Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00252
(738 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P25705 Cluster: ATP synthase subunit alpha, mitochondri... 163 5e-39
UniRef50_P35381 Cluster: ATP synthase subunit alpha, mitochondri... 159 7e-38
UniRef50_A0D564 Cluster: ATP synthase subunit alpha; n=1; Parame... 137 2e-31
UniRef50_Q35058 Cluster: AtpA intron2 ORF; n=8; Embryophyta|Rep:... 129 8e-29
UniRef50_UPI00005A408F Cluster: PREDICTED: similar to ATP syntha... 125 1e-27
UniRef50_Q5FRC7 Cluster: ATP synthase subunit alpha 1; n=100; ce... 118 2e-25
UniRef50_Q29596 Cluster: ATP synthase subunit alpha liver isofor... 112 1e-23
UniRef50_P45825 Cluster: ATP synthase subunit alpha; n=47; Bacte... 105 1e-21
UniRef50_Q6A8C5 Cluster: ATP synthase subunit alpha; n=2; Bacter... 102 8e-21
UniRef50_A3FPS2 Cluster: ATP synthase subunit alpha; n=2; Crypto... 101 2e-20
UniRef50_Q0SGP7 Cluster: ATP synthase subunit alpha; n=17; cellu... 97 5e-19
UniRef50_O50140 Cluster: ATP synthase subunit alpha; n=2; Firmic... 96 9e-19
UniRef50_A6PZL5 Cluster: ATP synthase subunit alpha; n=4; Leucon... 93 9e-18
UniRef50_Q9PR12 Cluster: ATP synthase subunit alpha; n=1037; cel... 92 1e-17
UniRef50_Q9AHX2 Cluster: ATP synthase alpha subunit; n=10; Candi... 90 5e-17
UniRef50_Q21Z99 Cluster: ATP synthase subunit alpha 2; n=22; cel... 90 6e-17
UniRef50_Q4QJF1 Cluster: ATPase alpha subunit; n=9; Trypanosomat... 88 2e-16
UniRef50_A3JAC3 Cluster: F0F1 ATP synthase subunit alpha; n=3; P... 81 2e-14
UniRef50_Q9BBC2 Cluster: ATPase CF1 alpha subunit; n=4; Dinophyc... 81 2e-14
UniRef50_Q62EB0 Cluster: ATP synthase subunit alpha 2; n=25; Pro... 81 2e-14
UniRef50_Q9TAH9 Cluster: ATP synthase subunit alpha; n=1; Cafete... 81 4e-14
UniRef50_Q92FH0 Cluster: ATP synthase subunit alpha 1; n=13; Lis... 78 2e-13
UniRef50_Q1PVR1 Cluster: Strongly similar to ATPA gene encoding ... 77 6e-13
UniRef50_Q6KHZ3 Cluster: ATP synthase alpha chain; n=1; Mycoplas... 76 1e-12
UniRef50_Q603U2 Cluster: ATP synthase subunit alpha 2; n=6; Prot... 76 1e-12
UniRef50_Q9G8S6 Cluster: ATP synthase F1 subunit alpha; n=1; Nae... 73 6e-12
UniRef50_UPI0000EB1FE1 Cluster: UPI0000EB1FE1 related cluster; n... 71 2e-11
UniRef50_A5IY82 Cluster: ATP synthase alpha chain; n=6; Mycoplas... 71 2e-11
UniRef50_Q98QX5 Cluster: ATP SYNTHASE ALPHA CHAIN; n=2; Mycoplas... 70 7e-11
UniRef50_Q4A6P2 Cluster: ATP synthase alpha chain; n=2; Mycoplas... 70 7e-11
UniRef50_Q98QB7 Cluster: ATP synthase subunit alpha 2; n=1; Myco... 69 9e-11
UniRef50_Q98PM2 Cluster: ATP SYNTHASE ALPHA CHAIN; n=1; Mycoplas... 69 1e-10
UniRef50_Q9XXK1-2 Cluster: Isoform b of Q9XXK1 ; n=1; Caenorhabd... 68 3e-10
UniRef50_Q600H8 Cluster: ATP synthase alpha chain; n=3; Mycoplas... 66 1e-09
UniRef50_Q2F981 Cluster: Ribosomal protein S2; n=3; Oryza sativa... 64 3e-09
UniRef50_A0VM48 Cluster: Putative uncharacterized protein; n=3; ... 62 1e-08
UniRef50_A7DHD0 Cluster: Putative uncharacterized protein; n=2; ... 56 7e-07
UniRef50_A3L181 Cluster: ATP synthase beta chain; n=3; Gammaprot... 55 2e-06
UniRef50_Q8R9Z1 Cluster: Flagellar biosynthesis/type III secreto... 54 5e-06
UniRef50_A0NUS5 Cluster: Putative uncharacterized protein; n=1; ... 54 5e-06
UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondria... 51 3e-05
UniRef50_Q01D41 Cluster: ATP synthase alpha chain, sodium ion sp... 50 6e-05
UniRef50_Q93UD9 Cluster: ATP synthase beta subunit; n=12; Candid... 50 8e-05
UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellul... 49 1e-04
UniRef50_Q67K17 Cluster: Flagellar-specific ATP synthase; n=1; S... 48 2e-04
UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondria... 48 2e-04
UniRef50_P38168 Cluster: Putative uncharacterized protein YBL100... 47 4e-04
UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellu... 47 4e-04
UniRef50_Q6BRW4 Cluster: Debaryomyces hansenii chromosome D of s... 47 6e-04
UniRef50_Q98PM3 Cluster: ATP SYNTHASE BETA CHAIN; n=9; Mycoplasm... 46 7e-04
UniRef50_Q9RQ79 Cluster: Beta subunit of membrane-bound ATP synt... 46 7e-04
UniRef50_A5KSP4 Cluster: Sodium-transporting two-sector ATPase; ... 46 7e-04
UniRef50_A3IIS5 Cluster: Putative uncharacterized protein; n=1; ... 46 7e-04
UniRef50_A6DUD8 Cluster: F0F1 ATP synthase subunit beta; n=1; Le... 46 0.001
UniRef50_Q1GNY4 Cluster: ATPase FliI/YscN; n=6; Bacteria|Rep: AT... 45 0.002
UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondr... 45 0.002
UniRef50_Q1IR49 Cluster: ATPase FliI/YscN; n=1; Acidobacteria ba... 44 0.003
UniRef50_O83417 Cluster: Flagellum-specific ATP synthase; n=42; ... 44 0.003
UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellu... 44 0.003
UniRef50_Q1NYL2 Cluster: ATP synthase beta chain; n=1; Candidatu... 44 0.004
UniRef50_Q12T73 Cluster: ATPase FliI/YscN; n=1; Shewanella denit... 44 0.005
UniRef50_Q9RQ76 Cluster: Beta subunit of membrane-bound ATP synt... 43 0.009
UniRef50_Q6D5F7 Cluster: Type III secretion protein; n=10; Enter... 42 0.012
UniRef50_Q02C61 Cluster: ATPase, FliI/YscN family; n=2; Bacteria... 42 0.012
UniRef50_A7CYE2 Cluster: Flagellar protein export ATPase FliI; n... 42 0.012
UniRef50_P0A1B9 Cluster: Probable ATP synthase spaL; n=32; Prote... 42 0.012
UniRef50_P55717 Cluster: Probable ATP synthase y4yI; n=27; Bacte... 42 0.016
UniRef50_A5D0F3 Cluster: Flagellar biosynthesis/type III secreto... 41 0.028
UniRef50_Q971B7 Cluster: V-type ATP synthase alpha chain; n=11; ... 41 0.036
UniRef50_Q8F319 Cluster: Flagellum-specific ATP synthase fliI; n... 40 0.048
UniRef50_Q7UIJ0 Cluster: Flagellum-specific ATP synthase; n=3; P... 40 0.048
UniRef50_O07025 Cluster: Flagellum-specific ATP synthase; n=24; ... 40 0.048
UniRef50_P23445 Cluster: Flagellum-specific ATP synthase; n=18; ... 40 0.048
UniRef50_A3WGS0 Cluster: FliI, Flagellum-specific ATPase; n=2; E... 40 0.064
UniRef50_A6CBM4 Cluster: Transcription termination factor Rho; n... 40 0.084
UniRef50_Q4IW70 Cluster: ATP synthase F1, beta subunit; n=1; Azo... 39 0.11
UniRef50_A5IFJ3 Cluster: ATP synthase F1, beta chain; n=3; Legio... 39 0.11
UniRef50_A7R4X8 Cluster: Chromosome undetermined scaffold_808, w... 39 0.11
UniRef50_O67531 Cluster: Flagellum-specific ATP synthase; n=2; A... 39 0.11
UniRef50_A2WHU5 Cluster: Flagellar biosynthesis/type III secreto... 39 0.15
UniRef50_Q9PLK9 Cluster: Virulence ATPase, putative; n=9; Chlamy... 38 0.19
UniRef50_A6DIN5 Cluster: Transcription termination factor Rho; n... 38 0.19
UniRef50_Q8TUT0 Cluster: V-type ATP synthase beta chain (EC 3.6.... 38 0.19
UniRef50_Q8KKY7 Cluster: Type III secretion system ATP synthase ... 38 0.26
UniRef50_A1SEP6 Cluster: ATPase, FliI/YscN family; n=10; Bacteri... 38 0.26
UniRef50_P74857 Cluster: Probable secretion system apparatus ATP... 38 0.26
UniRef50_Q53153 Cluster: FliI protein; n=7; Rhodobacteraceae|Rep... 38 0.34
UniRef50_Q1FJZ5 Cluster: Transcription termination factor Rho; n... 38 0.34
UniRef50_A2W3Z6 Cluster: ATPase FliI/YscN; n=1; Burkholderia cen... 38 0.34
UniRef50_Q5SJE9 Cluster: Transcription termination factor Rho; n... 37 0.45
UniRef50_Q55738 Cluster: DNA gyrase subunit A; n=37; Cyanobacter... 37 0.45
UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellul... 37 0.45
UniRef50_Q74G36 Cluster: Flagellum-specific ATP synthase FliI; n... 37 0.59
UniRef50_Q62EB7 Cluster: ATP synthase F1, beta subunit; n=27; Ba... 37 0.59
UniRef50_A3Z0H3 Cluster: V-type ATPase, A subunit; n=5; Bacteria... 37 0.59
UniRef50_Q98QB6 Cluster: ATP synthase subunit beta 2; n=5; Mycop... 37 0.59
UniRef50_UPI00004D9CFE Cluster: FH1/FH2 domain-containing protei... 36 0.78
UniRef50_Q9FC33 Cluster: Putative transcription terminator facto... 36 0.78
UniRef50_Q058C4 Cluster: Flagellum-specific ATP synthase; n=1; B... 36 0.78
UniRef50_A7M2K2 Cluster: Putative uncharacterized protein; n=1; ... 36 0.78
UniRef50_P52607 Cluster: Flagellum-specific ATP synthase; n=3; B... 36 0.78
UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5; Bactero... 36 0.78
UniRef50_UPI00015B5329 Cluster: PREDICTED: similar to GA14484-PA... 36 1.0
UniRef50_Q8F7C5 Cluster: Transcription termination factor rho; n... 36 1.0
UniRef50_Q0EZL2 Cluster: Flagellum-specific ATP synthase; n=1; M... 36 1.0
UniRef50_P15313 Cluster: Vacuolar ATP synthase subunit B, kidney... 36 1.0
UniRef50_P38606 Cluster: Vacuolar ATP synthase catalytic subunit... 36 1.0
UniRef50_P84582 Cluster: ATP synthase subunit alpha; n=1; Populu... 36 1.0
UniRef50_UPI0000E823B4 Cluster: PREDICTED: similar to vacuolar p... 36 1.4
UniRef50_Q6KIC3 Cluster: ATP synthase beta chain; n=1; Mycoplasm... 36 1.4
UniRef50_Q2IQ94 Cluster: Sodium-transporting two-sector ATPase; ... 36 1.4
UniRef50_A0Z379 Cluster: ATPase FliI/YscN; n=1; marine gamma pro... 36 1.4
UniRef50_Q8ZXR2 Cluster: V-type ATP synthase beta chain; n=5; Ar... 36 1.4
UniRef50_A3ZQF8 Cluster: Transcription termination factor Rho; n... 35 1.8
UniRef50_A7DBR8 Cluster: Transport system permease protein; n=3;... 35 2.4
UniRef50_Q25691 Cluster: Vacuolar ATP synthase subunit B; n=25; ... 35 2.4
UniRef50_P45835 Cluster: Transcription termination factor rho; n... 35 2.4
UniRef50_Q4RR34 Cluster: Chromosome 14 SCAF15003, whole genome s... 34 3.2
UniRef50_Q8NR58 Cluster: Transcription termination factor; n=3; ... 34 3.2
UniRef50_A7CZI2 Cluster: H+transporting two-sector ATPase alpha/... 34 3.2
UniRef50_A1EBU5 Cluster: SctN; n=1; Lysobacter enzymogenes|Rep: ... 34 3.2
UniRef50_Q9PK86 Cluster: V-type ATP synthase beta chain; n=19; B... 34 3.2
UniRef50_P52157 Cluster: Transcription termination factor rho; n... 34 3.2
UniRef50_O67031 Cluster: Transcription termination factor rho; n... 34 3.2
UniRef50_Q08637 Cluster: V-type sodium ATP synthase subunit B (E... 34 3.2
UniRef50_Q52371 Cluster: Type III secretion ATP synthase hrcN; n... 34 3.2
UniRef50_P26465 Cluster: Flagellum-specific ATP synthase; n=258;... 34 3.2
UniRef50_UPI00005F655A Cluster: COG1157: Flagellar biosynthesis/... 34 4.2
UniRef50_Q9MTQ2 Cluster: ATP synthase subunit beta; n=2; Amphidi... 34 4.2
UniRef50_A6RD01 Cluster: Putative uncharacterized protein; n=1; ... 34 4.2
UniRef50_Q141X8 Cluster: ATPase FliI/YscN; n=1; Burkholderia xen... 33 5.5
UniRef50_A6VWI3 Cluster: H+transporting two-sector ATPase alpha/... 33 5.5
UniRef50_A3SFS3 Cluster: Flagellum-specific ATP synthase; n=2; S... 33 5.5
UniRef50_A1T0I0 Cluster: ATPase, FliI/YscN family protein; n=1; ... 33 5.5
UniRef50_Q85X23 Cluster: ORF56b; n=1; Pinus koraiensis|Rep: ORF5... 33 5.5
UniRef50_A5B5Q4 Cluster: Putative uncharacterized protein; n=1; ... 33 5.5
UniRef50_UPI00015B4CD4 Cluster: PREDICTED: similar to ENSANGP000... 33 7.3
UniRef50_Q8A876 Cluster: V-type ATP synthase subunit B; n=9; Bac... 33 7.3
UniRef50_Q81SH1 Cluster: Flagellum-specific ATP synthase, putati... 33 7.3
UniRef50_Q5LWX0 Cluster: H+-transporting two-sector ATPase, flag... 33 7.3
UniRef50_Q2SEY6 Cluster: Flagellum-specific ATP synthase; n=1; H... 33 7.3
UniRef50_Q2S040 Cluster: Transcription termination factor rho; n... 33 7.3
UniRef50_Q9F696 Cluster: Flagella-specific ATPase; n=16; Alphapr... 33 7.3
UniRef50_Q1AVG2 Cluster: Transcription termination factor Rho; n... 33 7.3
UniRef50_A4M4Z8 Cluster: Putative uncharacterized protein; n=1; ... 33 7.3
UniRef50_A2WHW2 Cluster: Flagellar biosynthesis/type III secreto... 33 7.3
UniRef50_A7PWU3 Cluster: Chromosome chr19 scaffold_35, whole gen... 33 7.3
UniRef50_Q5CS50 Cluster: Putative uncharacterized protein; n=2; ... 33 7.3
UniRef50_Q98QX4 Cluster: ATP SYNTHASE BETA CHAIN; n=1; Mycoplasm... 33 9.7
UniRef50_Q7URK7 Cluster: Excinuclease ABC subunit A; n=1; Pirell... 33 9.7
UniRef50_Q3IUV2 Cluster: TraG; n=1; Rhodobacter sphaeroides 2.4.... 33 9.7
UniRef50_Q2S0E2 Cluster: Transcription termination factor Rho; n... 33 9.7
UniRef50_Q2RXS1 Cluster: Putative uncharacterized protein precur... 33 9.7
UniRef50_A6VUA3 Cluster: Positive regulator of sigma E, RseC/Muc... 33 9.7
UniRef50_A6Q2N1 Cluster: Flagellar-specific ATP synthase FliI; n... 33 9.7
UniRef50_A5GCR1 Cluster: H+-transporting two-sector ATPase, alph... 33 9.7
UniRef50_A2BND1 Cluster: DNA gyrase/topoisomerase IV, subunit A;... 33 9.7
UniRef50_A2F8P6 Cluster: ABC transporter family protein; n=1; Tr... 33 9.7
UniRef50_Q4PCL5 Cluster: Putative uncharacterized protein; n=1; ... 33 9.7
UniRef50_O94034 Cluster: Nucleotide phosphodiesterase; n=4; Sacc... 33 9.7
UniRef50_O83541 Cluster: V-type ATP synthase alpha chain 2; n=7;... 33 9.7
UniRef50_Q92HL2 Cluster: Transcription termination factor rho; n... 33 9.7
>UniRef50_P25705 Cluster: ATP synthase subunit alpha, mitochondrial
precursor; n=489; cellular organisms|Rep: ATP synthase
subunit alpha, mitochondrial precursor - Homo sapiens
(Human)
Length = 553
Score = 163 bits (395), Expect = 5e-39
Identities = 77/89 (86%), Positives = 85/89 (95%)
Frame = +2
Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427
L ++QAEEMVEFSSGLKGM+LNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGE++
Sbjct: 87 LRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEEL 146
Query: 428 LGRVVDALGNPIDGKGPIDTKSRMRVGLR 514
LGRVVDALGN IDGKGPI +K+R RVGL+
Sbjct: 147 LGRVVDALGNAIDGKGPIGSKTRRRVGLK 175
Score = 144 bits (349), Expect = 2e-33
Identities = 68/76 (89%), Positives = 72/76 (94%)
Frame = +1
Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690
KAP IIPR+SVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKT++AIDTIINQ+RFN
Sbjct: 175 KAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFND 234
Query: 691 GEDEKKKLYCIYVVIG 738
G DEKKKLYCIYV IG
Sbjct: 235 GSDEKKKLYCIYVAIG 250
Score = 87.0 bits (206), Expect = 4e-16
Identities = 47/88 (53%), Positives = 57/88 (64%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 LISARIAGSVARRLPNAATQVSKXXXXXXXXXSRKLHVSTTHK----AAEISTILEERIL 170
++S R+A +V R LP A VS+ +R H S TH AE+S+ILEERIL
Sbjct: 1 MLSVRVAAAVVRALPRRAGLVSRNALGSSFIAARNFHASNTHLQKTGTAEMSSILEERIL 60
Query: 171 GAAPKADLEETGRVLSIGDGIARVYGLK 254
GA DLEETGRVLSIGDGIARV+GL+
Sbjct: 61 GADTSVDLEETGRVLSIGDGIARVHGLR 88
>UniRef50_P35381 Cluster: ATP synthase subunit alpha, mitochondrial
precursor; n=847; cellular organisms|Rep: ATP synthase
subunit alpha, mitochondrial precursor - Drosophila
melanogaster (Fruit fly)
Length = 552
Score = 159 bits (386), Expect = 7e-38
Identities = 75/89 (84%), Positives = 84/89 (94%)
Frame = +2
Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427
L +IQA+EMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIK+GDIVKRTGAIVDVPVG+++
Sbjct: 86 LNNIQADEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKQGDIVKRTGAIVDVPVGDEL 145
Query: 428 LGRVVDALGNPIDGKGPIDTKSRMRVGLR 514
LGRVVDALGN IDGKG I+TK R RVG++
Sbjct: 146 LGRVVDALGNAIDGKGAINTKDRFRVGIK 174
Score = 144 bits (348), Expect = 3e-33
Identities = 69/76 (90%), Positives = 72/76 (94%)
Frame = +1
Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690
KAP IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQ+RFN+
Sbjct: 174 KAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKRFNE 233
Query: 691 GEDEKKKLYCIYVVIG 738
+DE KKLYCIYV IG
Sbjct: 234 AQDESKKLYCIYVAIG 249
Score = 111 bits (267), Expect = 2e-23
Identities = 58/84 (69%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
Frame = +3
Query: 3 LISARIAGSVARRLPNAATQVS-KXXXXXXXXXSRKLHVSTTHKAAEISTILEERILGAA 179
+ SAR+A SVAR LP AA QV+ K +RKLHV++T ++AEIS ILEERILG A
Sbjct: 3 IFSARLASSVARNLPKAANQVACKAAYPAASLAARKLHVASTQRSAEISNILEERILGVA 62
Query: 180 PKADLEETGRVLSIGDGIARVYGL 251
PKADLEETGRVLSIGDGIARVYGL
Sbjct: 63 PKADLEETGRVLSIGDGIARVYGL 86
>UniRef50_A0D564 Cluster: ATP synthase subunit alpha; n=1;
Paramecium tetraurelia|Rep: ATP synthase subunit alpha -
Paramecium tetraurelia
Length = 612
Score = 137 bits (332), Expect = 2e-31
Identities = 64/89 (71%), Positives = 76/89 (85%)
Frame = +2
Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427
L +QA EMVEFSSG++GMALNLE DNVG+VV GND+ I+EGDIVKRTGAIVDVP+G ++
Sbjct: 67 LTQVQAGEMVEFSSGVRGMALNLETDNVGIVVLGNDREIQEGDIVKRTGAIVDVPIGMEM 126
Query: 428 LGRVVDALGNPIDGKGPIDTKSRMRVGLR 514
LGRV DALGNPIDG GP+ T +R RV L+
Sbjct: 127 LGRVFDALGNPIDGHGPVKTNTRRRVELK 155
Score = 121 bits (291), Expect = 2e-26
Identities = 61/77 (79%), Positives = 67/77 (87%), Gaps = 1/77 (1%)
Frame = +1
Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQ-RFN 687
KAP IIPR SV EPMQTG+KAVD LVPIGRGQRELIIGDRQTGKTA+AIDTIINQ+ F+
Sbjct: 155 KAPGIIPRKSVHEPMQTGLKAVDCLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKPNFD 214
Query: 688 KGEDEKKKLYCIYVVIG 738
G D+ K+LYCIYV IG
Sbjct: 215 SG-DKNKQLYCIYVAIG 230
Score = 35.9 bits (79), Expect = 1.0
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = +3
Query: 189 DLEETGRVLSIGDGIARVYGL 251
D++E G V+SIGDGIARV+GL
Sbjct: 47 DIKEYGTVISIGDGIARVFGL 67
>UniRef50_Q35058 Cluster: AtpA intron2 ORF; n=8; Embryophyta|Rep:
AtpA intron2 ORF - Marchantia polymorpha (Liverwort)
Length = 1259
Score = 129 bits (311), Expect = 8e-29
Identities = 62/89 (69%), Positives = 74/89 (83%)
Frame = +2
Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427
L IQA EMVEF+SG+KGMALNLE +NVG+V+FG+D IKEGDIVKRTG+IVDVPVG+ +
Sbjct: 45 LNKIQAGEMVEFASGVKGMALNLENENVGIVIFGSDTAIKEGDIVKRTGSIVDVPVGKGM 104
Query: 428 LGRVVDALGNPIDGKGPIDTKSRMRVGLR 514
LGRVVDALG PIDGKG + R RV ++
Sbjct: 105 LGRVVDALGVPIDGKGALSAVERRRVEVK 133
Score = 121 bits (291), Expect = 2e-26
Identities = 58/77 (75%), Positives = 67/77 (87%), Gaps = 1/77 (1%)
Frame = +1
Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFN- 687
KAP II R SV EPMQTG+KAVDSLVPIGRGQRELIIGDRQTGKTA+AIDTI+NQ++ N
Sbjct: 133 KAPGIIARKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINA 192
Query: 688 KGEDEKKKLYCIYVVIG 738
+G + +KLYC+YV IG
Sbjct: 193 QGTSDSEKLYCVYVAIG 209
Score = 53.2 bits (122), Expect = 6e-06
Identities = 24/39 (61%), Positives = 31/39 (79%)
Frame = +3
Query: 135 AEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGL 251
AE+ST+LE+RI K ++E GRV+S+GDGIARVYGL
Sbjct: 7 AELSTLLEQRITNYYTKLQVDEIGRVVSVGDGIARVYGL 45
>UniRef50_UPI00005A408F Cluster: PREDICTED: similar to ATP synthase
alpha chain, mitochondrial precursor; n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to ATP synthase alpha
chain, mitochondrial precursor - Canis familiaris
Length = 301
Score = 125 bits (302), Expect = 1e-27
Identities = 60/76 (78%), Positives = 66/76 (86%)
Frame = +1
Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690
K P IIP +SVREPM+TGIKAVDSLVPIGRGQ ELII + QTGKT++AIDTIINQ+ N
Sbjct: 71 KGPGIIPPISVREPMKTGIKAVDSLVPIGRGQHELIISNWQTGKTSIAIDTIINQKHLND 130
Query: 691 GEDEKKKLYCIYVVIG 738
G DEKKKLYCIYVVIG
Sbjct: 131 GTDEKKKLYCIYVVIG 146
Score = 111 bits (267), Expect = 2e-23
Identities = 53/71 (74%), Positives = 60/71 (84%)
Frame = +2
Query: 302 MALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 481
M+LNL PD VGVVVFGNDKLIKEGDIVKRT A VDVPVG+++ G VVDALGN DGKGPI
Sbjct: 1 MSLNLGPDKVGVVVFGNDKLIKEGDIVKRTEATVDVPVGKELPGHVVDALGNATDGKGPI 60
Query: 482 DTKSRMRVGLR 514
+K+ RVGL+
Sbjct: 61 GSKTHRRVGLK 71
>UniRef50_Q5FRC7 Cluster: ATP synthase subunit alpha 1; n=100;
cellular organisms|Rep: ATP synthase subunit alpha 1 -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 511
Score = 118 bits (284), Expect = 2e-25
Identities = 56/76 (73%), Positives = 63/76 (82%)
Frame = +1
Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690
KAP I+PR SV EPMQTGIKA+D+LVPIGRGQRELIIGDRQTGKTA+ IDTI+ Q+ N
Sbjct: 133 KAPGIMPRQSVSEPMQTGIKAIDALVPIGRGQRELIIGDRQTGKTAILIDTIVAQKPVNA 192
Query: 691 GEDEKKKLYCIYVVIG 738
D KK LYCIYV +G
Sbjct: 193 EGDPKKSLYCIYVAVG 208
Score = 109 bits (261), Expect = 9e-23
Identities = 52/79 (65%), Positives = 65/79 (82%), Gaps = 1/79 (1%)
Frame = +2
Query: 248 LEDIQAEEMVEFS-SGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQ 424
L ++ A EMVEF +GLKGMALNLE DNVGVV+FG+ I+EGD V RT ++V+VPVG+
Sbjct: 44 LTNVMAGEMVEFEGTGLKGMALNLEADNVGVVLFGDGDSIREGDTVLRTKSVVEVPVGKG 103
Query: 425 ILGRVVDALGNPIDGKGPI 481
+LGRVVD LGNPIDG+GP+
Sbjct: 104 LLGRVVDGLGNPIDGRGPL 122
Score = 47.2 bits (107), Expect = 4e-04
Identities = 24/41 (58%), Positives = 29/41 (70%)
Frame = +3
Query: 129 KAAEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGL 251
+ AEIS IL+++I + ETG VLSIGDGIARVYGL
Sbjct: 4 RPAEISDILKQQIASFDQVETVSETGTVLSIGDGIARVYGL 44
>UniRef50_Q29596 Cluster: ATP synthase subunit alpha liver isoform,
mitochondrial precursor; n=20; cellular organisms|Rep:
ATP synthase subunit alpha liver isoform, mitochondrial
precursor - Sus scrofa (Pig)
Length = 148
Score = 112 bits (269), Expect = 1e-23
Identities = 53/58 (91%), Positives = 56/58 (96%)
Frame = +2
Query: 260 QAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILG 433
QAEEMVEFSSGLKGM+LNLEPDNVGVVVFGNDKLIKEGDIVKRTG IVDVPVG+ +LG
Sbjct: 91 QAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGXIVDVPVGKDLLG 148
Score = 82.6 bits (195), Expect = 9e-15
Identities = 46/88 (52%), Positives = 55/88 (62%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 LISARIAGSVARRLPNAATQVSKXXXXXXXXXSRKLHVSTTHK----AAEISTILEERIL 170
++S R+A +VAR LP A VSK + LH S T AE+S+ILE RIL
Sbjct: 1 MLSVRVAAAVARXLPRRAGXVSKNALGSSFVAAXNLHASNTRLQKTGTAEVSSILEXRIL 60
Query: 171 GAAPKADLEETGRVLSIGDGIARVYGLK 254
GA DLEETGRVLSIGDGIARV+G +
Sbjct: 61 GADTSVDLEETGRVLSIGDGIARVHGXR 88
>UniRef50_P45825 Cluster: ATP synthase subunit alpha; n=47;
Bacteria|Rep: ATP synthase subunit alpha - Mycobacterium
leprae
Length = 558
Score = 105 bits (251), Expect = 1e-21
Identities = 47/96 (48%), Positives = 70/96 (72%)
Frame = +1
Query: 451 GKPY*WQGTNRHEIPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDR 630
G+P +G E +AP ++ R SV+EP+QTGIKA+D++ PIGRGQR+L+IGDR
Sbjct: 115 GQPIDGRGDIEAEARRALELQAPSVVQRQSVKEPLQTGIKAIDAMTPIGRGQRQLVIGDR 174
Query: 631 QTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVVIG 738
+TGKTA+ +DTI+NQ++ + D K+++ C+YV IG
Sbjct: 175 KTGKTAVCVDTILNQRQNWESGDPKRQVRCVYVAIG 210
Score = 95.5 bits (227), Expect = 1e-18
Identities = 43/89 (48%), Positives = 63/89 (70%)
Frame = +2
Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427
L + +E++EF G+ G+ALNL+ NVG V+ G+ + IKEG VKRTG ++ VPVGE
Sbjct: 47 LPSVMTQELLEFPGGILGVALNLDEHNVGAVILGDFENIKEGQKVKRTGDVLSVPVGEAF 106
Query: 428 LGRVVDALGNPIDGKGPIDTKSRMRVGLR 514
+GRVV+ LG PIDG+G I+ ++R + L+
Sbjct: 107 MGRVVNPLGQPIDGRGDIEAEARRALELQ 135
>UniRef50_Q6A8C5 Cluster: ATP synthase subunit alpha; n=2;
Bacteria|Rep: ATP synthase subunit alpha -
Propionibacterium acnes
Length = 545
Score = 102 bits (245), Expect = 8e-21
Identities = 46/72 (63%), Positives = 61/72 (84%)
Frame = +1
Query: 523 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDE 702
++ R VREP+QTG+KA+DS++PIGRGQR+LIIGDR+TGKTA+AIDTIINQ+ + D
Sbjct: 141 VMDRQEVREPLQTGLKAIDSMIPIGRGQRQLIIGDRKTGKTAIAIDTIINQKGNWESGDP 200
Query: 703 KKKLYCIYVVIG 738
+K++ CIYV IG
Sbjct: 201 QKQVRCIYVAIG 212
Score = 86.6 bits (205), Expect = 6e-16
Identities = 41/78 (52%), Positives = 52/78 (66%)
Frame = +2
Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427
L A E++ F +G G+ALNLE +GVVV G+ I EG V+ TG ++ VPVGE
Sbjct: 48 LPSAMANELLRFENGTMGIALNLEERQIGVVVLGDSDGIDEGSTVRGTGEVLSVPVGEGY 107
Query: 428 LGRVVDALGNPIDGKGPI 481
LGRVVDA+GNP+DG G I
Sbjct: 108 LGRVVDAMGNPVDGLGEI 125
>UniRef50_A3FPS2 Cluster: ATP synthase subunit alpha; n=2;
Cryptosporidium|Rep: ATP synthase subunit alpha -
Cryptosporidium parvum Iowa II
Length = 639
Score = 101 bits (241), Expect = 2e-20
Identities = 47/89 (52%), Positives = 66/89 (74%)
Frame = +2
Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427
+ ++ E+VEFSSG KGMALNLE D+VG+V+ G D+ I++GD V T IV+ PVG+++
Sbjct: 166 IRSVKYGELVEFSSGEKGMALNLENDHVGIVILGEDRNIRKGDQVISTNTIVNCPVGKEL 225
Query: 428 LGRVVDALGNPIDGKGPIDTKSRMRVGLR 514
LGRVVDALGNPIDGK I + + + ++
Sbjct: 226 LGRVVDALGNPIDGKPSIISLEKREIDVK 254
Score = 92.7 bits (220), Expect = 9e-18
Identities = 44/76 (57%), Positives = 57/76 (75%)
Frame = +1
Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690
KAP I+ R + E + TGIK +DSL+PIG GQRE I+GDRQTGKT+L +D I+NQ++F
Sbjct: 254 KAPGIMDRKPINEQLITGIKFIDSLIPIGLGQREAIVGDRQTGKTSLVLDIILNQRKFY- 312
Query: 691 GEDEKKKLYCIYVVIG 738
+D K + YCIYV IG
Sbjct: 313 -DDIKTRKYCIYVAIG 327
>UniRef50_Q0SGP7 Cluster: ATP synthase subunit alpha; n=17; cellular
organisms|Rep: ATP synthase subunit alpha - Rhodococcus
sp. (strain RHA1)
Length = 547
Score = 96.7 bits (230), Expect = 5e-19
Identities = 43/76 (56%), Positives = 60/76 (78%)
Frame = +1
Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690
+A ++ R V EP+QTGIKA+D++ PIGRGQR+L+IGDR+TGKTA+ ID I+NQ+ +
Sbjct: 135 QAASVLERQPVEEPLQTGIKAIDAMTPIGRGQRQLVIGDRKTGKTAVCIDAILNQKANWE 194
Query: 691 GEDEKKKLYCIYVVIG 738
DEK+++ CIYV IG
Sbjct: 195 TGDEKQQVRCIYVAIG 210
Score = 85.0 bits (201), Expect = 2e-15
Identities = 39/89 (43%), Positives = 58/89 (65%)
Frame = +2
Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427
L A E++EF G+ G+ALNL+ +G V+ G+ + I+EG VKRTG ++ VPVG+
Sbjct: 47 LPSAMANELLEFPGGILGVALNLDATEIGAVILGDYENIQEGQEVKRTGDVLSVPVGDAF 106
Query: 428 LGRVVDALGNPIDGKGPIDTKSRMRVGLR 514
LGRV++ LG PIDG G I++ + L+
Sbjct: 107 LGRVINPLGQPIDGLGEIESNETRALELQ 135
>UniRef50_O50140 Cluster: ATP synthase subunit alpha; n=2;
Firmicutes|Rep: ATP synthase subunit alpha -
Ruminococcus albus
Length = 523
Score = 95.9 bits (228), Expect = 9e-19
Identities = 48/80 (60%), Positives = 59/80 (73%)
Frame = +2
Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427
LE + E++EF +G GMA+NLE D VG V+ G ++ I+EG VKRTG IV VPVGE +
Sbjct: 44 LEKCMSGELLEFENGTYGMAMNLEQDFVGCVLLGTEEGIREGSNVKRTGRIVSVPVGEAM 103
Query: 428 LGRVVDALGNPIDGKGPIDT 487
LGRVV+ALG PIDGKG I T
Sbjct: 104 LGRVVNALGAPIDGKGAILT 123
Score = 94.7 bits (225), Expect = 2e-18
Identities = 48/72 (66%), Positives = 56/72 (77%)
Frame = +1
Query: 523 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDE 702
II R SV P+QTGIKA+DS++P+GRGQRELIIGDRQTGKT +A+DTIINQ KG
Sbjct: 136 IITRKSVNRPLQTGIKAIDSMIPVGRGQRELIIGDRQTGKTTIALDTIINQ----KG--- 188
Query: 703 KKKLYCIYVVIG 738
K + CIYV IG
Sbjct: 189 -KNVICIYVAIG 199
>UniRef50_A6PZL5 Cluster: ATP synthase subunit alpha; n=4;
Leuconostocaceae|Rep: ATP synthase subunit alpha -
Leuconostoc durionis
Length = 297
Score = 92.7 bits (220), Expect = 9e-18
Identities = 47/76 (61%), Positives = 60/76 (78%)
Frame = +1
Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690
KAP ++ R SV EP+QTGIKA+D+LVPIGRGQRELIIGDR+TGKT++A+DTI+NQ K
Sbjct: 95 KAPGVMARKSVSEPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSIAVDTILNQ----K 150
Query: 691 GEDEKKKLYCIYVVIG 738
+D + IYV +G
Sbjct: 151 DQD----MIVIYVAVG 162
Score = 92.3 bits (219), Expect = 1e-17
Identities = 40/73 (54%), Positives = 57/73 (78%)
Frame = +2
Query: 269 EMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDA 448
E+V F++G GM NLE VG++V G+ + I+EGD VKRTG +++VPVGE+++GRVV+A
Sbjct: 14 ELVTFNNGAYGMVQNLEESEVGIIVLGSSEGIREGDTVKRTGHVMEVPVGEELIGRVVNA 73
Query: 449 LGNPIDGKGPIDT 487
LG PIDG G ++T
Sbjct: 74 LGQPIDGLGDLNT 86
>UniRef50_Q9PR12 Cluster: ATP synthase subunit alpha; n=1037;
cellular organisms|Rep: ATP synthase subunit alpha -
Ureaplasma parvum (Ureaplasma urealyticum biotype 1)
Length = 799
Score = 92.3 bits (219), Expect = 1e-17
Identities = 45/78 (57%), Positives = 58/78 (74%)
Frame = +2
Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427
L+++ E+V F +G++GMALNLE D VGVV+ G+ IKEGD V RT IV+VPVG+ +
Sbjct: 45 LDNVMLNEIVRFENGVEGMALNLEEDAVGVVLLGDYSNIKEGDRVYRTKRIVEVPVGDVM 104
Query: 428 LGRVVDALGNPIDGKGPI 481
LGRVVDALG +D KG I
Sbjct: 105 LGRVVDALGKAVDNKGNI 122
Score = 84.6 bits (200), Expect = 2e-15
Identities = 42/75 (56%), Positives = 56/75 (74%)
Frame = +1
Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 693
AP ++ R SV +P++TGI ++D++ PIG+GQRELIIGDRQTGKT +AID IINQ KG
Sbjct: 134 APGVMDRKSVHQPLETGILSIDAMFPIGKGQRELIIGDRQTGKTTIAIDAIINQ----KG 189
Query: 694 EDEKKKLYCIYVVIG 738
+ + C+YV IG
Sbjct: 190 ----RNVNCVYVAIG 200
>UniRef50_Q9AHX2 Cluster: ATP synthase alpha subunit; n=10;
Candidatus Carsonella ruddii|Rep: ATP synthase alpha
subunit - Carsonella ruddii
Length = 481
Score = 90.2 bits (214), Expect = 5e-17
Identities = 43/75 (57%), Positives = 56/75 (74%)
Frame = +1
Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 693
AP ++ R +V EP+ TGIK++DS++PIG+GQRELIIGDRQTGKT + IDTIINQ
Sbjct: 109 APGVMDRETVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTICIDTIINQ------ 162
Query: 694 EDEKKKLYCIYVVIG 738
+ K + C+YV IG
Sbjct: 163 --KNKNIICVYVCIG 175
Score = 57.2 bits (132), Expect = 4e-07
Identities = 24/75 (32%), Positives = 46/75 (61%)
Frame = +2
Query: 242 LWLEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGE 421
L L++ + EM+ FS +KG+ +L NV +++ N + +G+ T I +VPVG+
Sbjct: 18 LGLKNAKYGEMILFSKNIKGIVFSLNKKNVNIIILNNYNELTQGEKCYCTNKIFEVPVGK 77
Query: 422 QILGRVVDALGNPID 466
Q++GR++++ G +D
Sbjct: 78 QLIGRIINSRGETLD 92
>UniRef50_Q21Z99 Cluster: ATP synthase subunit alpha 2; n=22;
cellular organisms|Rep: ATP synthase subunit alpha 2 -
Rhodoferax ferrireducens (strain DSM 15236 / ATCC
BAA-621 / T118)
Length = 534
Score = 89.8 bits (213), Expect = 6e-17
Identities = 49/98 (50%), Positives = 66/98 (67%), Gaps = 2/98 (2%)
Frame = +1
Query: 451 GKPY*WQG--TNRHEIPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIG 624
G+P +G + H +P E R +PI+ R V P+QTG+K +D+L+P+GRGQRELI+G
Sbjct: 118 GRPLDGRGPVASSHRLPIE-RPASPIM-DRAPVTVPLQTGLKVIDALIPVGRGQRELILG 175
Query: 625 DRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVVIG 738
DRQTGKTA+AIDTI+NQQ N + C+Y IG
Sbjct: 176 DRQTGKTAIAIDTILNQQGQN--------VLCVYCAIG 205
Score = 79.0 bits (186), Expect = 1e-13
Identities = 35/86 (40%), Positives = 56/86 (65%)
Frame = +2
Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427
L + +E+V+F L G+A N++ +GVV+ G + GD V RTG ++DV VG+ +
Sbjct: 50 LPGVGFDELVKFPGDLFGIAFNVDEAEIGVVLLGEYWHLHAGDEVDRTGRVMDVAVGDGL 109
Query: 428 LGRVVDALGNPIDGKGPIDTKSRMRV 505
LGRV+D LG P+DG+GP+ + R+ +
Sbjct: 110 LGRVIDPLGRPLDGRGPVASSHRLPI 135
>UniRef50_Q4QJF1 Cluster: ATPase alpha subunit; n=9;
Trypanosomatidae|Rep: ATPase alpha subunit - Leishmania
major
Length = 574
Score = 87.8 bits (208), Expect = 2e-16
Identities = 43/75 (57%), Positives = 54/75 (72%)
Frame = +1
Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 693
AP I+ R V + TG KAVD+++PIGRGQRELI+GDRQTGKT++A+ TIINQ R N+
Sbjct: 160 APNIVSRSPVNYNLLTGFKAVDTMIPIGRGQRELIVGDRQTGKTSIAVSTIINQVRSNQQ 219
Query: 694 EDEKKKLYCIYVVIG 738
K + IYV IG
Sbjct: 220 ILSKNAVISIYVSIG 234
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +2
Query: 299 GMALNLEPDN-VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPI 463
G+ NLE D +G+++ N ++ G V TG ++ +PVG +LG+VV+ LG+ +
Sbjct: 80 GLVFNLEKDGRIGIILMDNITEVQSGQKVMATGKLLYIPVGAGVLGKVVNPLGHEV 135
>UniRef50_A3JAC3 Cluster: F0F1 ATP synthase subunit alpha; n=3;
Proteobacteria|Rep: F0F1 ATP synthase subunit alpha -
Marinobacter sp. ELB17
Length = 549
Score = 81.4 bits (192), Expect = 2e-14
Identities = 39/76 (51%), Positives = 55/76 (72%)
Frame = +1
Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690
+AP ++ R ++ +P+ TGIKA+D+ VP+G GQRELIIGDRQTGKT++A+DT++NQ R
Sbjct: 168 EAPGVLSRSAIFKPLATGIKAIDAAVPVGLGQRELIIGDRQTGKTSIAVDTMLNQIR--- 224
Query: 691 GEDEKKKLYCIYVVIG 738
+ CIY IG
Sbjct: 225 -----SDVICIYCAIG 235
Score = 77.4 bits (182), Expect = 3e-13
Identities = 35/73 (47%), Positives = 54/73 (73%)
Frame = +2
Query: 263 AEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVV 442
A+E++ F+SG++G+ L+LEP +GV++ G + I+ G+ V+RT ++ VPVG +LGRVV
Sbjct: 85 ADELLIFASGVRGIVLDLEPGRLGVILLGPSEHIRLGEDVRRTRKVISVPVGPALLGRVV 144
Query: 443 DALGNPIDGKGPI 481
DA+G P DG G I
Sbjct: 145 DAVGLPRDGLGVI 157
>UniRef50_Q9BBC2 Cluster: ATPase CF1 alpha subunit; n=4;
Dinophyceae|Rep: ATPase CF1 alpha subunit - Amphidinium
carterae (Dinoflagellate)
Length = 464
Score = 81.4 bits (192), Expect = 2e-14
Identities = 35/53 (66%), Positives = 46/53 (86%)
Frame = +1
Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIIN 672
AP I+ R SV EP+ TGI ++D+++PIGRGQRELIIGDRQTGKT++ +DTI+N
Sbjct: 108 APSIVSRQSVCEPLATGIVSIDAMIPIGRGQRELIIGDRQTGKTSICLDTIVN 160
>UniRef50_Q62EB0 Cluster: ATP synthase subunit alpha 2; n=25;
Proteobacteria|Rep: ATP synthase subunit alpha 2 -
Burkholderia mallei (Pseudomonas mallei)
Length = 670
Score = 81.4 bits (192), Expect = 2e-14
Identities = 45/85 (52%), Positives = 54/85 (63%)
Frame = +1
Query: 484 HEIPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDT 663
H +P E AP II R V EP+ TG+ VD+L IGRGQRELIIGDR TGKT+LAID
Sbjct: 136 HTLPIERA--APAIIERDLVSEPLDTGVLIVDALFTIGRGQRELIIGDRATGKTSLAIDA 193
Query: 664 IINQQRFNKGEDEKKKLYCIYVVIG 738
I+NQ+ + C+YV IG
Sbjct: 194 IVNQRH--------SDVICVYVAIG 210
Score = 77.0 bits (181), Expect = 5e-13
Identities = 35/79 (44%), Positives = 49/79 (62%)
Frame = +2
Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427
LED E++ F G+ G A L+ D + VV+ D ++ V RTGA+++VP G Q+
Sbjct: 55 LEDTMLNEVLRFEGGVTGFAHTLDEDLISVVLLDPDAGVRAQTAVARTGAVLEVPAGPQL 114
Query: 428 LGRVVDALGNPIDGKGPID 484
LGRVVD LG P+DG P+D
Sbjct: 115 LGRVVDPLGRPLDGGAPLD 133
>UniRef50_Q9TAH9 Cluster: ATP synthase subunit alpha; n=1; Cafeteria
roenbergensis|Rep: ATP synthase subunit alpha -
Cafeteria roenbergensis
Length = 601
Score = 80.6 bits (190), Expect = 4e-14
Identities = 39/60 (65%), Positives = 47/60 (78%)
Frame = +1
Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690
+AP II R SV +P+ TG+ VDS+VPIG GQRELIIGDRQ GKTA+AID I+NQ N+
Sbjct: 189 QAPGIIVRKSVNKPLLTGLNCVDSMVPIGLGQRELIIGDRQVGKTAVAIDMILNQAFLNE 248
Score = 60.1 bits (139), Expect = 6e-08
Identities = 25/58 (43%), Positives = 41/58 (70%)
Frame = +2
Query: 293 LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 466
++GM + +E D + V++FG+++ +K GD V+ G IV + VG +LGRV+D LGN +D
Sbjct: 96 VEGMVVGIEQDYISVIIFGDERFVKVGDRVRPRGNIVAINVGIGLLGRVIDPLGNVLD 153
>UniRef50_Q92FH0 Cluster: ATP synthase subunit alpha 1; n=13;
Listeria|Rep: ATP synthase subunit alpha 1 - Listeria
innocua
Length = 498
Score = 78.2 bits (184), Expect = 2e-13
Identities = 38/74 (51%), Positives = 51/74 (68%)
Frame = +1
Query: 517 PIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGE 696
P I+ SV P+ TG+ +DS+ PIGRGQR+LI+G+RQ+GKT +A+DTIINQ N
Sbjct: 129 PAIMTIDSVTRPLNTGLAVIDSITPIGRGQRQLILGNRQSGKTQIAVDTIINQHNQN--- 185
Query: 697 DEKKKLYCIYVVIG 738
++CIYV IG
Sbjct: 186 -----VHCIYVAIG 194
Score = 33.9 bits (74), Expect = 4.2
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +2
Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427
LE+ + V +G+ L L + VG+ + I EG V T ++V + E +
Sbjct: 39 LENAALHQAVTIDGRHRGVILELNEEFVGIGLIDKTNDILEGMSVSVTDHFIEVNLFEDM 98
Query: 428 LGRVVDALG 454
GR++D G
Sbjct: 99 AGRIIDTTG 107
>UniRef50_Q1PVR1 Cluster: Strongly similar to ATPA gene encoding
subunit alpha of ATP synthase; n=1; Candidatus Kuenenia
stuttgartiensis|Rep: Strongly similar to ATPA gene
encoding subunit alpha of ATP synthase - Candidatus
Kuenenia stuttgartiensis
Length = 498
Score = 76.6 bits (180), Expect = 6e-13
Identities = 38/75 (50%), Positives = 53/75 (70%)
Frame = +1
Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 693
AP ++ R + EP+ TGIK +DS++ IG+GQRELIIGD TGK+++AIDT+INQ
Sbjct: 133 APSLLQRDFITEPLYTGIKVIDSMLAIGKGQRELIIGDPSTGKSSIAIDTVINQ------ 186
Query: 694 EDEKKKLYCIYVVIG 738
+ ++ IYVVIG
Sbjct: 187 --KNSRVISIYVVIG 199
Score = 57.6 bits (133), Expect = 3e-07
Identities = 31/77 (40%), Positives = 45/77 (58%)
Frame = +2
Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427
L D + E++ F SG +G++ +L D++ VV+ I+ GD +T I V E +
Sbjct: 44 LRDAKLYELILFESGDEGISFDLGVDSIAVVLLTGRNGIRAGDTAYKTDRIASVNATEGL 103
Query: 428 LGRVVDALGNPIDGKGP 478
LGRV+ ALGNPID GP
Sbjct: 104 LGRVLGALGNPID-NGP 119
>UniRef50_Q6KHZ3 Cluster: ATP synthase alpha chain; n=1; Mycoplasma
mobile|Rep: ATP synthase alpha chain - Mycoplasma mobile
Length = 516
Score = 75.8 bits (178), Expect = 1e-12
Identities = 32/52 (61%), Positives = 46/52 (88%)
Frame = +1
Query: 532 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFN 687
R S+ EP+QTGI ++D L+P+G+GQRELIIGDR+TGKT++A++TII+Q+ N
Sbjct: 120 RKSLNEPVQTGIASIDMLIPLGKGQRELIIGDRRTGKTSVALNTIISQKNTN 171
>UniRef50_Q603U2 Cluster: ATP synthase subunit alpha 2; n=6;
Proteobacteria|Rep: ATP synthase subunit alpha 2 -
Methylococcus capsulatus
Length = 503
Score = 75.8 bits (178), Expect = 1e-12
Identities = 38/75 (50%), Positives = 56/75 (74%)
Frame = +1
Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 693
+P II R V++P+ TG + VD+LVPIG+GQR+LIIGD TG+++LAID ++NQ KG
Sbjct: 142 SPPIIARDFVQQPLYTGTRLVDTLVPIGKGQRQLIIGDEGTGRSSLAIDAVLNQ----KG 197
Query: 694 EDEKKKLYCIYVVIG 738
+++ C+YV+IG
Sbjct: 198 ----REVRCVYVLIG 208
Score = 61.7 bits (143), Expect = 2e-08
Identities = 26/77 (33%), Positives = 45/77 (58%)
Frame = +2
Query: 266 EEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVD 445
++++ F G + L +G V+ + + G + G +DVPVGE +LGRV+D
Sbjct: 59 DDVLMFEDGSWAVVFALTKKRIGAVLLHQSENLTAGTPARLAGRTLDVPVGETLLGRVID 118
Query: 446 ALGNPIDGKGPIDTKSR 496
+GNP+DG P++T++R
Sbjct: 119 PIGNPLDGGRPLETRNR 135
>UniRef50_Q9G8S6 Cluster: ATP synthase F1 subunit alpha; n=1;
Naegleria gruberi|Rep: ATP synthase F1 subunit alpha -
Naegleria gruberi
Length = 550
Score = 73.3 bits (172), Expect = 6e-12
Identities = 35/58 (60%), Positives = 42/58 (72%)
Frame = +1
Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFN 687
AP II R VR P TGI VD L+P+G GQRELIIGD+ TGKT+LAI ++NQ+ N
Sbjct: 130 APGIIEREPVRVPFLTGINVVDCLIPVGCGQRELIIGDQNTGKTSLAISAVLNQRLVN 187
Score = 44.8 bits (101), Expect = 0.002
Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = +2
Query: 248 LEDIQAEEMVEFSS---GLKGMALNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPV 415
LE++ E+V+F S L G LNLE V +V+ G +K D+V RT V
Sbjct: 28 LENVFVGEVVKFKSQESNLLGQVLNLEKSQVRIVMINGQQSHLKSNDLVYRTYKDVKTKA 87
Query: 416 GEQILGRVVDALG 454
G +LGRVV LG
Sbjct: 88 GYGVLGRVVSPLG 100
>UniRef50_UPI0000EB1FE1 Cluster: UPI0000EB1FE1 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB1FE1 UniRef100
entry - Canis familiaris
Length = 383
Score = 71.3 bits (167), Expect = 2e-11
Identities = 43/73 (58%), Positives = 52/73 (71%)
Frame = +2
Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427
L + QAEEMV FSS LK M LNLE D + VV + KEGD VKRTGAI+DV VG+++
Sbjct: 87 LRNAQAEEMVGFSS-LKCMCLNLEADML--VVLHLEMNTKEGDTVKRTGAIMDVLVGKKL 143
Query: 428 LGRVVDALGNPID 466
LGRVV A+G+ D
Sbjct: 144 LGRVVGAIGDSKD 156
Score = 54.8 bits (126), Expect = 2e-06
Identities = 34/73 (46%), Positives = 43/73 (58%)
Frame = +1
Query: 520 IIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGED 699
I +P +SV+EPM+TGIKAVDSLVPIG GQ E+ F+ G D
Sbjct: 167 ITLP-ISVQEPMETGIKAVDSLVPIGPGQHEIC---------------------FSDGSD 204
Query: 700 EKKKLYCIYVVIG 738
E+KKLY IY+ +G
Sbjct: 205 ERKKLYYIYIAVG 217
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/43 (55%), Positives = 32/43 (74%)
Frame = +3
Query: 135 AEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKTSR 263
A +S++ EE ILGA ADLE+TG VLS GDGI R+ GL+ ++
Sbjct: 49 AGVSSVSEECILGANTSADLEDTGCVLSFGDGIVRISGLRNAQ 91
>UniRef50_A5IY82 Cluster: ATP synthase alpha chain; n=6;
Mycoplasmataceae|Rep: ATP synthase alpha chain -
Mycoplasma agalactiae
Length = 524
Score = 71.3 bits (167), Expect = 2e-11
Identities = 37/66 (56%), Positives = 45/66 (68%)
Frame = +1
Query: 541 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYC 720
+ E + TGI A+D L+PIG+GQRELIIGDRQTGKT +A++ IINQ K C
Sbjct: 140 LNEQLYTGINAIDLLIPIGKGQRELIIGDRQTGKTHIALNAIINQ--------AAKGTKC 191
Query: 721 IYVVIG 738
IYV IG
Sbjct: 192 IYVAIG 197
>UniRef50_Q98QX5 Cluster: ATP SYNTHASE ALPHA CHAIN; n=2;
Mycoplasma|Rep: ATP SYNTHASE ALPHA CHAIN - Mycoplasma
pulmonis
Length = 529
Score = 69.7 bits (163), Expect = 7e-11
Identities = 30/59 (50%), Positives = 47/59 (79%)
Frame = +1
Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFN 687
+A I R +V P++TGI A+D+++PIGRGQ++LIIGD+ TGKTA+A++ I+ Q++ N
Sbjct: 112 EAKPIYSRKAVNAPLETGITAIDAVLPIGRGQKQLIIGDKGTGKTAIALNAILAQEKSN 170
>UniRef50_Q4A6P2 Cluster: ATP synthase alpha chain; n=2; Mycoplasma
synoviae 53|Rep: ATP synthase alpha chain - Mycoplasma
synoviae (strain 53)
Length = 514
Score = 69.7 bits (163), Expect = 7e-11
Identities = 37/66 (56%), Positives = 49/66 (74%)
Frame = +1
Query: 541 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYC 720
+++ + TG VD L+PIGRGQR+LIIGDR+TGKT LA++TIINQ+ N+G + C
Sbjct: 128 LKKQLLTGYVVVDLLIPIGRGQRQLIIGDRKTGKTFLALNTIINQK--NQG------VKC 179
Query: 721 IYVVIG 738
IYV IG
Sbjct: 180 IYVAIG 185
>UniRef50_Q98QB7 Cluster: ATP synthase subunit alpha 2; n=1;
Mycoplasma pulmonis|Rep: ATP synthase subunit alpha 2 -
Mycoplasma pulmonis
Length = 513
Score = 69.3 bits (162), Expect = 9e-11
Identities = 28/49 (57%), Positives = 43/49 (87%)
Frame = +1
Query: 532 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQ 678
RV + EP++TGI ++D L+PIG+GQR+LI+GD +TGKT++A+ T+INQ+
Sbjct: 122 RVKLNEPLETGIFSIDILLPIGKGQRQLILGDSKTGKTSIALSTMINQK 170
>UniRef50_Q98PM2 Cluster: ATP SYNTHASE ALPHA CHAIN; n=1; Mycoplasma
pulmonis|Rep: ATP SYNTHASE ALPHA CHAIN - Mycoplasma
pulmonis
Length = 509
Score = 68.9 bits (161), Expect = 1e-10
Identities = 38/78 (48%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Frame = +1
Query: 508 FKAPI-IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRF 684
F P+ ++ R + E + TGI ++D PIGRGQRE+I+GD+QTGKT +A++TIINQ+
Sbjct: 114 FFQPVGMLERQHLSEQLYTGILSIDLFNPIGRGQREIIVGDKQTGKTHIALNTIINQR-- 171
Query: 685 NKGEDEKKKLYCIYVVIG 738
N G + CIYV IG
Sbjct: 172 NSG------VKCIYVSIG 183
>UniRef50_Q9XXK1-2 Cluster: Isoform b of Q9XXK1 ; n=1;
Caenorhabditis elegans|Rep: Isoform b of Q9XXK1 -
Caenorhabditis elegans
Length = 146
Score = 67.7 bits (158), Expect = 3e-10
Identities = 30/38 (78%), Positives = 36/38 (94%)
Frame = +2
Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKL 361
L++IQAEEMVEF SG+KGMA+NL+ DNVGVVVFGNDK+
Sbjct: 72 LKNIQAEEMVEFDSGIKGMAMNLDVDNVGVVVFGNDKI 109
Score = 62.5 bits (145), Expect = 1e-08
Identities = 30/40 (75%), Positives = 34/40 (85%)
Frame = +3
Query: 135 AEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLK 254
+E+S ILEERILG +LEETG+VLSIGDGIARVYGLK
Sbjct: 34 SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLK 73
>UniRef50_Q600H8 Cluster: ATP synthase alpha chain; n=3; Mycoplasma
hyopneumoniae|Rep: ATP synthase alpha chain - Mycoplasma
hyopneumoniae (strain 232)
Length = 512
Score = 65.7 bits (153), Expect = 1e-09
Identities = 35/72 (48%), Positives = 46/72 (63%)
Frame = +1
Query: 523 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDE 702
++ R + + TGI A+D PIG GQRELI+GDRQTGKT + I+TIINQ+ +
Sbjct: 115 VLRRELIDRQIYTGIYAIDLFNPIGFGQRELIVGDRQTGKTHIGINTIINQK-------D 167
Query: 703 KKKLYCIYVVIG 738
+ CIYV IG
Sbjct: 168 SRTTKCIYVSIG 179
>UniRef50_Q2F981 Cluster: Ribosomal protein S2; n=3; Oryza
sativa|Rep: Ribosomal protein S2 - Oryza sativa subsp.
indica (Rice)
Length = 483
Score = 64.1 bits (149), Expect = 3e-09
Identities = 30/38 (78%), Positives = 34/38 (89%)
Frame = +1
Query: 523 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQT 636
I+ R SV EPMQTG+KAVDSLVPIGRG+RELIIG R+T
Sbjct: 265 ILERKSVHEPMQTGLKAVDSLVPIGRGRRELIIGGRKT 302
>UniRef50_A0VM48 Cluster: Putative uncharacterized protein; n=3;
Alphaproteobacteria|Rep: Putative uncharacterized
protein - Dinoroseobacter shibae DFL 12
Length = 950
Score = 62.5 bits (145), Expect = 1e-08
Identities = 29/80 (36%), Positives = 50/80 (62%)
Frame = -3
Query: 484 VDWSLAINRVSQSVYYTPKDLLSDGNVYDSTSTLDNISFFDKLVITKYYHTHIVRFQVKG 305
+D +LA+ RV+Q+++ + ++ G+V+D LD+++F D V + + THIV F+V+G
Sbjct: 697 LDRALAVQRVAQAIHDPAQQRVAHGHVHDGLGALDDVAFLDVPVRAEDHDTHIVDFEVQG 756
Query: 304 HSLEA*GELHHLLSLDVFKP 245
H +A EL H L V +P
Sbjct: 757 HPADAARELDHFTGLHVVQP 776
>UniRef50_A7DHD0 Cluster: Putative uncharacterized protein; n=2;
Methylobacterium extorquens PA1|Rep: Putative
uncharacterized protein - Methylobacterium extorquens
PA1
Length = 680
Score = 56.4 bits (130), Expect = 7e-07
Identities = 30/84 (35%), Positives = 50/84 (59%)
Frame = -3
Query: 505 DPHTGFRVDWSLAINRVSQSVYYTPKDLLSDGNVYDSTSTLDNISFFDKLVITKYYHTHI 326
D T R+D +LA++RV+++V + + L+D +V+D LD ++F + V + + I
Sbjct: 443 DAATLGRLDRALAVDRVAEAVDHAAEQTLADRHVHDGAGPLDGLAFLNLTVGAEDHDADI 502
Query: 325 VRFQVKGHSLEA*GELHHLLSLDV 254
V +V+GH+ A EL HL LDV
Sbjct: 503 VLLEVEGHAAHARLELDHLTGLDV 526
>UniRef50_A3L181 Cluster: ATP synthase beta chain; n=3;
Gammaproteobacteria|Rep: ATP synthase beta chain -
Pseudomonas aeruginosa C3719
Length = 154
Score = 55.2 bits (127), Expect = 2e-06
Identities = 25/53 (47%), Positives = 34/53 (64%)
Frame = +2
Query: 338 VVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSR 496
+ G+ + +K G V TGA + VPVG+ LGR++D LGNPID GPI + R
Sbjct: 53 IAMGSTEGLKRGLNVDSTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEER 105
>UniRef50_Q8R9Z1 Cluster: Flagellar biosynthesis/type III secretory
pathway ATPase; n=10; Bacteria|Rep: Flagellar
biosynthesis/type III secretory pathway ATPase -
Thermoanaerobacter tengcongensis
Length = 437
Score = 53.6 bits (123), Expect = 5e-06
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +2
Query: 308 LNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 481
+ + + V ++ GN + I G V TG + V VG+ +LGRV+D LGNPIDGKGP+
Sbjct: 61 VGFKEEKVYLMPLGNMEGIGPGSKVIATGQTLKVNVGKSLLGRVLDGLGNPIDGKGPL 118
Score = 38.7 bits (86), Expect = 0.15
Identities = 23/67 (34%), Positives = 32/67 (47%)
Frame = +1
Query: 451 GKPY*WQGTNRHEIPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDR 630
G P +G ++E P + R +RE M GIKA+D L+ G+GQR I
Sbjct: 109 GNPIDGKGPLKYEKSIPVNNTPPDPLERKRIREVMPLGIKAIDGLLTCGKGQRIGIFAGS 168
Query: 631 QTGKTAL 651
GK+ L
Sbjct: 169 GVGKSTL 175
>UniRef50_A0NUS5 Cluster: Putative uncharacterized protein; n=1;
Stappia aggregata IAM 12614|Rep: Putative
uncharacterized protein - Stappia aggregata IAM 12614
Length = 577
Score = 53.6 bits (123), Expect = 5e-06
Identities = 26/77 (33%), Positives = 46/77 (59%)
Frame = -3
Query: 484 VDWSLAINRVSQSVYYTPKDLLSDGNVYDSTSTLDNISFFDKLVITKYYHTHIVRFQVKG 305
+D + A++RV++ V + L+D + +D LD ++FF+ V + T++V FQV+G
Sbjct: 284 LDRAFAVDRVAERVDDAAQKALADWHFHDGAGPLDGVAFFNVTVGAEDNDTNVVGFQVQG 343
Query: 304 HSLEA*GELHHLLSLDV 254
H+L+ E H SLD+
Sbjct: 344 HALDTTREFDHFTSLDL 360
>UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondrial
precursor; n=14; cellular organisms|Rep: ATP synthase
subunit beta, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 511
Score = 50.8 bits (116), Expect = 3e-05
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +2
Query: 302 MALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 481
+A +L + V + + + G+ V TG + VPVG + LGR+++ +G PID +GPI
Sbjct: 83 VAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPI 142
Query: 482 DTKSR 496
+K R
Sbjct: 143 KSKLR 147
Score = 33.5 bits (73), Expect = 5.5
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +1
Query: 547 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 693
E ++TGIK VD L P RG + + G GKT + I N + + G
Sbjct: 165 EILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGG 213
>UniRef50_Q01D41 Cluster: ATP synthase alpha chain, sodium ion
specific; n=2; Ostreococcus|Rep: ATP synthase alpha
chain, sodium ion specific - Ostreococcus tauri
Length = 625
Score = 50.0 bits (114), Expect = 6e-05
Identities = 27/74 (36%), Positives = 40/74 (54%)
Frame = +1
Query: 517 PIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGE 696
P + R + P+ TG+KAVD L P+GRGQ L+ G+ TG + L + TI Q
Sbjct: 185 PTVEDRKPITTPLVTGVKAVDVLAPLGRGQCMLVSGEPGTGLSELCLTTIAAQ------- 237
Query: 697 DEKKKLYCIYVVIG 738
+K + C+Y +G
Sbjct: 238 -KKTGVRCVYAALG 250
>UniRef50_Q93UD9 Cluster: ATP synthase beta subunit; n=12;
Candidatus Carsonella ruddii|Rep: ATP synthase beta
subunit - Carsonella ruddii
Length = 139
Score = 49.6 bits (113), Expect = 8e-05
Identities = 24/59 (40%), Positives = 36/59 (61%)
Frame = +2
Query: 329 VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRV 505
V V+ FG+ +K IV TG + PVG+ LGR+++ LGNPID KG I + ++ +
Sbjct: 49 VRVIAFGDTNGLKRNMIVLDTGKPILTPVGDCTLGRILNILGNPIDNKGNIFSSKKVPI 107
>UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellular
organisms|Rep: ATP synthase subunit beta - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 504
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/68 (30%), Positives = 40/68 (58%)
Frame = +2
Query: 302 MALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 481
+A +L ++V + + + + G V TG + VPVG++ LGR+++ +G P+D GP+
Sbjct: 75 VAQHLGENSVRTIAMDSTEGLVRGQKVADTGGPIAVPVGKETLGRIMNVIGEPVDEAGPL 134
Query: 482 DTKSRMRV 505
T +R +
Sbjct: 135 KTSARRAI 142
Score = 36.7 bits (81), Expect = 0.59
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = +1
Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690
+AP + + + + + TGIK VD L P +G + + G GKT L ++ I N + +
Sbjct: 145 EAPAYVDQSTEAQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHG 204
Query: 691 G 693
G
Sbjct: 205 G 205
>UniRef50_Q67K17 Cluster: Flagellar-specific ATP synthase; n=1;
Symbiobacterium thermophilum|Rep: Flagellar-specific ATP
synthase - Symbiobacterium thermophilum
Length = 436
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/53 (43%), Positives = 32/53 (60%)
Frame = +2
Query: 323 DNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 481
D + ++ G ++ G V TG + PVG +LGRV+D LGNPID KGP+
Sbjct: 62 DRLLLMPLGETDGLRPGWDVIATGGPLQAPVGMGLLGRVIDGLGNPIDDKGPL 114
Score = 36.7 bits (81), Expect = 0.59
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +1
Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
AP + R + P+ G++A+D+L+ +G GQR I GK+ L
Sbjct: 126 APDPLARQRIHRPLSLGVRALDALITVGMGQRIGIFAGSGVGKSTL 171
>UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondrial
precursor; n=3027; cellular organisms|Rep: ATP synthase
subunit beta, mitochondrial precursor - Homo sapiens
(Human)
Length = 529
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/52 (40%), Positives = 35/52 (67%)
Frame = +2
Query: 335 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTK 490
+ + G + L++ G V +GA + +PVG + LGR+++ +G PID +GPI TK
Sbjct: 111 IAMDGTEGLVR-GQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTK 161
Score = 35.5 bits (78), Expect = 1.4
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +1
Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690
+AP + +E + TGIK VD L P +G + + G GKT L ++ I N + +
Sbjct: 169 EAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHG 228
Query: 691 G 693
G
Sbjct: 229 G 229
>UniRef50_P38168 Cluster: Putative uncharacterized protein YBL100C;
n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YBL100C - Saccharomyces
cerevisiae (Baker's yeast)
Length = 104
Score = 47.2 bits (107), Expect = 4e-04
Identities = 25/47 (53%), Positives = 30/47 (63%)
Frame = -3
Query: 256 VFKP*TRAIPSPMLKTRPVSSRSALGAAPRILSSRMVEISAALWVVE 116
+FKP TRAIPSP +T PVS + A P ILSS+M E S +VE
Sbjct: 2 LFKPKTRAIPSPTARTLPVSFKLASSDTPLILSSKMEETSVGCALVE 48
>UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellular
organisms|Rep: ATP synthase subunit beta - Zymomonas
mobilis
Length = 484
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/51 (39%), Positives = 35/51 (68%)
Frame = +2
Query: 353 DKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRV 505
D L++ ++V TG+ + VPVG + LGR+++ +G P+D +GPI +K M +
Sbjct: 67 DGLVRGQEVVD-TGSEIRVPVGPETLGRIMNVVGRPVDERGPIGSKQTMPI 116
>UniRef50_Q6BRW4 Cluster: Debaryomyces hansenii chromosome D of
strain CBS767 of Debaryomyces hansenii; n=1;
Debaryomyces hansenii|Rep: Debaryomyces hansenii
chromosome D of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 80
Score = 46.8 bits (106), Expect = 6e-04
Identities = 27/74 (36%), Positives = 41/74 (55%)
Frame = +3
Query: 3 LISARIAGSVARRLPNAATQVSKXXXXXXXXXSRKLHVSTTHKAAEISTILEERILGAAP 182
++SAR A R A ++ + + + + ST E+S+ILEERI G +
Sbjct: 1 MLSARPVLRSAARSVAAVSRNLRVKQARPTQLAARCYASTKAAPTEVSSILEERIRGVSD 60
Query: 183 KADLEETGRVLSIG 224
+A+L ETGRVLS+G
Sbjct: 61 EANLNETGRVLSVG 74
>UniRef50_Q98PM3 Cluster: ATP SYNTHASE BETA CHAIN; n=9;
Mycoplasmataceae|Rep: ATP SYNTHASE BETA CHAIN -
Mycoplasma pulmonis
Length = 468
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/64 (35%), Positives = 36/64 (56%)
Frame = +1
Query: 547 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIY 726
E ++TGIKA+D +PI RG + I+G GKT + + I N +F + +K+K
Sbjct: 122 EILETGIKAIDFFIPILRGSKLGILGGAGVGKTVVMKEIIFNASKFKAPQAQKEKKNTSS 181
Query: 727 VVIG 738
+ IG
Sbjct: 182 IFIG 185
Score = 32.7 bits (71), Expect = 9.7
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +2
Query: 314 LEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 472
+ D V ++ + + G +V T ++VPVG+ + +V D LGN ++ K
Sbjct: 45 ISEDEVRAILIKTSQRVFIGQVVLNTMKKLEVPVGKSSMNKVFDILGNCLNDK 97
>UniRef50_Q9RQ79 Cluster: Beta subunit of membrane-bound ATP
synthase; n=8; cellular organisms|Rep: Beta subunit of
membrane-bound ATP synthase - Buchnera aphidicola
Length = 147
Score = 46.4 bits (105), Expect = 7e-04
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +2
Query: 329 VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRV 505
V + G+ +K G IV G + VPVGE LGR+++ LG ID KG + +K +
Sbjct: 52 VRTIAMGSSDGLKRGLIVNDLGHYIKVPVGEPTLGRILNVLGETIDNKGLLKSKRNTNI 110
>UniRef50_A5KSP4 Cluster: Sodium-transporting two-sector ATPase;
n=1; candidate division TM7 genomosp. GTL1|Rep:
Sodium-transporting two-sector ATPase - candidate
division TM7 genomosp. GTL1
Length = 495
Score = 46.4 bits (105), Expect = 7e-04
Identities = 22/56 (39%), Positives = 34/56 (60%)
Frame = +1
Query: 508 FKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQ 675
++AP I+ R + E + +G+ AVD+L PI GQR I+GD + GK+ +NQ
Sbjct: 138 YEAPSIMERTMLSEQLPSGVTAVDALFPIVLGQRIAILGDTKAGKSTFLGQLGVNQ 193
Score = 35.9 bits (79), Expect = 1.0
Identities = 23/78 (29%), Positives = 37/78 (47%)
Frame = +2
Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427
L+ I MV F SG +GM ++ + +V+ + G + I VGE +
Sbjct: 52 LDGIAVGAMVLFESGQRGMVRDVNAETA-LVLNLEAETTPLGTLAVLQDNIPTTRVGEGL 110
Query: 428 LGRVVDALGNPIDGKGPI 481
+GR+V L P+D KG +
Sbjct: 111 IGRIVTPLCRPLDDKGTV 128
>UniRef50_A3IIS5 Cluster: Putative uncharacterized protein; n=1;
Cyanothece sp. CCY 0110|Rep: Putative uncharacterized
protein - Cyanothece sp. CCY 0110
Length = 67
Score = 46.4 bits (105), Expect = 7e-04
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = -1
Query: 486 VSIGPLPSIGFPKASTTRPRICSPTGTSTIAPV 388
V I P PSIG P+ STTRP I SPTGT I PV
Sbjct: 34 VLISPFPSIGRPRESTTRPTIASPTGTWAIFPV 66
Score = 33.5 bits (73), Expect = 5.5
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = -2
Query: 578 STALIPVCIGSRTDTRGMIXGA 513
S A+IPVC+GS+TD R +I GA
Sbjct: 3 SIAVIPVCMGSQTDLRAIIPGA 24
>UniRef50_A6DUD8 Cluster: F0F1 ATP synthase subunit beta; n=1;
Lentisphaera araneosa HTCC2155|Rep: F0F1 ATP synthase
subunit beta - Lentisphaera araneosa HTCC2155
Length = 161
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/68 (30%), Positives = 39/68 (57%)
Frame = +2
Query: 302 MALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 481
+A +L V + + + + G +V TGA + VPVG+++LGR ++ LG+PID K +
Sbjct: 51 VAQHLGEGVVRTIALDSTEGLHRGAVVTDTGAGLKVPVGDEVLGRAMNLLGDPIDNKPVV 110
Query: 482 DTKSRMRV 505
++ +
Sbjct: 111 ESSDEWEI 118
>UniRef50_Q1GNY4 Cluster: ATPase FliI/YscN; n=6; Bacteria|Rep:
ATPase FliI/YscN - Sphingopyxis alaskensis (Sphingomonas
alaskensis)
Length = 443
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = +2
Query: 335 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTK 490
V+ F +K + G V+ GA VPVG+ +LGR++DA GNP+DG+ I ++
Sbjct: 74 VLPFDTNKPLVTGAPVEPHGASSMVPVGKALLGRIMDAQGNPLDGRPAIKSQ 125
Score = 33.1 bits (72), Expect = 7.3
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +1
Query: 493 PYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
P GR P+ RV+ + G++A++ L+ +G GQR II GK+ L
Sbjct: 129 PLAGRKVNPLRRGRVT--RALNMGVRAINGLLTVGEGQRVAIIAGSGVGKSVL 179
>UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondrial
precursor; n=1793; root|Rep: ATP synthase subunit
beta-3, mitochondrial precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 559
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +2
Query: 335 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTK 490
+ + G + L++ G V TGA + VPVG LGR+++ LG PID +G I T+
Sbjct: 139 IAMDGTEGLVR-GRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTE 189
Score = 39.5 bits (88), Expect = 0.084
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +1
Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 693
AP ++ + +E + TGIK VD L P RG + + G GKT L ++ I N + + G
Sbjct: 198 APALVDLATGQEILATGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 257
>UniRef50_Q1IR49 Cluster: ATPase FliI/YscN; n=1; Acidobacteria
bacterium Ellin345|Rep: ATPase FliI/YscN - Acidobacteria
bacterium (strain Ellin345)
Length = 437
Score = 44.4 bits (100), Expect = 0.003
Identities = 24/53 (45%), Positives = 30/53 (56%)
Frame = +1
Query: 493 PYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
P +G AP+ R+ VRE M GI+A+D V GRGQR I G GK+ L
Sbjct: 125 PVDG--SAPLPYARIPVREVMPCGIRAIDGFVTCGRGQRIGIFGGSGVGKSTL 175
Score = 37.5 bits (83), Expect = 0.34
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +2
Query: 356 KLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGP 478
K I+ GD V + VG++ILGRV+DA G P+DG P
Sbjct: 77 KGIRFGDSVVGLAQPPSIAVGDEILGRVLDATGAPLDGITP 117
>UniRef50_O83417 Cluster: Flagellum-specific ATP synthase; n=42;
Bacteria|Rep: Flagellum-specific ATP synthase -
Treponema pallidum
Length = 447
Score = 44.4 bits (100), Expect = 0.003
Identities = 22/48 (45%), Positives = 29/48 (60%)
Frame = +2
Query: 362 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRV 505
++ G V GA + VPVG+ +LGRV++A G IDGKG I R V
Sbjct: 80 VEVGCAVVAEGAALSVPVGDALLGRVLNAFGKAIDGKGEIYAPLRSEV 127
Score = 32.7 bits (71), Expect = 9.7
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 532 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
R+ + M TG++ +DSL+ +G GQR I GK+ L
Sbjct: 137 RLPITRQMVTGVRVLDSLLAVGCGQRLGIFSGSGVGKSTL 176
>UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellular
organisms|Rep: ATP synthase subunit beta - Gluconobacter
oxydans (Gluconobacter suboxydans)
Length = 487
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/51 (41%), Positives = 33/51 (64%)
Frame = +2
Query: 353 DKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRV 505
D L++ G V+ TG + VPVG LGR+++ +G PID +GPI ++ R +
Sbjct: 73 DGLVR-GTEVRDTGKQIMVPVGPATLGRILNVVGEPIDERGPISSELRFPI 122
Score = 34.3 bits (75), Expect = 3.2
Identities = 23/81 (28%), Positives = 37/81 (45%)
Frame = +1
Query: 451 GKPY*WQGTNRHEIPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDR 630
G+P +G E+ + AP + + E + TGIK VD L P +G + + G
Sbjct: 105 GEPIDERGPISSELRFPIHRPAPSFEEQAAASEILVTGIKVVDLLCPYLKGGKIGLFGGA 164
Query: 631 QTGKTALAIDTIINQQRFNKG 693
GKT + + I N + + G
Sbjct: 165 GVGKTVIIQELINNIAKAHGG 185
>UniRef50_Q1NYL2 Cluster: ATP synthase beta chain; n=1; Candidatus
Sulcia muelleri str. Hc (Homalodisca coagulata)|Rep: ATP
synthase beta chain - Candidatus Sulcia muelleri str. Hc
(Homalodisca coagulata)
Length = 129
Score = 44.0 bits (99), Expect = 0.004
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +2
Query: 362 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRV 505
+K G V G + +P+GE+I GRV + +GN IDG G ++ R+ +
Sbjct: 72 LKRGQDVFSLGTTISMPIGEEINGRVFNVVGNTIDGLGDLNNSKRISI 119
>UniRef50_Q12T73 Cluster: ATPase FliI/YscN; n=1; Shewanella
denitrificans OS217|Rep: ATPase FliI/YscN - Shewanella
denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
Length = 436
Score = 43.6 bits (98), Expect = 0.005
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +1
Query: 526 IPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
+ R ++ EP+ T IKA+DS +PIG+GQR I+ GK+ L
Sbjct: 130 LTRAAIDEPLTTRIKALDSFIPIGKGQRVGILAGSGVGKSTL 171
Score = 35.9 bits (79), Expect = 1.0
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +2
Query: 308 LNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 466
+++ V ++ F + I GD + +G + +P+G +LG VVDA G P+D
Sbjct: 57 ISISETQVKLMPFQSASGISFGDKLIGSGTSIRLPMGSGMLGHVVDAFGQPLD 109
>UniRef50_Q9RQ76 Cluster: Beta subunit of membrane-bound ATP
synthase; n=16; Gammaproteobacteria|Rep: Beta subunit of
membrane-bound ATP synthase - Buchnera aphidicola
Length = 147
Score = 42.7 bits (96), Expect = 0.009
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +2
Query: 329 VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRV 505
V + G + G V G + VPVG LGR+V+ LG PID KGP++ K ++
Sbjct: 52 VRTIAMGASDGLSRGLSVLDLGHGIKVPVGISTLGRIVNVLGCPIDMKGPLNNKDGSKI 110
>UniRef50_Q6D5F7 Cluster: Type III secretion protein; n=10;
Enterobacteriaceae|Rep: Type III secretion protein -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 456
Score = 42.3 bits (95), Expect = 0.012
Identities = 27/68 (39%), Positives = 36/68 (52%)
Frame = +1
Query: 469 QGTNRHEIPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTA 648
Q T R + P G P PR+S +P+ TG++AVD L+ IG+GQR I GKT
Sbjct: 135 QVTGRTQ-PVLGDAPPPTSRPRIS--QPLPTGLRAVDGLLTIGQGQRVGIFAGAGCGKTT 191
Query: 649 LAIDTIIN 672
L + N
Sbjct: 192 LLAELARN 199
>UniRef50_Q02C61 Cluster: ATPase, FliI/YscN family; n=2;
Bacteria|Rep: ATPase, FliI/YscN family - Solibacter
usitatus (strain Ellin6076)
Length = 449
Score = 42.3 bits (95), Expect = 0.012
Identities = 18/42 (42%), Positives = 28/42 (66%)
Frame = +1
Query: 526 IPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
+ R + +P+ TGI+A+D+L+P G+GQR I G GK+ L
Sbjct: 133 LDRQHITQPLVTGIRAIDALLPCGKGQRIGIFGGSGVGKSTL 174
>UniRef50_A7CYE2 Cluster: Flagellar protein export ATPase FliI; n=1;
Opitutaceae bacterium TAV2|Rep: Flagellar protein export
ATPase FliI - Opitutaceae bacterium TAV2
Length = 461
Score = 42.3 bits (95), Expect = 0.012
Identities = 18/29 (62%), Positives = 23/29 (79%), Gaps = 1/29 (3%)
Frame = +2
Query: 407 VPV-GEQILGRVVDALGNPIDGKGPIDTK 490
+PV G Q+LGRV+DALG P DG GP+ T+
Sbjct: 109 IPVSGAQLLGRVLDALGRPFDGAGPVPTR 137
Score = 39.5 bits (88), Expect = 0.084
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +1
Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
+ P + R +RE + TG++A+D+ P+GRGQR + GK+ L
Sbjct: 145 RPPHPLRRQRIREALPTGVRALDAFTPLGRGQRLGLFAGSGVGKSTL 191
>UniRef50_P0A1B9 Cluster: Probable ATP synthase spaL; n=32;
Proteobacteria|Rep: Probable ATP synthase spaL -
Salmonella typhimurium
Length = 431
Score = 42.3 bits (95), Expect = 0.012
Identities = 21/45 (46%), Positives = 26/45 (57%)
Frame = +1
Query: 517 PIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
P RV VREP+ TG++A+D L+ G GQR I GKT L
Sbjct: 124 PSYASRVGVREPLITGVRAIDGLLTCGVGQRMGIFASAGCGKTML 168
>UniRef50_P55717 Cluster: Probable ATP synthase y4yI; n=27;
Bacteria|Rep: Probable ATP synthase y4yI - Rhizobium sp.
(strain NGR234)
Length = 451
Score = 41.9 bits (94), Expect = 0.016
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +2
Query: 380 VKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDT 487
V TG + +VP+G +LGRV+D+ P+DGKG + T
Sbjct: 100 VVSTGRMREVPIGPDLLGRVIDSRCRPLDGKGEVKT 135
Score = 36.3 bits (80), Expect = 0.78
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +1
Query: 493 PYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
P GR AP + R V P G++A+D L+ G GQR I G+ GK+ L
Sbjct: 140 PLHGR--APNPMTRRMVERPFPLGVRALDGLLTCGEGQRIGIYGEPGGGKSTL 190
>UniRef50_A5D0F3 Cluster: Flagellar biosynthesis/type III secretory
pathway ATPase; n=4; Bacteria|Rep: Flagellar
biosynthesis/type III secretory pathway ATPase -
Pelotomaculum thermopropionicum SI
Length = 446
Score = 41.1 bits (92), Expect = 0.028
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = +2
Query: 347 GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 481
G K I +G V +G + VGE +LGRV++ LG P+DG GP+
Sbjct: 77 GELKGIYQGCSVTPSGRPFTIKVGEGLLGRVLNGLGEPMDGLGPV 121
Score = 36.3 bits (80), Expect = 0.78
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +1
Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
+ P + R + E + TG++AVD L+ GRGQR I GK+ L
Sbjct: 133 RPPNPLKRRRITEVLSTGVRAVDGLLTCGRGQRIGIFSGSGVGKSTL 179
>UniRef50_Q971B7 Cluster: V-type ATP synthase alpha chain; n=11;
Archaea|Rep: V-type ATP synthase alpha chain -
Sulfolobus tokodaii
Length = 592
Score = 40.7 bits (91), Expect = 0.036
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +2
Query: 248 LEDIQAEEMVEFSS-GLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQ 424
+ + Q E+V S L G +E D + V+ + +K GD V R+GA + V +G
Sbjct: 20 MREAQMFEVVYVSDLKLVGEITRIEGDRAFIQVYESTDGVKPGDKVYRSGAPLSVELGPG 79
Query: 425 ILGRVVDALGNPID 466
++G++ D L P+D
Sbjct: 80 LIGKIYDGLQRPLD 93
Score = 37.1 bits (82), Expect = 0.45
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Frame = +1
Query: 478 NRHEIPYEGRFKAPIIIPR-----VSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGK 642
N EIP + K P+ IPR + EP+ TGI+ +D++ PI +G I G +GK
Sbjct: 181 NGDEIPVKMYQKWPVRIPRPYKEKLEPVEPLLTGIRVLDTVFPIAKGGTAAIPGPFGSGK 240
Query: 643 T 645
T
Sbjct: 241 T 241
>UniRef50_Q8F319 Cluster: Flagellum-specific ATP synthase fliI; n=4;
Leptospira|Rep: Flagellum-specific ATP synthase fliI -
Leptospira interrogans
Length = 454
Score = 40.3 bits (90), Expect = 0.048
Identities = 17/34 (50%), Positives = 26/34 (76%)
Frame = +2
Query: 389 TGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTK 490
+G + +PVG+++LGRV++ +G PID KG I TK
Sbjct: 97 SGRKLAIPVGKELLGRVLNGVGRPIDKKGHIITK 130
Score = 39.1 bits (87), Expect = 0.11
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = +1
Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
+ P + R +R+ + TG++A+D ++ IGRGQR I GK++L
Sbjct: 138 EVPNPLDRPIIRDVLMTGVRAIDGILTIGRGQRVGIFSGSGVGKSSL 184
>UniRef50_Q7UIJ0 Cluster: Flagellum-specific ATP synthase; n=3;
Planctomycetaceae|Rep: Flagellum-specific ATP synthase -
Rhodopirellula baltica
Length = 467
Score = 40.3 bits (90), Expect = 0.048
Identities = 21/68 (30%), Positives = 35/68 (51%)
Frame = +1
Query: 448 FGKPY*WQGTNRHEIPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGD 627
FG+P + + + AP + R + EP+QTG++A+D+++ G GQR I
Sbjct: 119 FGRPIDGKPLSDDLVRVSASRAAPDSLDRPPIDEPLQTGVRAIDAMLTCGVGQRLGIFAG 178
Query: 628 RQTGKTAL 651
GK+ L
Sbjct: 179 SGVGKSTL 186
Score = 37.9 bits (84), Expect = 0.26
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 371 GDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 472
GD V+ + + VG+ + GRV+DA G PIDGK
Sbjct: 93 GDRVRLVSRSLTLRVGDSLCGRVIDAFGRPIDGK 126
>UniRef50_O07025 Cluster: Flagellum-specific ATP synthase; n=24;
Epsilonproteobacteria|Rep: Flagellum-specific ATP
synthase - Helicobacter pylori (Campylobacter pylori)
Length = 434
Score = 40.3 bits (90), Expect = 0.048
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +2
Query: 275 VEFSSGLK--GMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDA 448
+E S G + GM + E + G F + + GD V ++ PVG +LGRV++
Sbjct: 46 IEKSDGSECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLLGRVLNP 105
Query: 449 LGNPIDGKGPID 484
LG ID KG +D
Sbjct: 106 LGQVIDNKGALD 117
>UniRef50_P23445 Cluster: Flagellum-specific ATP synthase; n=18;
Bacteria|Rep: Flagellum-specific ATP synthase - Bacillus
subtilis
Length = 440
Score = 40.3 bits (90), Expect = 0.048
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = +2
Query: 293 LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 466
+K + + +N+ ++ + I G IV+ TG + V VG ++G+V+DA G P+D
Sbjct: 58 IKAEVVGFQEENILLMPYLEAASIAPGSIVEATGESLRVKVGTGLIGQVIDAFGEPLD 115
Score = 37.9 bits (84), Expect = 0.26
Identities = 22/68 (32%), Positives = 34/68 (50%)
Frame = +1
Query: 448 FGKPY*WQGTNRHEIPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGD 627
FG+P + R P P + R +RE M G++++DSL+ +G+GQR I
Sbjct: 110 FGEPLD-ESFCRKVSPVSTEQSPPNPMKRPPIREKMGVGVRSIDSLLTVGKGQRIGIFAG 168
Query: 628 RQTGKTAL 651
GK+ L
Sbjct: 169 SGVGKSTL 176
>UniRef50_A3WGS0 Cluster: FliI, Flagellum-specific ATPase; n=2;
Erythrobacter|Rep: FliI, Flagellum-specific ATPase -
Erythrobacter sp. NAP1
Length = 450
Score = 39.9 bits (89), Expect = 0.064
Identities = 20/48 (41%), Positives = 31/48 (64%)
Frame = +2
Query: 335 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGP 478
+++ G+ +L++ V+ G+ V VG+ +LGR VD LG PIDG GP
Sbjct: 72 MMLLGDAQLLQPRASVRAIGSPGSVRVGDALLGRAVDGLGQPIDG-GP 118
Score = 34.3 bits (75), Expect = 3.2
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +1
Query: 526 IPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTI 666
+ R V E G++AV++L +G GQR II GK+ L IDT+
Sbjct: 136 LARSGVSESFDCGVRAVNALATMGVGQRMGIIAGSGVGKSVL-IDTV 181
>UniRef50_A6CBM4 Cluster: Transcription termination factor Rho; n=1;
Planctomyces maris DSM 8797|Rep: Transcription
termination factor Rho - Planctomyces maris DSM 8797
Length = 543
Score = 39.5 bits (88), Expect = 0.084
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 550 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAID 660
PM ++ +D L PIG+GQR L++ +TGKT L D
Sbjct: 277 PMPITMRIMDMLTPIGKGQRALVVAPPRTGKTMLLQD 313
>UniRef50_Q4IW70 Cluster: ATP synthase F1, beta subunit; n=1;
Azotobacter vinelandii AvOP|Rep: ATP synthase F1, beta
subunit - Azotobacter vinelandii AvOP
Length = 473
Score = 39.1 bits (87), Expect = 0.11
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +1
Query: 517 PIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTI 666
P + + + EP TGIK +D L P+ +G + + G GKT L ++ I
Sbjct: 120 PPLAAQAATSEPFATGIKVIDLLTPLVQGGKAAMFGGAGVGKTVLVMELI 169
Score = 33.5 bits (73), Expect = 5.5
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +2
Query: 311 NLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGP 478
+L+ V + + G + + G + VPVGE +LGR++D +G + KGP
Sbjct: 50 HLDARRVRAIALAATSGLPRGVMARTLGGPLRVPVGEAVLGRLLD-VGGVVGDKGP 104
>UniRef50_A5IFJ3 Cluster: ATP synthase F1, beta chain; n=3;
Legionella pneumophila|Rep: ATP synthase F1, beta chain
- Legionella pneumophila (strain Corby)
Length = 474
Score = 39.1 bits (87), Expect = 0.11
Identities = 17/59 (28%), Positives = 33/59 (55%)
Frame = +2
Query: 311 NLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDT 487
+L+ +V + ++ G IV G + +PV ++ LGR+++ G P+DG P++T
Sbjct: 65 HLDEHHVRAITLHRASGLQRGLIVYDQGTSLRIPVSKECLGRLLNIFGEPLDGAPPLET 123
>UniRef50_A7R4X8 Cluster: Chromosome undetermined scaffold_808,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_808, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 106
Score = 39.1 bits (87), Expect = 0.11
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +2
Query: 257 IQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLI 364
I A E+VEF G + LNLE +NVGVV+ G+ +I
Sbjct: 71 IMASELVEFEEGTIAITLNLESNNVGVVLMGDGLMI 106
>UniRef50_O67531 Cluster: Flagellum-specific ATP synthase; n=2;
Aquifex aeolicus|Rep: Flagellum-specific ATP synthase -
Aquifex aeolicus
Length = 443
Score = 39.1 bits (87), Expect = 0.11
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +2
Query: 269 EMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDA 448
E+ S ++G + D V V+ + +++GD V +V G ++G+VVD
Sbjct: 52 EIQSNSRRIRGEVIGFSGDKVLVMPYEPVFGLRKGDKVLLKNELVSTKTGNGVVGKVVDP 111
Query: 449 LGNPIDG 469
GNP+DG
Sbjct: 112 FGNPLDG 118
>UniRef50_A2WHU5 Cluster: Flagellar biosynthesis/type III secretory
pathway ATPase; n=1; Burkholderia dolosa AUO158|Rep:
Flagellar biosynthesis/type III secretory pathway ATPase
- Burkholderia dolosa AUO158
Length = 390
Score = 38.7 bits (86), Expect = 0.15
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +1
Query: 517 PIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALA 654
P I R+ +R TG++A+D L+ G GQR I + TGKT L+
Sbjct: 126 PSIDNRLPIRTRFLTGVRAIDGLMTCGIGQRVGIFAEAGTGKTTLS 171
>UniRef50_Q9PLK9 Cluster: Virulence ATPase, putative; n=9;
Chlamydiaceae|Rep: Virulence ATPase, putative -
Chlamydia muridarum
Length = 434
Score = 38.3 bits (85), Expect = 0.19
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Frame = +1
Query: 517 PIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTII--NQQRFN 687
P + R ++E TGI+A+D+L+ IG GQR I + GK++L + TI +QQ N
Sbjct: 129 PSPMSRTPIQEIFPTGIRAIDALLTIGEGQRVGIFSEPGGGKSSL-LSTIAKGSQQTIN 186
Score = 35.9 bits (79), Expect = 1.0
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 407 VPVGEQILGRVVDALGNPIDGKGPI 481
+P+ +LGRV+D GNP+DG P+
Sbjct: 92 LPLSHHLLGRVIDGFGNPLDGNPPL 116
>UniRef50_A6DIN5 Cluster: Transcription termination factor Rho; n=1;
Lentisphaera araneosa HTCC2155|Rep: Transcription
termination factor Rho - Lentisphaera araneosa HTCC2155
Length = 613
Score = 38.3 bits (85), Expect = 0.19
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 547 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
EP ++ +D +VP+G GQR LI+ +TGKT L
Sbjct: 348 EPTNHSMRVLDLVVPVGAGQRGLIVAPPRTGKTVL 382
>UniRef50_Q8TUT0 Cluster: V-type ATP synthase beta chain (EC
3.6.3.14) (V-type ATPase subunit B) [Contains: Mka atpB
intein]; n=8; cellular organisms|Rep: V-type ATP
synthase beta chain (EC 3.6.3.14) (V-type ATPase subunit
B) [Contains: Mka atpB intein] - Methanopyrus kandleri
Length = 990
Score = 38.3 bits (85), Expect = 0.19
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 296 KGMALNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 472
+G L D V VF G L V+ TG + +PV +LGR+++ G PIDG
Sbjct: 48 RGQVLEARRDAAVVQVFEGTSGLDTTSTKVRFTGETLRIPVSTDLLGRILNGRGEPIDG- 106
Query: 473 GP 478
GP
Sbjct: 107 GP 108
>UniRef50_Q8KKY7 Cluster: Type III secretion system ATP synthase
protein; n=2; Proteobacteria|Rep: Type III secretion
system ATP synthase protein - Rhizobium etli (strain CFN
42 / ATCC 51251)
Length = 439
Score = 37.9 bits (84), Expect = 0.26
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 526 IPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQ 678
+ R +R+P +GI A+D L+ G+GQR I G GK+ L + N +
Sbjct: 137 LSRRPIRQPFTSGIAALDGLLTCGQGQRIGIFGAPGAGKSTLVSQIVANNK 187
>UniRef50_A1SEP6 Cluster: ATPase, FliI/YscN family; n=10;
Bacteria|Rep: ATPase, FliI/YscN family - Nocardioides
sp. (strain BAA-499 / JS614)
Length = 435
Score = 37.9 bits (84), Expect = 0.26
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +2
Query: 347 GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPID 484
G+ ++ GD V G + +PVGE + GRV+D LG P+D +D
Sbjct: 72 GDTTGLRVGDHVVNHGEGLRIPVGEALRGRVLDGLGRPMDDGPALD 117
Score = 34.3 bits (75), Expect = 3.2
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +1
Query: 517 PIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
P + R + + + G++A+D+L+ GRGQR I+ GK++L
Sbjct: 129 PAALSRPRIDQQLGLGVRAMDALISCGRGQRLGIMAGSGVGKSSL 173
>UniRef50_P74857 Cluster: Probable secretion system apparatus ATP
synthase ssaN; n=17; Gammaproteobacteria|Rep: Probable
secretion system apparatus ATP synthase ssaN -
Salmonella typhimurium
Length = 433
Score = 37.9 bits (84), Expect = 0.26
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +2
Query: 407 VPVGEQILGRVVDALGNPIDGK 472
VPVGE +LGRV+D G P+DG+
Sbjct: 91 VPVGEALLGRVIDGFGRPLDGR 112
Score = 36.3 bits (80), Expect = 0.78
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 517 PIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
P + R + +P+ TGI+A+DS+ G GQR I GK+ L
Sbjct: 127 PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTL 171
>UniRef50_Q53153 Cluster: FliI protein; n=7; Rhodobacteraceae|Rep:
FliI protein - Rhodobacter sphaeroides (Rhodopseudomonas
sphaeroides)
Length = 442
Score = 37.5 bits (83), Expect = 0.34
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +1
Query: 487 EIPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
E P GR P+ R +V P+ G++A+++ + +G+GQR I+ GK+ L
Sbjct: 125 EWPLAGRVMNPLA--RTAVSRPLDVGVRAINAALTVGQGQRIGIVAGSGEGKSVL 177
>UniRef50_Q1FJZ5 Cluster: Transcription termination factor Rho; n=3;
Clostridiales|Rep: Transcription termination factor Rho
- Clostridium phytofermentans ISDg
Length = 650
Score = 37.5 bits (83), Expect = 0.34
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 532 RVSVREP-MQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
R+ + P Q ++ VD + PIG+GQR +I+ +TGKT L
Sbjct: 373 RIHLETPGCQVAMRMVDLISPIGKGQRGMIVSQPKTGKTTL 413
>UniRef50_A2W3Z6 Cluster: ATPase FliI/YscN; n=1; Burkholderia
cenocepacia PC184|Rep: ATPase FliI/YscN - Burkholderia
cenocepacia PC184
Length = 386
Score = 37.5 bits (83), Expect = 0.34
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +2
Query: 410 PVGEQILGRVVDALGNPIDGKGPI 481
PVGE + GRV+D LG P+D GP+
Sbjct: 27 PVGEALFGRVLDGLGRPLDDLGPV 50
>UniRef50_Q5SJE9 Cluster: Transcription termination factor Rho; n=3;
Bacteria|Rep: Transcription termination factor Rho -
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 426
Score = 37.1 bits (82), Expect = 0.45
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +1
Query: 550 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
P + + +D L PIGRGQR LI+ + GKT L
Sbjct: 160 PDELSTRVIDLLAPIGRGQRGLIVAPPKAGKTTL 193
>UniRef50_Q55738 Cluster: DNA gyrase subunit A; n=37;
Cyanobacteria|Rep: DNA gyrase subunit A - Synechocystis
sp. (strain PCC 6803)
Length = 860
Score = 37.1 bits (82), Expect = 0.45
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Frame = +2
Query: 272 MVEFSSGLK-GMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIV----DVPVGEQILGR 436
++ SSG+ GMA N+ P N+G V+ G LI+ +I ++ + D P G QILGR
Sbjct: 168 LINGSSGIAVGMATNIPPHNLGEVIDGAIALIRNPEITEQELMQIIPGPDFPTGAQILGR 227
>UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellular
organisms|Rep: ATP synthase subunit beta -
Fervidobacterium islandicum
Length = 472
Score = 37.1 bits (82), Expect = 0.45
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +2
Query: 335 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 481
V + D L++ G V+ TG + PVG +LGR+ + +G PID +G +
Sbjct: 60 VAMDSTDGLVR-GLEVENTGEPIKAPVGRGVLGRMFNVIGEPIDEQGEL 107
Score = 34.3 bits (75), Expect = 3.2
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +1
Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIIN 672
AP + + + E ++TG+K +D L P +G + G GKT L ++ I N
Sbjct: 119 APSMTEQKTEIEILETGLKVIDLLAPFPKGGKIGFFGGAGVGKTVLVMEMIRN 171
>UniRef50_Q74G36 Cluster: Flagellum-specific ATP synthase FliI;
n=15; Bacteria|Rep: Flagellum-specific ATP synthase FliI
- Geobacter sulfurreducens
Length = 441
Score = 36.7 bits (81), Expect = 0.59
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +2
Query: 380 VKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 481
VKR A + VG +LGRV+D LG PID KGP+
Sbjct: 87 VKRKKA--SLGVGPGLLGRVIDGLGVPIDDKGPL 118
Score = 34.7 bits (76), Expect = 2.4
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 532 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
R +R+P+ GI+A+++L+ G GQR I+ GK+ L
Sbjct: 136 RRPIRQPLDLGIRAINALLTCGEGQRVGIMAGSGVGKSTL 175
>UniRef50_Q62EB7 Cluster: ATP synthase F1, beta subunit; n=27;
Bacteria|Rep: ATP synthase F1, beta subunit -
Burkholderia mallei (Pseudomonas mallei)
Length = 534
Score = 36.7 bits (81), Expect = 0.59
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +1
Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTI 666
AP++ + S TGIK +D L P+ +G + + G GKT ++ I
Sbjct: 149 APLLAEQKSANALFATGIKVIDLLAPLAQGGKAAMFGGAGVGKTVFVMELI 199
Score = 34.3 bits (75), Expect = 3.2
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 362 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 466
++ G V+ TG + VPVG+ +LGR++ G P D
Sbjct: 97 LRRGAAVRATGGPIRVPVGDAVLGRLLSVTGAPGD 131
>UniRef50_A3Z0H3 Cluster: V-type ATPase, A subunit; n=5;
Bacteria|Rep: V-type ATPase, A subunit - Synechococcus
sp. WH 5701
Length = 621
Score = 36.7 bits (81), Expect = 0.59
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +2
Query: 293 LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDG 469
LK L + VF + + + GD V++TG ++ V +G +L +V D L NP+ G
Sbjct: 51 LKAEVLRVHGSTADAQVFESTRGVGIGDPVEQTGELLSVKLGPGLLTQVYDGLQNPLAG 109
>UniRef50_Q98QB6 Cluster: ATP synthase subunit beta 2; n=5;
Mycoplasma|Rep: ATP synthase subunit beta 2 - Mycoplasma
pulmonis
Length = 468
Score = 36.7 bits (81), Expect = 0.59
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = +1
Query: 538 SVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEK 705
S E + TGIK +D VPI +G + I G GKT + + I N R D K
Sbjct: 117 SDNEIINTGIKIIDFFVPIIKGSKIGIFGGAGVGKTIIIKELIFNISRQRDSNDVK 172
>UniRef50_UPI00004D9CFE Cluster: FH1/FH2 domain-containing protein 3
(Formin homolog overexpressed in spleen 2) (hFHOS2)
(Formactin-2).; n=3; Xenopus tropicalis|Rep: FH1/FH2
domain-containing protein 3 (Formin homolog
overexpressed in spleen 2) (hFHOS2) (Formactin-2). -
Xenopus tropicalis
Length = 1524
Score = 36.3 bits (80), Expect = 0.78
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +1
Query: 82 PQWPWHLANYMSQPPTKLPRSPPSSKRGSLEPRPRL 189
P+WP S PPT+L +SPPSS R S +P+PRL
Sbjct: 390 PEWP-------SPPPTRLAQSPPSSSRPS-QPQPRL 417
>UniRef50_Q9FC33 Cluster: Putative transcription terminator factor;
n=2; Streptomyces|Rep: Putative transcription terminator
factor - Streptomyces coelicolor
Length = 415
Score = 36.3 bits (80), Expect = 0.78
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +1
Query: 568 KAVDSLVPIGRGQRELIIGDRQTGKTAL 651
+ VD L P+G+GQR LI+ +TGKT L
Sbjct: 152 RVVDLLAPVGKGQRGLIVAPPKTGKTVL 179
>UniRef50_Q058C4 Cluster: Flagellum-specific ATP synthase; n=1;
Buchnera aphidicola str. Cc (Cinara cedri)|Rep:
Flagellum-specific ATP synthase - Buchnera aphidicola
subsp. Cinara cedri
Length = 457
Score = 36.3 bits (80), Expect = 0.78
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +2
Query: 290 GLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDG 469
G K L P +F K+ E I + P G ++LGRV++ G+P+D
Sbjct: 71 GFKKKIFFLIPIQNSYGIFPGAKVFSENYIFNKDIKFQYFPFGSKLLGRVLNGFGHPLDN 130
Query: 470 KGPIDTKSRM 499
G ++ K ++
Sbjct: 131 LGDLNLKKKL 140
Score = 34.3 bits (75), Expect = 3.2
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 511 KAPII-IPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
K PI + R + E + TG+ A++SL+ +GRGQR I GK+ L
Sbjct: 146 KKPINPLNRKPITEILDTGVCAINSLLTVGRGQRMGIFSQAGIGKSML 193
>UniRef50_A7M2K2 Cluster: Putative uncharacterized protein; n=1;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 765
Score = 36.3 bits (80), Expect = 0.78
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +1
Query: 568 KAVDSLVPIGRGQRELIIGDRQTGKTALAID 660
+ VD PIG+GQR LI+ +TGKT L D
Sbjct: 507 RVVDLFAPIGKGQRALIVAQPKTGKTILMKD 537
>UniRef50_P52607 Cluster: Flagellum-specific ATP synthase; n=3;
Borrelia burgdorferi group|Rep: Flagellum-specific ATP
synthase - Borrelia burgdorferi (Lyme disease
spirochete)
Length = 436
Score = 36.3 bits (80), Expect = 0.78
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +2
Query: 362 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKG 475
I+ G+ V +++ + +++LGRV+D+LG PID KG
Sbjct: 78 IEVGNKVYSLNKGLEINLSDELLGRVIDSLGRPIDNKG 115
>UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5;
Bacteroides|Rep: ATP synthase subunit beta - Bacteroides
fragilis
Length = 505
Score = 36.3 bits (80), Expect = 0.78
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +2
Query: 323 DNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDG 469
+ V V + ++ G V TG + +PVGEQI GR+++ +G+ IDG
Sbjct: 57 NTVRTVAMDSTDGLQRGMKVFPTGGPITMPVGEQIKGRLMNVVGDSIDG 105
Score = 35.5 bits (78), Expect = 1.4
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +1
Query: 538 SVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 693
+V+E + TGIK +D L P +G + + G GKT L ++ I N + + G
Sbjct: 129 TVQEVLFTGIKVIDLLEPYSKGGKIGLFGGAGVGKTVLIMELINNIAKKHNG 180
>UniRef50_UPI00015B5329 Cluster: PREDICTED: similar to GA14484-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
GA14484-PA - Nasonia vitripennis
Length = 341
Score = 35.9 bits (79), Expect = 1.0
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 299 GMALNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKG 475
G L + V VF G + + + TG I+ PV E +LGRV + G PID KG
Sbjct: 68 GQVLEVSGSKAVVQVFEGTSGIDAKNTHCEFTGDILRTPVSEDMLGRVFNGSGKPID-KG 126
Query: 476 P 478
P
Sbjct: 127 P 127
>UniRef50_Q8F7C5 Cluster: Transcription termination factor rho;
n=54; cellular organisms|Rep: Transcription termination
factor rho - Leptospira interrogans
Length = 482
Score = 35.9 bits (79), Expect = 1.0
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +1
Query: 547 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
+P + +D + PIG+GQR LI+ +TGKT L
Sbjct: 216 DPSMLDTRILDLMCPIGKGQRALIVAPPRTGKTIL 250
>UniRef50_Q0EZL2 Cluster: Flagellum-specific ATP synthase; n=1;
Mariprofundus ferrooxydans PV-1|Rep: Flagellum-specific
ATP synthase - Mariprofundus ferrooxydans PV-1
Length = 471
Score = 35.9 bits (79), Expect = 1.0
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 347 GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 466
G+ + I GD ++ + VG +LGRV+DA GNP+D
Sbjct: 80 GSTRGIAPGDPIEPLSTTPSIRVGPHLLGRVLDAQGNPMD 119
Score = 35.9 bits (79), Expect = 1.0
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 532 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
R ++ PMQ G++A+D+ +P+G GQR + GK+ L
Sbjct: 142 RHTIDAPMQLGVRAIDACMPMGWGQRMGLFAGAGVGKSTL 181
>UniRef50_P15313 Cluster: Vacuolar ATP synthase subunit B, kidney
isoform; n=451; cellular organisms|Rep: Vacuolar ATP
synthase subunit B, kidney isoform - Homo sapiens
(Human)
Length = 513
Score = 35.9 bits (79), Expect = 1.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +2
Query: 389 TGAIVDVPVGEQILGRVVDALGNPIDGKGPI 481
TG I+ PV E +LGRV + G PID KGP+
Sbjct: 109 TGDILRTPVSEDMLGRVFNGSGKPID-KGPV 138
>UniRef50_P38606 Cluster: Vacuolar ATP synthase catalytic subunit A;
n=209; cellular organisms|Rep: Vacuolar ATP synthase
catalytic subunit A - Homo sapiens (Human)
Length = 617
Score = 35.9 bits (79), Expect = 1.0
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +2
Query: 287 SGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPI 463
S L G + LE D + V+ + GD V RTG + V +G I+G + D + P+
Sbjct: 48 SELVGEIIRLEGDMATIQVYEETSGVSVGDPVLRTGKPLSVELGPGIMGAIFDGIQRPL 106
>UniRef50_P84582 Cluster: ATP synthase subunit alpha; n=1; Populus
euphratica|Rep: ATP synthase subunit alpha - Populus
euphratica (Euphrates poplar)
Length = 98
Score = 35.9 bits (79), Expect = 1.0
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +2
Query: 359 LIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 472
+++ GD + R I +PV E LGRV++AL PIDG+
Sbjct: 7 VLQVGDGIAR---IAQIPVSEAYLGRVINALAKPIDGR 41
>UniRef50_UPI0000E823B4 Cluster: PREDICTED: similar to vacuolar
proton-ATPase A-subunit, partial; n=2; Gallus
gallus|Rep: PREDICTED: similar to vacuolar proton-ATPase
A-subunit, partial - Gallus gallus
Length = 262
Score = 35.5 bits (78), Expect = 1.4
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +2
Query: 293 LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPI 463
L G + LE D + V+ ++ GD V RTG + V +G ILG + D + P+
Sbjct: 50 LVGEIIRLEGDMATLQVYEETSGLRVGDPVLRTGQPLSVELGPGILGSIFDGIQRPL 106
>UniRef50_Q6KIC3 Cluster: ATP synthase beta chain; n=1; Mycoplasma
mobile|Rep: ATP synthase beta chain - Mycoplasma mobile
Length = 784
Score = 35.5 bits (78), Expect = 1.4
Identities = 18/69 (26%), Positives = 38/69 (55%)
Frame = +1
Query: 487 EIPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTI 666
E+ ++ ++ P+ ++ ++TGIK +D L+PI +G + ++G GKT + + I
Sbjct: 410 EMQHDSEATRYVVSPKNAI---LETGIKVIDVLLPIPKGGKTGLLGGAGVGKTVIVQELI 466
Query: 667 INQQRFNKG 693
+F+ G
Sbjct: 467 NAFIKFHDG 475
Score = 33.1 bits (72), Expect = 7.3
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +2
Query: 329 VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 466
V V GN+ +K G VK + + +++LGRV+D +G +D
Sbjct: 349 VSTFVLGNETGLKIGTKVKSKNQSYAIKISKRLLGRVIDPIGKILD 394
>UniRef50_Q2IQ94 Cluster: Sodium-transporting two-sector ATPase;
n=3; Bacteria|Rep: Sodium-transporting two-sector ATPase
- Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 475
Score = 35.5 bits (78), Expect = 1.4
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +2
Query: 299 GMALNLEPDNVGVVVFGNDK-LIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKG 475
G + L D + V V + L V TG + + V +LGRV+D LG P DG
Sbjct: 51 GQVIALSRDRIAVQVLEETRGLAPARSEVTLTGQVARLGVARGMLGRVLDGLGRPADGLP 110
Query: 476 P 478
P
Sbjct: 111 P 111
>UniRef50_A0Z379 Cluster: ATPase FliI/YscN; n=1; marine gamma
proteobacterium HTCC2080|Rep: ATPase FliI/YscN - marine
gamma proteobacterium HTCC2080
Length = 477
Score = 35.5 bits (78), Expect = 1.4
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +2
Query: 323 DNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGP 478
D + ++ G+ + ++ G V+ +PVG +LGRV+D G P+DG P
Sbjct: 76 DRLVMMCEGSAEGLRPGARVEPLEGSDRIPVGPGLLGRVIDGAGRPLDGFSP 127
Score = 35.1 bits (77), Expect = 1.8
Identities = 17/54 (31%), Positives = 32/54 (59%)
Frame = +1
Query: 490 IPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
+P +G P+ R ++++P+ GI+A++SL+ + RGQR + GK+ L
Sbjct: 134 VPMQGEPLNPM--DRGALQKPLDVGIRAINSLLTVARGQRIGLFAGSGVGKSTL 185
>UniRef50_Q8ZXR2 Cluster: V-type ATP synthase beta chain; n=5;
Archaea|Rep: V-type ATP synthase beta chain -
Pyrobaculum aerophilum
Length = 467
Score = 35.5 bits (78), Expect = 1.4
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +2
Query: 329 VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 466
V V+ G L +G V+ G + +PV EQ++GR++D G P D
Sbjct: 56 VAQVLGGTLGLPAKGSTVRFYGKTLKIPVSEQLIGRILDGKGQPRD 101
>UniRef50_A3ZQF8 Cluster: Transcription termination factor Rho; n=2;
Planctomycetaceae|Rep: Transcription termination factor
Rho - Blastopirellula marina DSM 3645
Length = 444
Score = 35.1 bits (77), Expect = 1.8
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +1
Query: 568 KAVDSLVPIGRGQRELIIGDRQTGKTAL 651
+ VD L P+G+GQR L++ +TGKT L
Sbjct: 181 RIVDLLTPLGKGQRALVVAPPRTGKTML 208
>UniRef50_A7DBR8 Cluster: Transport system permease protein; n=3;
Proteobacteria|Rep: Transport system permease protein -
Methylobacterium extorquens PA1
Length = 896
Score = 34.7 bits (76), Expect = 2.4
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +3
Query: 132 AAEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKTSRLR 269
A +I+ IL LG AP L ++S+GD AR G++T RLR
Sbjct: 755 AGDIAAILPAMALGLAPLVLLRWRVNLMSLGDEEARALGVETRRLR 800
>UniRef50_Q25691 Cluster: Vacuolar ATP synthase subunit B; n=25;
Eukaryota|Rep: Vacuolar ATP synthase subunit B -
Plasmodium falciparum
Length = 494
Score = 34.7 bits (76), Expect = 2.4
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +2
Query: 296 KGMALNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 472
+G L + + VF G + + V+ +G I+ +P+ +++LGRV + G PID K
Sbjct: 68 QGQILEVCGKKAVIQVFEGTSGIDNKNSYVEVSGDILKMPMSDEMLGRVFNGSGKPID-K 126
Query: 473 GP 478
GP
Sbjct: 127 GP 128
>UniRef50_P45835 Cluster: Transcription termination factor rho;
n=87; Bacteria|Rep: Transcription termination factor rho
- Mycobacterium leprae
Length = 610
Score = 34.7 bits (76), Expect = 2.4
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 550 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAID 660
P + + +D ++PIG+GQR LI+ + GKT + D
Sbjct: 337 PDRLTTRVIDLIMPIGKGQRALIVSPPKAGKTTILQD 373
>UniRef50_Q4RR34 Cluster: Chromosome 14 SCAF15003, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 14 SCAF15003, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 590
Score = 34.3 bits (75), Expect = 3.2
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +1
Query: 496 YEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
+ G I+ R+S + P + D + IG+G L++G+ TGKT+L
Sbjct: 366 HAGPVDTAFIVDRLSYKSPFADELLVEDLSLRIGQGAHVLVVGNTGTGKTSL 417
>UniRef50_Q8NR58 Cluster: Transcription termination factor; n=3;
Corynebacterium|Rep: Transcription termination factor -
Corynebacterium glutamicum (Brevibacterium flavum)
Length = 762
Score = 34.3 bits (75), Expect = 3.2
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 568 KAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGE 696
+ +D ++PIG+GQR LI+ + GKT + + I N N E
Sbjct: 490 RVIDLIMPIGKGQRALIVSPPKAGKTTI-LQNIANAISTNNPE 531
>UniRef50_A7CZI2 Cluster: H+transporting two-sector ATPase
alpha/beta subunit central region; n=1; Opitutaceae
bacterium TAV2|Rep: H+transporting two-sector ATPase
alpha/beta subunit central region - Opitutaceae
bacterium TAV2
Length = 403
Score = 34.3 bits (75), Expect = 3.2
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +1
Query: 568 KAVDSLVPIGRGQRELIIGDRQTGKTALAID 660
+AVD P+G+G R LI+ +TGKT L D
Sbjct: 146 RAVDLFCPVGKGTRGLIVAPPRTGKTTLLRD 176
>UniRef50_A1EBU5 Cluster: SctN; n=1; Lysobacter enzymogenes|Rep:
SctN - Lysobacter enzymogenes
Length = 450
Score = 34.3 bits (75), Expect = 3.2
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +2
Query: 389 TGAIVDVPVGEQILGRVVDALGNPIDGKG 475
TG V GE +LGR++DA G+ IDG+G
Sbjct: 102 TGRQASVRCGEGLLGRILDANGDAIDGRG 130
>UniRef50_Q9PK86 Cluster: V-type ATP synthase beta chain; n=19;
Bacteria|Rep: V-type ATP synthase beta chain - Chlamydia
muridarum
Length = 438
Score = 34.3 bits (75), Expect = 3.2
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +2
Query: 308 LNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 472
L + V + VFG + GD V G ++V G+ +LGR + G PID +
Sbjct: 44 LRFDAKKVTLQVFGGTSGLSTGDKVVFLGRPMEVVYGDSLLGRRFNGTGKPIDNE 98
>UniRef50_P52157 Cluster: Transcription termination factor rho;
n=14; Bacteria|Rep: Transcription termination factor rho
- Streptomyces lividans
Length = 707
Score = 34.3 bits (75), Expect = 3.2
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +1
Query: 568 KAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGE 696
+ +D + PIG+GQR LI+ +TGKT + + I N N E
Sbjct: 440 RIIDLVAPIGKGQRGLIVAPPKTGKT-MIMQAIANAITHNNPE 481
>UniRef50_O67031 Cluster: Transcription termination factor rho;
n=251; Bacteria|Rep: Transcription termination factor
rho - Aquifex aeolicus
Length = 436
Score = 34.3 bits (75), Expect = 3.2
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 547 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
+P + + V + PIG+GQR LI+ + GKT L
Sbjct: 169 DPNELSTRVVSLIAPIGKGQRGLIVAPPKAGKTVL 203
>UniRef50_Q08637 Cluster: V-type sodium ATP synthase subunit B (EC
3.6.3.15) (Na(+)- translocating ATPase subunit B); n=14;
cellular organisms|Rep: V-type sodium ATP synthase
subunit B (EC 3.6.3.15) (Na(+)- translocating ATPase
subunit B) - Enterococcus hirae
Length = 458
Score = 34.3 bits (75), Expect = 3.2
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Frame = +2
Query: 257 IQAEEMVE--FSSG--LKGMALNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGE 421
++ EE++E +G +G L ++ D V +F G + + V+ G + + V E
Sbjct: 24 VKYEELIEVRMQNGEIRRGQVLEVQEDKAMVQIFEGTSGINLKNSSVRFLGHPLQLGVSE 83
Query: 422 QILGRVVDALGNPIDGKGP 478
++GRV D LG P D GP
Sbjct: 84 DMIGRVFDGLGRPKD-NGP 101
>UniRef50_Q52371 Cluster: Type III secretion ATP synthase hrcN;
n=18; Pseudomonas|Rep: Type III secretion ATP synthase
hrcN - Pseudomonas syringae pv. syringae
Length = 449
Score = 34.3 bits (75), Expect = 3.2
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Frame = +1
Query: 448 FGKPY*WQGTNRHEIPYEGRFKAPII---IP---RVSVREPMQTGIKAVDSLVPIGRGQR 609
FG+P P + R P+I +P R + + TGI+A+DS + +G GQR
Sbjct: 111 FGRPLMGDCLGAFAGPEDRRTTLPVIADALPPTQRPRITRALPTGIRAIDSAILLGEGQR 170
Query: 610 ELIIGDRQTGKTALAIDTIIN 672
+ GKT L + N
Sbjct: 171 VGLFAGAGCGKTTLMAELARN 191
>UniRef50_P26465 Cluster: Flagellum-specific ATP synthase; n=258;
cellular organisms|Rep: Flagellum-specific ATP synthase
- Salmonella typhimurium
Length = 456
Score = 34.3 bits (75), Expect = 3.2
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +1
Query: 526 IPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
+ R + + TG++A+++L+ +GRGQR + GK+ L
Sbjct: 150 LQRTPIEHVLDTGVRAINALLTVGRGQRMGLFAGSGVGKSVL 191
>UniRef50_UPI00005F655A Cluster: COG1157: Flagellar
biosynthesis/type III secretory pathway ATPase; n=1;
Yersinia pestis Angola|Rep: COG1157: Flagellar
biosynthesis/type III secretory pathway ATPase -
Yersinia pestis Angola
Length = 389
Score = 33.9 bits (74), Expect = 4.2
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +2
Query: 413 VGEQILGRVVDALGNPIDGKGPI 481
+G+ LGRV++ LG P+DGKG +
Sbjct: 97 IGDSWLGRVINGLGEPLDGKGQL 119
Score = 33.5 bits (73), Expect = 5.5
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = +1
Query: 451 GKPY*WQGTNRHEIPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDR 630
G+P +G P + + + R +V P+ G+ A++ L+ IG+GQR ++
Sbjct: 110 GEPLDGKGQLGGSTPLQQQLPQIHPLQRRAVDTPLDVGVNAINGLLTIGKGQRVGLMAGS 169
Query: 631 QTGKTAL 651
GK+ L
Sbjct: 170 GVGKSVL 176
>UniRef50_Q9MTQ2 Cluster: ATP synthase subunit beta; n=2;
Amphidinium|Rep: ATP synthase subunit beta - Amphidinium
operculatum (Dinoflagellate)
Length = 548
Score = 33.9 bits (74), Expect = 4.2
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 535 VSVREPM-QTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIIN 672
+ + P+ +TGIK VD L P +G + + G GKT L ++ I N
Sbjct: 201 IDITAPLFETGIKVVDVLTPYKKGGKVGLFGGAGVGKTVLIMELIRN 247
>UniRef50_A6RD01 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 762
Score = 33.9 bits (74), Expect = 4.2
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +1
Query: 538 SVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLY 717
S RE Q + VP Q I G Q G +A D I+NQQRF+ G++ + L
Sbjct: 614 STREAHQLHLNVERIRVPETVFQPSAIAGLDQAGLVEIAAD-IVNQQRFSSGQERARLLR 672
Query: 718 CIYVVIG 738
+++ G
Sbjct: 673 DVFITGG 679
>UniRef50_Q141X8 Cluster: ATPase FliI/YscN; n=1; Burkholderia
xenovorans LB400|Rep: ATPase FliI/YscN - Burkholderia
xenovorans (strain LB400)
Length = 444
Score = 33.5 bits (73), Expect = 5.5
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +2
Query: 425 ILGRVVDALGNPIDGKGPI 481
+LGRVVD LGNP+DG GP+
Sbjct: 102 LLGRVVDGLGNPLDG-GPV 119
>UniRef50_A6VWI3 Cluster: H+transporting two-sector ATPase
alpha/beta subunit central region; n=4;
Gammaproteobacteria|Rep: H+transporting two-sector
ATPase alpha/beta subunit central region - Marinomonas
sp. MWYL1
Length = 318
Score = 33.5 bits (73), Expect = 5.5
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 556 QTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
Q ++A+D + PIG GQR LI+ +GKT +
Sbjct: 55 QRTVRAMDLITPIGMGQRGLIVAPPGSGKTTM 86
>UniRef50_A3SFS3 Cluster: Flagellum-specific ATP synthase; n=2;
Sulfitobacter|Rep: Flagellum-specific ATP synthase -
Sulfitobacter sp. EE-36
Length = 463
Score = 33.5 bits (73), Expect = 5.5
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 505 RFKA--PIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
RF+A P R V E ++T IK +D PI RGQR + GK+ +
Sbjct: 126 RFRANPPGAFDRKKVGEKLETQIKCIDIFTPICRGQRMGVFAGSGVGKSTM 176
>UniRef50_A1T0I0 Cluster: ATPase, FliI/YscN family protein; n=1;
Psychromonas ingrahamii 37|Rep: ATPase, FliI/YscN family
protein - Psychromonas ingrahamii (strain 37)
Length = 436
Score = 33.5 bits (73), Expect = 5.5
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1
Query: 523 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
I+ + + EP GIK+++ L+ + +GQR ++ GK+ L
Sbjct: 129 ILKKKPISEPFDVGIKSINGLLTLAKGQRVGLVAGSGVGKSVL 171
>UniRef50_Q85X23 Cluster: ORF56b; n=1; Pinus koraiensis|Rep: ORF56b
- Pinus koraiensis (Korean pine)
Length = 56
Score = 33.5 bits (73), Expect = 5.5
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -1
Query: 483 SIGPLPSIGFPKASTTRPRICSPTGTSTIAPV 388
S GP S G P+ RPR+ PTGT APV
Sbjct: 4 STGPKLSTGSPRTLKIRPRVAPPTGTLRGAPV 35
>UniRef50_A5B5Q4 Cluster: Putative uncharacterized protein; n=1; Vitis
vinifera|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 1855
Score = 33.5 bits (73), Expect = 5.5
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 52 LLPRCQRWRYPQWPWHLANYMSQPPTKLPRSPPSSKRGSLEP 177
L+ R RW YP +PW L++Y S+ L + PSS R +P
Sbjct: 1567 LMERWARWEYPVFPWILSDYSSK---YLDLADPSSYRDLSKP 1605
>UniRef50_UPI00015B4CD4 Cluster: PREDICTED: similar to
ENSANGP00000024697; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000024697 - Nasonia
vitripennis
Length = 1018
Score = 33.1 bits (72), Expect = 7.3
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +2
Query: 293 LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPI 463
L G + L D+ + V+ + + GD V+RTG + + + +LG + D + P+
Sbjct: 449 LLGEVIRLNGDSATIQVYEDTSGLAVGDPVRRTGRPLSIELAPGLLGSIFDGIQRPL 505
>UniRef50_Q8A876 Cluster: V-type ATP synthase subunit B; n=9;
Bacteroidales|Rep: V-type ATP synthase subunit B -
Bacteroides thetaiotaomicron
Length = 441
Score = 33.1 bits (72), Expect = 7.3
Identities = 22/74 (29%), Positives = 34/74 (45%)
Frame = +2
Query: 287 SGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 466
+G + + D+V + VF + I V G + V EQ+ GR +A G+PID
Sbjct: 37 NGKLAQVVKIAGDDVTLQVFEGTEGIPTNAEVVFLGKSPTLKVSEQLAGRFFNAFGDPID 96
Query: 467 GKGPIDTKSRMRVG 508
G GP + +G
Sbjct: 97 G-GPEIEGQEVEIG 109
>UniRef50_Q81SH1 Cluster: Flagellum-specific ATP synthase, putative;
n=20; Bacillales|Rep: Flagellum-specific ATP synthase,
putative - Bacillus anthracis
Length = 434
Score = 33.1 bits (72), Expect = 7.3
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +1
Query: 532 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
R + + +TGIK++DS++ IG GQ+ I GK+ L
Sbjct: 135 REEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKSTL 174
>UniRef50_Q5LWX0 Cluster: H+-transporting two-sector ATPase,
flagellum-specific; n=17; Rhodobacteraceae|Rep:
H+-transporting two-sector ATPase, flagellum-specific -
Silicibacter pomeroyi
Length = 445
Score = 33.1 bits (72), Expect = 7.3
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 517 PIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
P + R + + M TG+ A+++L+PI RGQR + GK++L
Sbjct: 132 PPAVQRKPLGQRMATGLAALNTLLPIVRGQRVGLFAGSGVGKSSL 176
>UniRef50_Q2SEY6 Cluster: Flagellum-specific ATP synthase; n=1;
Hahella chejuensis KCTC 2396|Rep: Flagellum-specific ATP
synthase - Hahella chejuensis (strain KCTC 2396)
Length = 416
Score = 33.1 bits (72), Expect = 7.3
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 362 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDG 469
I G V TG V V + +LG+VV+A G P+DG
Sbjct: 56 IHVGSEVVATGLPASVTVNDGMLGKVVNAFGTPLDG 91
>UniRef50_Q2S040 Cluster: Transcription termination factor rho; n=1;
Salinibacter ruber DSM 13855|Rep: Transcription
termination factor rho - Salinibacter ruber (strain DSM
13855)
Length = 373
Score = 33.1 bits (72), Expect = 7.3
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 565 IKAVDSLVPIGRGQRELIIGDRQTGKTALAID 660
++ +D + P+G+GQR LI+ + GKT L D
Sbjct: 113 MRVLDLVAPLGKGQRALIVSPPRAGKTVLLKD 144
>UniRef50_Q9F696 Cluster: Flagella-specific ATPase; n=16;
Alphaproteobacteria|Rep: Flagella-specific ATPase -
Bartonella bacilliformis
Length = 315
Score = 33.1 bits (72), Expect = 7.3
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +1
Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690
AP + R V ++TG+K +D P+ GQR I GK+ L + ++ F+K
Sbjct: 7 APPALARARVGNGLRTGVKVIDIFTPLCFGQRIGIFSGSGVGKSTL-LSMMMQADHFDK 64
>UniRef50_Q1AVG2 Cluster: Transcription termination factor Rho; n=1;
Rubrobacter xylanophilus DSM 9941|Rep: Transcription
termination factor Rho - Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129)
Length = 498
Score = 33.1 bits (72), Expect = 7.3
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 547 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
+P + +D + PIG+GQR LI+ + GKT +
Sbjct: 229 KPNDIAPRVIDLVAPIGKGQRGLIVSPPKAGKTTI 263
>UniRef50_A4M4Z8 Cluster: Putative uncharacterized protein; n=1;
Geobacter bemidjiensis Bem|Rep: Putative uncharacterized
protein - Geobacter bemidjiensis Bem
Length = 519
Score = 33.1 bits (72), Expect = 7.3
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = -3
Query: 493 GFRVDWSLAINRVSQSVYYTPKDLLSDGNVYDSTSTLDNISFFDKLVITKYYHTHIVRFQ 314
G VD + AI+RV+ V + + N+ D D ++F D + + +V +
Sbjct: 388 GVGVDRAEAIDRVTDRVDHAADQGRAYRNLDDLAGQFDRVAFLDLGELAEDRRADVVFLE 447
Query: 313 VKGHSLEA*GELHHL 269
V+ H+ +A GEL L
Sbjct: 448 VQNHAGDAAGELEEL 462
>UniRef50_A2WHW2 Cluster: Flagellar biosynthesis/type III secretory
pathway ATPase; n=3; Proteobacteria|Rep: Flagellar
biosynthesis/type III secretory pathway ATPase -
Burkholderia dolosa AUO158
Length = 476
Score = 33.1 bits (72), Expect = 7.3
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = +2
Query: 263 AEEMVEFSSG--LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGR 436
A +E +SG + + D ++ F + G V GA + +G GR
Sbjct: 83 ANARIETASGEWIDARVVGFRDDVTQLMPFRAPAGLFAGARVMPAGAGRQLTIGAAWRGR 142
Query: 437 VVDALGNPIDGKGPI 481
+VD +G P DG GP+
Sbjct: 143 IVDGMGEPFDGGGPL 157
>UniRef50_A7PWU3 Cluster: Chromosome chr19 scaffold_35, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr19 scaffold_35, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 126
Score = 33.1 bits (72), Expect = 7.3
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = -1
Query: 486 VSIGPLPSIGFPKASTTRPRICSPTGTSTIAPV 388
VS GP S G P RPR+ PTGT AP+
Sbjct: 46 VSTGPKLSTGSPSTLKIRPRVAPPTGTLRGAPL 78
>UniRef50_Q5CS50 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 856
Score = 33.1 bits (72), Expect = 7.3
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 416 GEQILGRVVDALGNPIDGKGPIDTKSRMRV 505
GE ++ + D LGN IDG+ P TKS++R+
Sbjct: 135 GESVVRGINDNLGNNIDGRTPQTTKSQVRI 164
>UniRef50_Q98QX4 Cluster: ATP SYNTHASE BETA CHAIN; n=1; Mycoplasma
pulmonis|Rep: ATP SYNTHASE BETA CHAIN - Mycoplasma
pulmonis
Length = 698
Score = 32.7 bits (71), Expect = 9.7
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 553 MQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIIN 672
++TGIK +D L+PI G + ++G GKT + + +IN
Sbjct: 341 LETGIKVIDVLLPIPSGGKTGLLGGAGVGKT-VVVQELIN 379
>UniRef50_Q7URK7 Cluster: Excinuclease ABC subunit A; n=1; Pirellula
sp.|Rep: Excinuclease ABC subunit A - Rhodopirellula
baltica
Length = 1031
Score = 32.7 bits (71), Expect = 9.7
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +1
Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTI 666
K P+ +SVR ++ VD V I RG+ +I G +GKT+LA+DT+
Sbjct: 40 KTPVTRQPISVRGCRVHNLRDVD--VDIPRGELVVICGLSGSGKTSLALDTL 89
>UniRef50_Q3IUV2 Cluster: TraG; n=1; Rhodobacter sphaeroides
2.4.1|Rep: TraG - Rhodobacter sphaeroides (strain ATCC
17023 / 2.4.1 / NCIB 8253 / DSM158)
Length = 1136
Score = 32.7 bits (71), Expect = 9.7
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 263 AEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVK-RTGAIVDVPVGEQILGRV 439
+E SG + +NL +V G ++ D +TGA + G+QI+GRV
Sbjct: 739 SEAESRLKSGGTSLDMNLNQMIGNELVRGGHNPLEVSDFFNPKTGAAMGE--GKQIVGRV 796
Query: 440 VDALGNPIDGKGPID 484
VD L N + G GP D
Sbjct: 797 VDDLVNGLVGPGPQD 811
>UniRef50_Q2S0E2 Cluster: Transcription termination factor Rho; n=1;
Salinibacter ruber DSM 13855|Rep: Transcription
termination factor Rho - Salinibacter ruber (strain DSM
13855)
Length = 472
Score = 32.7 bits (71), Expect = 9.7
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 562 GIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
G + +D PIG+GQR LI+ + GKT L
Sbjct: 213 GPRILDLFAPIGKGQRGLIVSPPKAGKTVL 242
>UniRef50_Q2RXS1 Cluster: Putative uncharacterized protein
precursor; n=1; Rhodospirillum rubrum ATCC 11170|Rep:
Putative uncharacterized protein precursor -
Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255)
Length = 293
Score = 32.7 bits (71), Expect = 9.7
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +1
Query: 520 IIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGE 696
I+ RVSV P QTG A D+L + E+II D + +T++ KG+
Sbjct: 235 ILSARVSVDPPTQTGSDAEDALAATRERRVEMIIEDAAVANGPSSDETVVGATLMAKGD 293
>UniRef50_A6VUA3 Cluster: Positive regulator of sigma E, RseC/MucC;
n=2; Marinomonas|Rep: Positive regulator of sigma E,
RseC/MucC - Marinomonas sp. MWYL1
Length = 155
Score = 32.7 bits (71), Expect = 9.7
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3
Query: 192 LEETGRVLSIGDGIARVYGLKTS 260
+EETGRVLSI DG A V ++TS
Sbjct: 2 IEETGRVLSIEDGFANVETIRTS 24
>UniRef50_A6Q2N1 Cluster: Flagellar-specific ATP synthase FliI; n=1;
Nitratiruptor sp. SB155-2|Rep: Flagellar-specific ATP
synthase FliI - Nitratiruptor sp. (strain SB155-2)
Length = 431
Score = 32.7 bits (71), Expect = 9.7
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = +1
Query: 478 NRHEIPYEGR--FKAPIIIP--RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKT 645
N+ ++ +E + K I P R ++ P+ G+++++ L IG+GQR I GK+
Sbjct: 97 NKEKLQFETKVSLKNETINPLLRERIKTPLDIGVRSINGLFTIGKGQRIGIFASAGVGKS 156
Query: 646 AL 651
L
Sbjct: 157 TL 158
>UniRef50_A5GCR1 Cluster: H+-transporting two-sector ATPase,
alpha/beta subunit, central region; n=1; Geobacter
uraniumreducens Rf4|Rep: H+-transporting two-sector
ATPase, alpha/beta subunit, central region - Geobacter
uraniumreducens Rf4
Length = 524
Score = 32.7 bits (71), Expect = 9.7
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +1
Query: 550 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
P+ TG +AVD L P+ RG + G TGKT L
Sbjct: 187 PLVTGQRAVDFLFPLARGGAAVFPGGFGTGKTVL 220
>UniRef50_A2BND1 Cluster: DNA gyrase/topoisomerase IV, subunit A;
n=5; Prochlorococcus marinus|Rep: DNA
gyrase/topoisomerase IV, subunit A - Prochlorococcus
marinus (strain AS9601)
Length = 813
Score = 32.7 bits (71), Expect = 9.7
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Frame = +2
Query: 284 SSGLK-GMALNLEPDNVGVVVFGNDKLIKEGDIV-KRTGAIV---DVPV-GEQILGRVVD 445
S+G+ GMA N+ P N+G +V G L+K DI K+ I+ D P GE I R ++
Sbjct: 170 STGIAVGMATNIPPHNLGEIVDGLVTLVKNKDISDKKLFNIIKGPDFPTGGELIYSRAIE 229
Query: 446 ALGNPIDGKGPI 481
L GKG I
Sbjct: 230 ELYQ--TGKGSI 239
>UniRef50_A2F8P6 Cluster: ABC transporter family protein; n=1;
Trichomonas vaginalis G3|Rep: ABC transporter family
protein - Trichomonas vaginalis G3
Length = 536
Score = 32.7 bits (71), Expect = 9.7
Identities = 17/30 (56%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +1
Query: 565 IKAVDSL-VPIGRGQRELIIGDRQTGKTAL 651
IKA+DSL +GRG+ LIIG +GKT L
Sbjct: 232 IKAIDSLDFTVGRGETILIIGPNGSGKTTL 261
>UniRef50_Q4PCL5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 867
Score = 32.7 bits (71), Expect = 9.7
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +1
Query: 487 EIPYEGRFKAPII-IPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDT 663
E P RF ++ + VSVR TG D + IG G+R I+G GKT L +
Sbjct: 604 EDPEASRFPGSLVHLEGVSVRYDGNTGYTINDIGLTIGPGERVGIVGPNGHGKTTL-LHC 662
Query: 664 IINQQRFNKGEDEK 705
I+ + KG E+
Sbjct: 663 IVGKLTPTKGTVER 676
>UniRef50_O94034 Cluster: Nucleotide phosphodiesterase; n=4;
Saccharomycetales|Rep: Nucleotide phosphodiesterase -
Candida albicans (Yeast)
Length = 571
Score = 32.7 bits (71), Expect = 9.7
Identities = 14/45 (31%), Positives = 29/45 (64%)
Frame = -3
Query: 397 STSTLDNISFFDKLVITKYYHTHIVRFQVKGHSLEA*GELHHLLS 263
+TS LDN+ F DK ++ +++ TH+ ++G + + G+L+ +S
Sbjct: 75 NTSKLDNLPFSDKSLLIQFFFTHLNILMIQGENSDE-GKLYQEIS 118
>UniRef50_O83541 Cluster: V-type ATP synthase alpha chain 2; n=7;
Bacteria|Rep: V-type ATP synthase alpha chain 2 -
Treponema pallidum
Length = 605
Score = 32.7 bits (71), Expect = 9.7
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +1
Query: 532 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKT 645
+++V EP+ TG +A+D P+ +G I G TGKT
Sbjct: 212 KLAVCEPLVTGQRAIDVFFPLSKGGTAAIPGGFGTGKT 249
>UniRef50_Q92HL2 Cluster: Transcription termination factor rho;
n=164; cellular organisms|Rep: Transcription termination
factor rho - Rickettsia conorii
Length = 458
Score = 32.7 bits (71), Expect = 9.7
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 568 KAVDSLVPIGRGQRELIIGDRQTGKTAL 651
+ ++ + P+G+GQR LI+ +TGKT L
Sbjct: 192 RVIELVAPMGKGQRALIVAPPRTGKTVL 219
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 779,183,803
Number of Sequences: 1657284
Number of extensions: 16998600
Number of successful extensions: 58936
Number of sequences better than 10.0: 162
Number of HSP's better than 10.0 without gapping: 54743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58792
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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