIVKAGP 257
           MNF K+   V  A+++ + +      PRWK  K++EK+GRN+     KA P
Sbjct: 1   MNFTKLFILVAIAVLVVVGVQPVDGAPRWKFGKRLEKLGRNVFRAAKKALP 51


>AY146721-1|AAO12081.1|  144|Anopheles gambiae odorant-binding
           protein AgamOBP1 protein.
          Length = 144

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 394 KILSFVFALVLALSMTSAAPEPR 326
           K+++FVFA +L  SMT     PR
Sbjct: 2   KLVTFVFAALLCCSMTLGDTTPR 24


>AY146723-1|AAO12083.1|  155|Anopheles gambiae odorant-binding
           protein AgamOBP17 protein.
          Length = 155

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -2

Query: 394 KILSFVFALVLALSMTSAAPEPR 326
           K+++FVFA+++  SMT     PR
Sbjct: 2   KLVTFVFAVLVCCSMTLGDTTPR 24


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
 Frame = +3

Query: 537 FDRLSCVESKIISRKDTPWLHRSQQTHTIVRIG---KTPIFQYCAKH 668
           F RL+  + KI++ K  PW  R  Q    V+ G   K  ++  C  H
Sbjct: 705 FGRLADADYKIVAHKVVPWFAR--QLAEAVKAGDSVKVQVYIRCLGH 749


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
 Frame = +3

Query: 537 FDRLSCVESKIISRKDTPWLHRSQQTHTIVRIG---KTPIFQYCAKH 668
           F RL+  + KI++ K  PW   + Q    V+ G   K  ++  C  H
Sbjct: 705 FGRLADADYKIVAHKVVPWF--AHQLREAVKAGDSVKVQVYIRCLGH 749


>AF437884-1|AAL84179.1|  144|Anopheles gambiae odorant binding
           protein protein.
          Length = 144

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 394 KILSFVFALVLALSMTSAAPEPR 326
           K+++FVFA ++  SMT     PR
Sbjct: 2   KLVTFVFAALVCCSMTLGDTTPR 24


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -2

Query: 487 TGAEFGTRISTAPLVS*RPPLNLHKL 410
           TG +     S A L +  PP+ LH+L
Sbjct: 672 TGRDISPSASAAGLTTRSPPIELHEL 697


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 720,272
Number of Sequences: 2352
Number of extensions: 16306
Number of successful extensions: 26
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)