Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00253
         (743 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061516-1|AAL29064.1|  418|Drosophila melanogaster LD46870p pro...   107   2e-23
AE014297-14|AAF52166.2|  418|Drosophila melanogaster CG14641-PA ...   107   2e-23
AE014297-3923|AAF56574.1|  616|Drosophila melanogaster CG6142-PA...    32   0.95 

>AY061516-1|AAL29064.1|  418|Drosophila melanogaster LD46870p
           protein.
          Length = 418

 Score =  107 bits (256), Expect = 2e-23
 Identities = 42/51 (82%), Positives = 49/51 (96%)
 Frame = +2

Query: 590 MATSKSTNTYNRQNWEDADFPILCQTCLGDNPYIRMTKEKYGKECKICSRP 742
           M+ SK+TNTYNRQNWEDA+FPILCQTCLGDNPY+RM KE++GKECKIC+RP
Sbjct: 1   MSMSKTTNTYNRQNWEDAEFPILCQTCLGDNPYVRMIKERFGKECKICTRP 51


>AE014297-14|AAF52166.2|  418|Drosophila melanogaster CG14641-PA
           protein.
          Length = 418

 Score =  107 bits (256), Expect = 2e-23
 Identities = 42/51 (82%), Positives = 49/51 (96%)
 Frame = +2

Query: 590 MATSKSTNTYNRQNWEDADFPILCQTCLGDNPYIRMTKEKYGKECKICSRP 742
           M+ SK+TNTYNRQNWEDA+FPILCQTCLGDNPY+RM KE++GKECKIC+RP
Sbjct: 1   MSMSKTTNTYNRQNWEDAEFPILCQTCLGDNPYVRMIKERFGKECKICTRP 51


>AE014297-3923|AAF56574.1|  616|Drosophila melanogaster CG6142-PA
           protein.
          Length = 616

 Score = 31.9 bits (69), Expect = 0.95
 Identities = 14/43 (32%), Positives = 26/43 (60%)
 Frame = -2

Query: 601 RCSHGVSFLDIILDSTQLNLSNKTLLSHFYMN*ITKVFTGAEF 473
           RCS   +F+  +++   L++S K+ ++   ++ ITK  TG EF
Sbjct: 241 RCSTSKAFIQPVVNRKNLHISMKSWVTRLIIDPITKTATGVEF 283


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,906,009
Number of Sequences: 53049
Number of extensions: 599761
Number of successful extensions: 1341
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1341
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)