SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00252
         (738 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P25705 Cluster: ATP synthase subunit alpha, mitochondri...   163   5e-39
UniRef50_P35381 Cluster: ATP synthase subunit alpha, mitochondri...   159   7e-38
UniRef50_A0D564 Cluster: ATP synthase subunit alpha; n=1; Parame...   137   2e-31
UniRef50_Q35058 Cluster: AtpA intron2 ORF; n=8; Embryophyta|Rep:...   129   8e-29
UniRef50_UPI00005A408F Cluster: PREDICTED: similar to ATP syntha...   125   1e-27
UniRef50_Q5FRC7 Cluster: ATP synthase subunit alpha 1; n=100; ce...   118   2e-25
UniRef50_Q29596 Cluster: ATP synthase subunit alpha liver isofor...   112   1e-23
UniRef50_P45825 Cluster: ATP synthase subunit alpha; n=47; Bacte...   105   1e-21
UniRef50_Q6A8C5 Cluster: ATP synthase subunit alpha; n=2; Bacter...   102   8e-21
UniRef50_A3FPS2 Cluster: ATP synthase subunit alpha; n=2; Crypto...   101   2e-20
UniRef50_Q0SGP7 Cluster: ATP synthase subunit alpha; n=17; cellu...    97   5e-19
UniRef50_O50140 Cluster: ATP synthase subunit alpha; n=2; Firmic...    96   9e-19
UniRef50_A6PZL5 Cluster: ATP synthase subunit alpha; n=4; Leucon...    93   9e-18
UniRef50_Q9PR12 Cluster: ATP synthase subunit alpha; n=1037; cel...    92   1e-17
UniRef50_Q9AHX2 Cluster: ATP synthase alpha subunit; n=10; Candi...    90   5e-17
UniRef50_Q21Z99 Cluster: ATP synthase subunit alpha 2; n=22; cel...    90   6e-17
UniRef50_Q4QJF1 Cluster: ATPase alpha subunit; n=9; Trypanosomat...    88   2e-16
UniRef50_A3JAC3 Cluster: F0F1 ATP synthase subunit alpha; n=3; P...    81   2e-14
UniRef50_Q9BBC2 Cluster: ATPase CF1 alpha subunit; n=4; Dinophyc...    81   2e-14
UniRef50_Q62EB0 Cluster: ATP synthase subunit alpha 2; n=25; Pro...    81   2e-14
UniRef50_Q9TAH9 Cluster: ATP synthase subunit alpha; n=1; Cafete...    81   4e-14
UniRef50_Q92FH0 Cluster: ATP synthase subunit alpha 1; n=13; Lis...    78   2e-13
UniRef50_Q1PVR1 Cluster: Strongly similar to ATPA gene encoding ...    77   6e-13
UniRef50_Q6KHZ3 Cluster: ATP synthase alpha chain; n=1; Mycoplas...    76   1e-12
UniRef50_Q603U2 Cluster: ATP synthase subunit alpha 2; n=6; Prot...    76   1e-12
UniRef50_Q9G8S6 Cluster: ATP synthase F1 subunit alpha; n=1; Nae...    73   6e-12
UniRef50_UPI0000EB1FE1 Cluster: UPI0000EB1FE1 related cluster; n...    71   2e-11
UniRef50_A5IY82 Cluster: ATP synthase alpha chain; n=6; Mycoplas...    71   2e-11
UniRef50_Q98QX5 Cluster: ATP SYNTHASE ALPHA CHAIN; n=2; Mycoplas...    70   7e-11
UniRef50_Q4A6P2 Cluster: ATP synthase alpha chain; n=2; Mycoplas...    70   7e-11
UniRef50_Q98QB7 Cluster: ATP synthase subunit alpha 2; n=1; Myco...    69   9e-11
UniRef50_Q98PM2 Cluster: ATP SYNTHASE ALPHA CHAIN; n=1; Mycoplas...    69   1e-10
UniRef50_Q9XXK1-2 Cluster: Isoform b of Q9XXK1 ; n=1; Caenorhabd...    68   3e-10
UniRef50_Q600H8 Cluster: ATP synthase alpha chain; n=3; Mycoplas...    66   1e-09
UniRef50_Q2F981 Cluster: Ribosomal protein S2; n=3; Oryza sativa...    64   3e-09
UniRef50_A0VM48 Cluster: Putative uncharacterized protein; n=3; ...    62   1e-08
UniRef50_A7DHD0 Cluster: Putative uncharacterized protein; n=2; ...    56   7e-07
UniRef50_A3L181 Cluster: ATP synthase beta chain; n=3; Gammaprot...    55   2e-06
UniRef50_Q8R9Z1 Cluster: Flagellar biosynthesis/type III secreto...    54   5e-06
UniRef50_A0NUS5 Cluster: Putative uncharacterized protein; n=1; ...    54   5e-06
UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondria...    51   3e-05
UniRef50_Q01D41 Cluster: ATP synthase alpha chain, sodium ion sp...    50   6e-05
UniRef50_Q93UD9 Cluster: ATP synthase beta subunit; n=12; Candid...    50   8e-05
UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellul...    49   1e-04
UniRef50_Q67K17 Cluster: Flagellar-specific ATP synthase; n=1; S...    48   2e-04
UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondria...    48   2e-04
UniRef50_P38168 Cluster: Putative uncharacterized protein YBL100...    47   4e-04
UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellu...    47   4e-04
UniRef50_Q6BRW4 Cluster: Debaryomyces hansenii chromosome D of s...    47   6e-04
UniRef50_Q98PM3 Cluster: ATP SYNTHASE BETA CHAIN; n=9; Mycoplasm...    46   7e-04
UniRef50_Q9RQ79 Cluster: Beta subunit of membrane-bound ATP synt...    46   7e-04
UniRef50_A5KSP4 Cluster: Sodium-transporting two-sector ATPase; ...    46   7e-04
UniRef50_A3IIS5 Cluster: Putative uncharacterized protein; n=1; ...    46   7e-04
UniRef50_A6DUD8 Cluster: F0F1 ATP synthase subunit beta; n=1; Le...    46   0.001
UniRef50_Q1GNY4 Cluster: ATPase FliI/YscN; n=6; Bacteria|Rep: AT...    45   0.002
UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondr...    45   0.002
UniRef50_Q1IR49 Cluster: ATPase FliI/YscN; n=1; Acidobacteria ba...    44   0.003
UniRef50_O83417 Cluster: Flagellum-specific ATP synthase; n=42; ...    44   0.003
UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellu...    44   0.003
UniRef50_Q1NYL2 Cluster: ATP synthase beta chain; n=1; Candidatu...    44   0.004
UniRef50_Q12T73 Cluster: ATPase FliI/YscN; n=1; Shewanella denit...    44   0.005
UniRef50_Q9RQ76 Cluster: Beta subunit of membrane-bound ATP synt...    43   0.009
UniRef50_Q6D5F7 Cluster: Type III secretion protein; n=10; Enter...    42   0.012
UniRef50_Q02C61 Cluster: ATPase, FliI/YscN family; n=2; Bacteria...    42   0.012
UniRef50_A7CYE2 Cluster: Flagellar protein export ATPase FliI; n...    42   0.012
UniRef50_P0A1B9 Cluster: Probable ATP synthase spaL; n=32; Prote...    42   0.012
UniRef50_P55717 Cluster: Probable ATP synthase y4yI; n=27; Bacte...    42   0.016
UniRef50_A5D0F3 Cluster: Flagellar biosynthesis/type III secreto...    41   0.028
UniRef50_Q971B7 Cluster: V-type ATP synthase alpha chain; n=11; ...    41   0.036
UniRef50_Q8F319 Cluster: Flagellum-specific ATP synthase fliI; n...    40   0.048
UniRef50_Q7UIJ0 Cluster: Flagellum-specific ATP synthase; n=3; P...    40   0.048
UniRef50_O07025 Cluster: Flagellum-specific ATP synthase; n=24; ...    40   0.048
UniRef50_P23445 Cluster: Flagellum-specific ATP synthase; n=18; ...    40   0.048
UniRef50_A3WGS0 Cluster: FliI, Flagellum-specific ATPase; n=2; E...    40   0.064
UniRef50_A6CBM4 Cluster: Transcription termination factor Rho; n...    40   0.084
UniRef50_Q4IW70 Cluster: ATP synthase F1, beta subunit; n=1; Azo...    39   0.11 
UniRef50_A5IFJ3 Cluster: ATP synthase F1, beta chain; n=3; Legio...    39   0.11 
UniRef50_A7R4X8 Cluster: Chromosome undetermined scaffold_808, w...    39   0.11 
UniRef50_O67531 Cluster: Flagellum-specific ATP synthase; n=2; A...    39   0.11 
UniRef50_A2WHU5 Cluster: Flagellar biosynthesis/type III secreto...    39   0.15 
UniRef50_Q9PLK9 Cluster: Virulence ATPase, putative; n=9; Chlamy...    38   0.19 
UniRef50_A6DIN5 Cluster: Transcription termination factor Rho; n...    38   0.19 
UniRef50_Q8TUT0 Cluster: V-type ATP synthase beta chain (EC 3.6....    38   0.19 
UniRef50_Q8KKY7 Cluster: Type III secretion system ATP synthase ...    38   0.26 
UniRef50_A1SEP6 Cluster: ATPase, FliI/YscN family; n=10; Bacteri...    38   0.26 
UniRef50_P74857 Cluster: Probable secretion system apparatus ATP...    38   0.26 
UniRef50_Q53153 Cluster: FliI protein; n=7; Rhodobacteraceae|Rep...    38   0.34 
UniRef50_Q1FJZ5 Cluster: Transcription termination factor Rho; n...    38   0.34 
UniRef50_A2W3Z6 Cluster: ATPase FliI/YscN; n=1; Burkholderia cen...    38   0.34 
UniRef50_Q5SJE9 Cluster: Transcription termination factor Rho; n...    37   0.45 
UniRef50_Q55738 Cluster: DNA gyrase subunit A; n=37; Cyanobacter...    37   0.45 
UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellul...    37   0.45 
UniRef50_Q74G36 Cluster: Flagellum-specific ATP synthase FliI; n...    37   0.59 
UniRef50_Q62EB7 Cluster: ATP synthase F1, beta subunit; n=27; Ba...    37   0.59 
UniRef50_A3Z0H3 Cluster: V-type ATPase, A subunit; n=5; Bacteria...    37   0.59 
UniRef50_Q98QB6 Cluster: ATP synthase subunit beta 2; n=5; Mycop...    37   0.59 
UniRef50_UPI00004D9CFE Cluster: FH1/FH2 domain-containing protei...    36   0.78 
UniRef50_Q9FC33 Cluster: Putative transcription terminator facto...    36   0.78 
UniRef50_Q058C4 Cluster: Flagellum-specific ATP synthase; n=1; B...    36   0.78 
UniRef50_A7M2K2 Cluster: Putative uncharacterized protein; n=1; ...    36   0.78 
UniRef50_P52607 Cluster: Flagellum-specific ATP synthase; n=3; B...    36   0.78 
UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5; Bactero...    36   0.78 
UniRef50_UPI00015B5329 Cluster: PREDICTED: similar to GA14484-PA...    36   1.0  
UniRef50_Q8F7C5 Cluster: Transcription termination factor rho; n...    36   1.0  
UniRef50_Q0EZL2 Cluster: Flagellum-specific ATP synthase; n=1; M...    36   1.0  
UniRef50_P15313 Cluster: Vacuolar ATP synthase subunit B, kidney...    36   1.0  
UniRef50_P38606 Cluster: Vacuolar ATP synthase catalytic subunit...    36   1.0  
UniRef50_P84582 Cluster: ATP synthase subunit alpha; n=1; Populu...    36   1.0  
UniRef50_UPI0000E823B4 Cluster: PREDICTED: similar to vacuolar p...    36   1.4  
UniRef50_Q6KIC3 Cluster: ATP synthase beta chain; n=1; Mycoplasm...    36   1.4  
UniRef50_Q2IQ94 Cluster: Sodium-transporting two-sector ATPase; ...    36   1.4  
UniRef50_A0Z379 Cluster: ATPase FliI/YscN; n=1; marine gamma pro...    36   1.4  
UniRef50_Q8ZXR2 Cluster: V-type ATP synthase beta chain; n=5; Ar...    36   1.4  
UniRef50_A3ZQF8 Cluster: Transcription termination factor Rho; n...    35   1.8  
UniRef50_A7DBR8 Cluster: Transport system permease protein; n=3;...    35   2.4  
UniRef50_Q25691 Cluster: Vacuolar ATP synthase subunit B; n=25; ...    35   2.4  
UniRef50_P45835 Cluster: Transcription termination factor rho; n...    35   2.4  
UniRef50_Q4RR34 Cluster: Chromosome 14 SCAF15003, whole genome s...    34   3.2  
UniRef50_Q8NR58 Cluster: Transcription termination factor; n=3; ...    34   3.2  
UniRef50_A7CZI2 Cluster: H+transporting two-sector ATPase alpha/...    34   3.2  
UniRef50_A1EBU5 Cluster: SctN; n=1; Lysobacter enzymogenes|Rep: ...    34   3.2  
UniRef50_Q9PK86 Cluster: V-type ATP synthase beta chain; n=19; B...    34   3.2  
UniRef50_P52157 Cluster: Transcription termination factor rho; n...    34   3.2  
UniRef50_O67031 Cluster: Transcription termination factor rho; n...    34   3.2  
UniRef50_Q08637 Cluster: V-type sodium ATP synthase subunit B (E...    34   3.2  
UniRef50_Q52371 Cluster: Type III secretion ATP synthase hrcN; n...    34   3.2  
UniRef50_P26465 Cluster: Flagellum-specific ATP synthase; n=258;...    34   3.2  
UniRef50_UPI00005F655A Cluster: COG1157: Flagellar biosynthesis/...    34   4.2  
UniRef50_Q9MTQ2 Cluster: ATP synthase subunit beta; n=2; Amphidi...    34   4.2  
UniRef50_A6RD01 Cluster: Putative uncharacterized protein; n=1; ...    34   4.2  
UniRef50_Q141X8 Cluster: ATPase FliI/YscN; n=1; Burkholderia xen...    33   5.5  
UniRef50_A6VWI3 Cluster: H+transporting two-sector ATPase alpha/...    33   5.5  
UniRef50_A3SFS3 Cluster: Flagellum-specific ATP synthase; n=2; S...    33   5.5  
UniRef50_A1T0I0 Cluster: ATPase, FliI/YscN family protein; n=1; ...    33   5.5  
UniRef50_Q85X23 Cluster: ORF56b; n=1; Pinus koraiensis|Rep: ORF5...    33   5.5  
UniRef50_A5B5Q4 Cluster: Putative uncharacterized protein; n=1; ...    33   5.5  
UniRef50_UPI00015B4CD4 Cluster: PREDICTED: similar to ENSANGP000...    33   7.3  
UniRef50_Q8A876 Cluster: V-type ATP synthase subunit B; n=9; Bac...    33   7.3  
UniRef50_Q81SH1 Cluster: Flagellum-specific ATP synthase, putati...    33   7.3  
UniRef50_Q5LWX0 Cluster: H+-transporting two-sector ATPase, flag...    33   7.3  
UniRef50_Q2SEY6 Cluster: Flagellum-specific ATP synthase; n=1; H...    33   7.3  
UniRef50_Q2S040 Cluster: Transcription termination factor rho; n...    33   7.3  
UniRef50_Q9F696 Cluster: Flagella-specific ATPase; n=16; Alphapr...    33   7.3  
UniRef50_Q1AVG2 Cluster: Transcription termination factor Rho; n...    33   7.3  
UniRef50_A4M4Z8 Cluster: Putative uncharacterized protein; n=1; ...    33   7.3  
UniRef50_A2WHW2 Cluster: Flagellar biosynthesis/type III secreto...    33   7.3  
UniRef50_A7PWU3 Cluster: Chromosome chr19 scaffold_35, whole gen...    33   7.3  
UniRef50_Q5CS50 Cluster: Putative uncharacterized protein; n=2; ...    33   7.3  
UniRef50_Q98QX4 Cluster: ATP SYNTHASE BETA CHAIN; n=1; Mycoplasm...    33   9.7  
UniRef50_Q7URK7 Cluster: Excinuclease ABC subunit A; n=1; Pirell...    33   9.7  
UniRef50_Q3IUV2 Cluster: TraG; n=1; Rhodobacter sphaeroides 2.4....    33   9.7  
UniRef50_Q2S0E2 Cluster: Transcription termination factor Rho; n...    33   9.7  
UniRef50_Q2RXS1 Cluster: Putative uncharacterized protein precur...    33   9.7  
UniRef50_A6VUA3 Cluster: Positive regulator of sigma E, RseC/Muc...    33   9.7  
UniRef50_A6Q2N1 Cluster: Flagellar-specific ATP synthase FliI; n...    33   9.7  
UniRef50_A5GCR1 Cluster: H+-transporting two-sector ATPase, alph...    33   9.7  
UniRef50_A2BND1 Cluster: DNA gyrase/topoisomerase IV, subunit A;...    33   9.7  
UniRef50_A2F8P6 Cluster: ABC transporter family protein; n=1; Tr...    33   9.7  
UniRef50_Q4PCL5 Cluster: Putative uncharacterized protein; n=1; ...    33   9.7  
UniRef50_O94034 Cluster: Nucleotide phosphodiesterase; n=4; Sacc...    33   9.7  
UniRef50_O83541 Cluster: V-type ATP synthase alpha chain 2; n=7;...    33   9.7  
UniRef50_Q92HL2 Cluster: Transcription termination factor rho; n...    33   9.7  

>UniRef50_P25705 Cluster: ATP synthase subunit alpha, mitochondrial
           precursor; n=489; cellular organisms|Rep: ATP synthase
           subunit alpha, mitochondrial precursor - Homo sapiens
           (Human)
          Length = 553

 Score =  163 bits (395), Expect = 5e-39
 Identities = 77/89 (86%), Positives = 85/89 (95%)
 Frame = +2

Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427
           L ++QAEEMVEFSSGLKGM+LNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGE++
Sbjct: 87  LRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEEL 146

Query: 428 LGRVVDALGNPIDGKGPIDTKSRMRVGLR 514
           LGRVVDALGN IDGKGPI +K+R RVGL+
Sbjct: 147 LGRVVDALGNAIDGKGPIGSKTRRRVGLK 175



 Score =  144 bits (349), Expect = 2e-33
 Identities = 68/76 (89%), Positives = 72/76 (94%)
 Frame = +1

Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690
           KAP IIPR+SVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKT++AIDTIINQ+RFN 
Sbjct: 175 KAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFND 234

Query: 691 GEDEKKKLYCIYVVIG 738
           G DEKKKLYCIYV IG
Sbjct: 235 GSDEKKKLYCIYVAIG 250



 Score = 87.0 bits (206), Expect = 4e-16
 Identities = 47/88 (53%), Positives = 57/88 (64%), Gaps = 4/88 (4%)
 Frame = +3

Query: 3   LISARIAGSVARRLPNAATQVSKXXXXXXXXXSRKLHVSTTHK----AAEISTILEERIL 170
           ++S R+A +V R LP  A  VS+         +R  H S TH      AE+S+ILEERIL
Sbjct: 1   MLSVRVAAAVVRALPRRAGLVSRNALGSSFIAARNFHASNTHLQKTGTAEMSSILEERIL 60

Query: 171 GAAPKADLEETGRVLSIGDGIARVYGLK 254
           GA    DLEETGRVLSIGDGIARV+GL+
Sbjct: 61  GADTSVDLEETGRVLSIGDGIARVHGLR 88


>UniRef50_P35381 Cluster: ATP synthase subunit alpha, mitochondrial
           precursor; n=847; cellular organisms|Rep: ATP synthase
           subunit alpha, mitochondrial precursor - Drosophila
           melanogaster (Fruit fly)
          Length = 552

 Score =  159 bits (386), Expect = 7e-38
 Identities = 75/89 (84%), Positives = 84/89 (94%)
 Frame = +2

Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427
           L +IQA+EMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIK+GDIVKRTGAIVDVPVG+++
Sbjct: 86  LNNIQADEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKQGDIVKRTGAIVDVPVGDEL 145

Query: 428 LGRVVDALGNPIDGKGPIDTKSRMRVGLR 514
           LGRVVDALGN IDGKG I+TK R RVG++
Sbjct: 146 LGRVVDALGNAIDGKGAINTKDRFRVGIK 174



 Score =  144 bits (348), Expect = 3e-33
 Identities = 69/76 (90%), Positives = 72/76 (94%)
 Frame = +1

Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690
           KAP IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQ+RFN+
Sbjct: 174 KAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKRFNE 233

Query: 691 GEDEKKKLYCIYVVIG 738
            +DE KKLYCIYV IG
Sbjct: 234 AQDESKKLYCIYVAIG 249



 Score =  111 bits (267), Expect = 2e-23
 Identities = 58/84 (69%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
 Frame = +3

Query: 3   LISARIAGSVARRLPNAATQVS-KXXXXXXXXXSRKLHVSTTHKAAEISTILEERILGAA 179
           + SAR+A SVAR LP AA QV+ K         +RKLHV++T ++AEIS ILEERILG A
Sbjct: 3   IFSARLASSVARNLPKAANQVACKAAYPAASLAARKLHVASTQRSAEISNILEERILGVA 62

Query: 180 PKADLEETGRVLSIGDGIARVYGL 251
           PKADLEETGRVLSIGDGIARVYGL
Sbjct: 63  PKADLEETGRVLSIGDGIARVYGL 86


>UniRef50_A0D564 Cluster: ATP synthase subunit alpha; n=1;
           Paramecium tetraurelia|Rep: ATP synthase subunit alpha -
           Paramecium tetraurelia
          Length = 612

 Score =  137 bits (332), Expect = 2e-31
 Identities = 64/89 (71%), Positives = 76/89 (85%)
 Frame = +2

Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427
           L  +QA EMVEFSSG++GMALNLE DNVG+VV GND+ I+EGDIVKRTGAIVDVP+G ++
Sbjct: 67  LTQVQAGEMVEFSSGVRGMALNLETDNVGIVVLGNDREIQEGDIVKRTGAIVDVPIGMEM 126

Query: 428 LGRVVDALGNPIDGKGPIDTKSRMRVGLR 514
           LGRV DALGNPIDG GP+ T +R RV L+
Sbjct: 127 LGRVFDALGNPIDGHGPVKTNTRRRVELK 155



 Score =  121 bits (291), Expect = 2e-26
 Identities = 61/77 (79%), Positives = 67/77 (87%), Gaps = 1/77 (1%)
 Frame = +1

Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQ-RFN 687
           KAP IIPR SV EPMQTG+KAVD LVPIGRGQRELIIGDRQTGKTA+AIDTIINQ+  F+
Sbjct: 155 KAPGIIPRKSVHEPMQTGLKAVDCLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKPNFD 214

Query: 688 KGEDEKKKLYCIYVVIG 738
            G D+ K+LYCIYV IG
Sbjct: 215 SG-DKNKQLYCIYVAIG 230



 Score = 35.9 bits (79), Expect = 1.0
 Identities = 15/21 (71%), Positives = 19/21 (90%)
 Frame = +3

Query: 189 DLEETGRVLSIGDGIARVYGL 251
           D++E G V+SIGDGIARV+GL
Sbjct: 47  DIKEYGTVISIGDGIARVFGL 67


>UniRef50_Q35058 Cluster: AtpA intron2 ORF; n=8; Embryophyta|Rep:
           AtpA intron2 ORF - Marchantia polymorpha (Liverwort)
          Length = 1259

 Score =  129 bits (311), Expect = 8e-29
 Identities = 62/89 (69%), Positives = 74/89 (83%)
 Frame = +2

Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427
           L  IQA EMVEF+SG+KGMALNLE +NVG+V+FG+D  IKEGDIVKRTG+IVDVPVG+ +
Sbjct: 45  LNKIQAGEMVEFASGVKGMALNLENENVGIVIFGSDTAIKEGDIVKRTGSIVDVPVGKGM 104

Query: 428 LGRVVDALGNPIDGKGPIDTKSRMRVGLR 514
           LGRVVDALG PIDGKG +    R RV ++
Sbjct: 105 LGRVVDALGVPIDGKGALSAVERRRVEVK 133



 Score =  121 bits (291), Expect = 2e-26
 Identities = 58/77 (75%), Positives = 67/77 (87%), Gaps = 1/77 (1%)
 Frame = +1

Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFN- 687
           KAP II R SV EPMQTG+KAVDSLVPIGRGQRELIIGDRQTGKTA+AIDTI+NQ++ N 
Sbjct: 133 KAPGIIARKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINA 192

Query: 688 KGEDEKKKLYCIYVVIG 738
           +G  + +KLYC+YV IG
Sbjct: 193 QGTSDSEKLYCVYVAIG 209



 Score = 53.2 bits (122), Expect = 6e-06
 Identities = 24/39 (61%), Positives = 31/39 (79%)
 Frame = +3

Query: 135 AEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGL 251
           AE+ST+LE+RI     K  ++E GRV+S+GDGIARVYGL
Sbjct: 7   AELSTLLEQRITNYYTKLQVDEIGRVVSVGDGIARVYGL 45


>UniRef50_UPI00005A408F Cluster: PREDICTED: similar to ATP synthase
           alpha chain, mitochondrial precursor; n=1; Canis lupus
           familiaris|Rep: PREDICTED: similar to ATP synthase alpha
           chain, mitochondrial precursor - Canis familiaris
          Length = 301

 Score =  125 bits (302), Expect = 1e-27
 Identities = 60/76 (78%), Positives = 66/76 (86%)
 Frame = +1

Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690
           K P IIP +SVREPM+TGIKAVDSLVPIGRGQ ELII + QTGKT++AIDTIINQ+  N 
Sbjct: 71  KGPGIIPPISVREPMKTGIKAVDSLVPIGRGQHELIISNWQTGKTSIAIDTIINQKHLND 130

Query: 691 GEDEKKKLYCIYVVIG 738
           G DEKKKLYCIYVVIG
Sbjct: 131 GTDEKKKLYCIYVVIG 146



 Score =  111 bits (267), Expect = 2e-23
 Identities = 53/71 (74%), Positives = 60/71 (84%)
 Frame = +2

Query: 302 MALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 481
           M+LNL PD VGVVVFGNDKLIKEGDIVKRT A VDVPVG+++ G VVDALGN  DGKGPI
Sbjct: 1   MSLNLGPDKVGVVVFGNDKLIKEGDIVKRTEATVDVPVGKELPGHVVDALGNATDGKGPI 60

Query: 482 DTKSRMRVGLR 514
            +K+  RVGL+
Sbjct: 61  GSKTHRRVGLK 71


>UniRef50_Q5FRC7 Cluster: ATP synthase subunit alpha 1; n=100;
           cellular organisms|Rep: ATP synthase subunit alpha 1 -
           Gluconobacter oxydans (Gluconobacter suboxydans)
          Length = 511

 Score =  118 bits (284), Expect = 2e-25
 Identities = 56/76 (73%), Positives = 63/76 (82%)
 Frame = +1

Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690
           KAP I+PR SV EPMQTGIKA+D+LVPIGRGQRELIIGDRQTGKTA+ IDTI+ Q+  N 
Sbjct: 133 KAPGIMPRQSVSEPMQTGIKAIDALVPIGRGQRELIIGDRQTGKTAILIDTIVAQKPVNA 192

Query: 691 GEDEKKKLYCIYVVIG 738
             D KK LYCIYV +G
Sbjct: 193 EGDPKKSLYCIYVAVG 208



 Score =  109 bits (261), Expect = 9e-23
 Identities = 52/79 (65%), Positives = 65/79 (82%), Gaps = 1/79 (1%)
 Frame = +2

Query: 248 LEDIQAEEMVEFS-SGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQ 424
           L ++ A EMVEF  +GLKGMALNLE DNVGVV+FG+   I+EGD V RT ++V+VPVG+ 
Sbjct: 44  LTNVMAGEMVEFEGTGLKGMALNLEADNVGVVLFGDGDSIREGDTVLRTKSVVEVPVGKG 103

Query: 425 ILGRVVDALGNPIDGKGPI 481
           +LGRVVD LGNPIDG+GP+
Sbjct: 104 LLGRVVDGLGNPIDGRGPL 122



 Score = 47.2 bits (107), Expect = 4e-04
 Identities = 24/41 (58%), Positives = 29/41 (70%)
 Frame = +3

Query: 129 KAAEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGL 251
           + AEIS IL+++I        + ETG VLSIGDGIARVYGL
Sbjct: 4   RPAEISDILKQQIASFDQVETVSETGTVLSIGDGIARVYGL 44


>UniRef50_Q29596 Cluster: ATP synthase subunit alpha liver isoform,
           mitochondrial precursor; n=20; cellular organisms|Rep:
           ATP synthase subunit alpha liver isoform, mitochondrial
           precursor - Sus scrofa (Pig)
          Length = 148

 Score =  112 bits (269), Expect = 1e-23
 Identities = 53/58 (91%), Positives = 56/58 (96%)
 Frame = +2

Query: 260 QAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILG 433
           QAEEMVEFSSGLKGM+LNLEPDNVGVVVFGNDKLIKEGDIVKRTG IVDVPVG+ +LG
Sbjct: 91  QAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGXIVDVPVGKDLLG 148



 Score = 82.6 bits (195), Expect = 9e-15
 Identities = 46/88 (52%), Positives = 55/88 (62%), Gaps = 4/88 (4%)
 Frame = +3

Query: 3   LISARIAGSVARRLPNAATQVSKXXXXXXXXXSRKLHVSTTHK----AAEISTILEERIL 170
           ++S R+A +VAR LP  A  VSK         +  LH S T       AE+S+ILE RIL
Sbjct: 1   MLSVRVAAAVARXLPRRAGXVSKNALGSSFVAAXNLHASNTRLQKTGTAEVSSILEXRIL 60

Query: 171 GAAPKADLEETGRVLSIGDGIARVYGLK 254
           GA    DLEETGRVLSIGDGIARV+G +
Sbjct: 61  GADTSVDLEETGRVLSIGDGIARVHGXR 88


>UniRef50_P45825 Cluster: ATP synthase subunit alpha; n=47;
           Bacteria|Rep: ATP synthase subunit alpha - Mycobacterium
           leprae
          Length = 558

 Score =  105 bits (251), Expect = 1e-21
 Identities = 47/96 (48%), Positives = 70/96 (72%)
 Frame = +1

Query: 451 GKPY*WQGTNRHEIPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDR 630
           G+P   +G    E       +AP ++ R SV+EP+QTGIKA+D++ PIGRGQR+L+IGDR
Sbjct: 115 GQPIDGRGDIEAEARRALELQAPSVVQRQSVKEPLQTGIKAIDAMTPIGRGQRQLVIGDR 174

Query: 631 QTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVVIG 738
           +TGKTA+ +DTI+NQ++  +  D K+++ C+YV IG
Sbjct: 175 KTGKTAVCVDTILNQRQNWESGDPKRQVRCVYVAIG 210



 Score = 95.5 bits (227), Expect = 1e-18
 Identities = 43/89 (48%), Positives = 63/89 (70%)
 Frame = +2

Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427
           L  +  +E++EF  G+ G+ALNL+  NVG V+ G+ + IKEG  VKRTG ++ VPVGE  
Sbjct: 47  LPSVMTQELLEFPGGILGVALNLDEHNVGAVILGDFENIKEGQKVKRTGDVLSVPVGEAF 106

Query: 428 LGRVVDALGNPIDGKGPIDTKSRMRVGLR 514
           +GRVV+ LG PIDG+G I+ ++R  + L+
Sbjct: 107 MGRVVNPLGQPIDGRGDIEAEARRALELQ 135


>UniRef50_Q6A8C5 Cluster: ATP synthase subunit alpha; n=2;
           Bacteria|Rep: ATP synthase subunit alpha -
           Propionibacterium acnes
          Length = 545

 Score =  102 bits (245), Expect = 8e-21
 Identities = 46/72 (63%), Positives = 61/72 (84%)
 Frame = +1

Query: 523 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDE 702
           ++ R  VREP+QTG+KA+DS++PIGRGQR+LIIGDR+TGKTA+AIDTIINQ+   +  D 
Sbjct: 141 VMDRQEVREPLQTGLKAIDSMIPIGRGQRQLIIGDRKTGKTAIAIDTIINQKGNWESGDP 200

Query: 703 KKKLYCIYVVIG 738
           +K++ CIYV IG
Sbjct: 201 QKQVRCIYVAIG 212



 Score = 86.6 bits (205), Expect = 6e-16
 Identities = 41/78 (52%), Positives = 52/78 (66%)
 Frame = +2

Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427
           L    A E++ F +G  G+ALNLE   +GVVV G+   I EG  V+ TG ++ VPVGE  
Sbjct: 48  LPSAMANELLRFENGTMGIALNLEERQIGVVVLGDSDGIDEGSTVRGTGEVLSVPVGEGY 107

Query: 428 LGRVVDALGNPIDGKGPI 481
           LGRVVDA+GNP+DG G I
Sbjct: 108 LGRVVDAMGNPVDGLGEI 125


>UniRef50_A3FPS2 Cluster: ATP synthase subunit alpha; n=2;
           Cryptosporidium|Rep: ATP synthase subunit alpha -
           Cryptosporidium parvum Iowa II
          Length = 639

 Score =  101 bits (241), Expect = 2e-20
 Identities = 47/89 (52%), Positives = 66/89 (74%)
 Frame = +2

Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427
           +  ++  E+VEFSSG KGMALNLE D+VG+V+ G D+ I++GD V  T  IV+ PVG+++
Sbjct: 166 IRSVKYGELVEFSSGEKGMALNLENDHVGIVILGEDRNIRKGDQVISTNTIVNCPVGKEL 225

Query: 428 LGRVVDALGNPIDGKGPIDTKSRMRVGLR 514
           LGRVVDALGNPIDGK  I +  +  + ++
Sbjct: 226 LGRVVDALGNPIDGKPSIISLEKREIDVK 254



 Score = 92.7 bits (220), Expect = 9e-18
 Identities = 44/76 (57%), Positives = 57/76 (75%)
 Frame = +1

Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690
           KAP I+ R  + E + TGIK +DSL+PIG GQRE I+GDRQTGKT+L +D I+NQ++F  
Sbjct: 254 KAPGIMDRKPINEQLITGIKFIDSLIPIGLGQREAIVGDRQTGKTSLVLDIILNQRKFY- 312

Query: 691 GEDEKKKLYCIYVVIG 738
            +D K + YCIYV IG
Sbjct: 313 -DDIKTRKYCIYVAIG 327


>UniRef50_Q0SGP7 Cluster: ATP synthase subunit alpha; n=17; cellular
           organisms|Rep: ATP synthase subunit alpha - Rhodococcus
           sp. (strain RHA1)
          Length = 547

 Score = 96.7 bits (230), Expect = 5e-19
 Identities = 43/76 (56%), Positives = 60/76 (78%)
 Frame = +1

Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690
           +A  ++ R  V EP+QTGIKA+D++ PIGRGQR+L+IGDR+TGKTA+ ID I+NQ+   +
Sbjct: 135 QAASVLERQPVEEPLQTGIKAIDAMTPIGRGQRQLVIGDRKTGKTAVCIDAILNQKANWE 194

Query: 691 GEDEKKKLYCIYVVIG 738
             DEK+++ CIYV IG
Sbjct: 195 TGDEKQQVRCIYVAIG 210



 Score = 85.0 bits (201), Expect = 2e-15
 Identities = 39/89 (43%), Positives = 58/89 (65%)
 Frame = +2

Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427
           L    A E++EF  G+ G+ALNL+   +G V+ G+ + I+EG  VKRTG ++ VPVG+  
Sbjct: 47  LPSAMANELLEFPGGILGVALNLDATEIGAVILGDYENIQEGQEVKRTGDVLSVPVGDAF 106

Query: 428 LGRVVDALGNPIDGKGPIDTKSRMRVGLR 514
           LGRV++ LG PIDG G I++     + L+
Sbjct: 107 LGRVINPLGQPIDGLGEIESNETRALELQ 135


>UniRef50_O50140 Cluster: ATP synthase subunit alpha; n=2;
           Firmicutes|Rep: ATP synthase subunit alpha -
           Ruminococcus albus
          Length = 523

 Score = 95.9 bits (228), Expect = 9e-19
 Identities = 48/80 (60%), Positives = 59/80 (73%)
 Frame = +2

Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427
           LE   + E++EF +G  GMA+NLE D VG V+ G ++ I+EG  VKRTG IV VPVGE +
Sbjct: 44  LEKCMSGELLEFENGTYGMAMNLEQDFVGCVLLGTEEGIREGSNVKRTGRIVSVPVGEAM 103

Query: 428 LGRVVDALGNPIDGKGPIDT 487
           LGRVV+ALG PIDGKG I T
Sbjct: 104 LGRVVNALGAPIDGKGAILT 123



 Score = 94.7 bits (225), Expect = 2e-18
 Identities = 48/72 (66%), Positives = 56/72 (77%)
 Frame = +1

Query: 523 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDE 702
           II R SV  P+QTGIKA+DS++P+GRGQRELIIGDRQTGKT +A+DTIINQ    KG   
Sbjct: 136 IITRKSVNRPLQTGIKAIDSMIPVGRGQRELIIGDRQTGKTTIALDTIINQ----KG--- 188

Query: 703 KKKLYCIYVVIG 738
            K + CIYV IG
Sbjct: 189 -KNVICIYVAIG 199


>UniRef50_A6PZL5 Cluster: ATP synthase subunit alpha; n=4;
           Leuconostocaceae|Rep: ATP synthase subunit alpha -
           Leuconostoc durionis
          Length = 297

 Score = 92.7 bits (220), Expect = 9e-18
 Identities = 47/76 (61%), Positives = 60/76 (78%)
 Frame = +1

Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690
           KAP ++ R SV EP+QTGIKA+D+LVPIGRGQRELIIGDR+TGKT++A+DTI+NQ    K
Sbjct: 95  KAPGVMARKSVSEPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSIAVDTILNQ----K 150

Query: 691 GEDEKKKLYCIYVVIG 738
            +D    +  IYV +G
Sbjct: 151 DQD----MIVIYVAVG 162



 Score = 92.3 bits (219), Expect = 1e-17
 Identities = 40/73 (54%), Positives = 57/73 (78%)
 Frame = +2

Query: 269 EMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDA 448
           E+V F++G  GM  NLE   VG++V G+ + I+EGD VKRTG +++VPVGE+++GRVV+A
Sbjct: 14  ELVTFNNGAYGMVQNLEESEVGIIVLGSSEGIREGDTVKRTGHVMEVPVGEELIGRVVNA 73

Query: 449 LGNPIDGKGPIDT 487
           LG PIDG G ++T
Sbjct: 74  LGQPIDGLGDLNT 86


>UniRef50_Q9PR12 Cluster: ATP synthase subunit alpha; n=1037;
           cellular organisms|Rep: ATP synthase subunit alpha -
           Ureaplasma parvum (Ureaplasma urealyticum biotype 1)
          Length = 799

 Score = 92.3 bits (219), Expect = 1e-17
 Identities = 45/78 (57%), Positives = 58/78 (74%)
 Frame = +2

Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427
           L+++   E+V F +G++GMALNLE D VGVV+ G+   IKEGD V RT  IV+VPVG+ +
Sbjct: 45  LDNVMLNEIVRFENGVEGMALNLEEDAVGVVLLGDYSNIKEGDRVYRTKRIVEVPVGDVM 104

Query: 428 LGRVVDALGNPIDGKGPI 481
           LGRVVDALG  +D KG I
Sbjct: 105 LGRVVDALGKAVDNKGNI 122



 Score = 84.6 bits (200), Expect = 2e-15
 Identities = 42/75 (56%), Positives = 56/75 (74%)
 Frame = +1

Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 693
           AP ++ R SV +P++TGI ++D++ PIG+GQRELIIGDRQTGKT +AID IINQ    KG
Sbjct: 134 APGVMDRKSVHQPLETGILSIDAMFPIGKGQRELIIGDRQTGKTTIAIDAIINQ----KG 189

Query: 694 EDEKKKLYCIYVVIG 738
               + + C+YV IG
Sbjct: 190 ----RNVNCVYVAIG 200


>UniRef50_Q9AHX2 Cluster: ATP synthase alpha subunit; n=10;
           Candidatus Carsonella ruddii|Rep: ATP synthase alpha
           subunit - Carsonella ruddii
          Length = 481

 Score = 90.2 bits (214), Expect = 5e-17
 Identities = 43/75 (57%), Positives = 56/75 (74%)
 Frame = +1

Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 693
           AP ++ R +V EP+ TGIK++DS++PIG+GQRELIIGDRQTGKT + IDTIINQ      
Sbjct: 109 APGVMDRETVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTICIDTIINQ------ 162

Query: 694 EDEKKKLYCIYVVIG 738
             + K + C+YV IG
Sbjct: 163 --KNKNIICVYVCIG 175



 Score = 57.2 bits (132), Expect = 4e-07
 Identities = 24/75 (32%), Positives = 46/75 (61%)
 Frame = +2

Query: 242 LWLEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGE 421
           L L++ +  EM+ FS  +KG+  +L   NV +++  N   + +G+    T  I +VPVG+
Sbjct: 18  LGLKNAKYGEMILFSKNIKGIVFSLNKKNVNIIILNNYNELTQGEKCYCTNKIFEVPVGK 77

Query: 422 QILGRVVDALGNPID 466
           Q++GR++++ G  +D
Sbjct: 78  QLIGRIINSRGETLD 92


>UniRef50_Q21Z99 Cluster: ATP synthase subunit alpha 2; n=22;
           cellular organisms|Rep: ATP synthase subunit alpha 2 -
           Rhodoferax ferrireducens (strain DSM 15236 / ATCC
           BAA-621 / T118)
          Length = 534

 Score = 89.8 bits (213), Expect = 6e-17
 Identities = 49/98 (50%), Positives = 66/98 (67%), Gaps = 2/98 (2%)
 Frame = +1

Query: 451 GKPY*WQG--TNRHEIPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIG 624
           G+P   +G   + H +P E R  +PI+  R  V  P+QTG+K +D+L+P+GRGQRELI+G
Sbjct: 118 GRPLDGRGPVASSHRLPIE-RPASPIM-DRAPVTVPLQTGLKVIDALIPVGRGQRELILG 175

Query: 625 DRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVVIG 738
           DRQTGKTA+AIDTI+NQQ  N        + C+Y  IG
Sbjct: 176 DRQTGKTAIAIDTILNQQGQN--------VLCVYCAIG 205



 Score = 79.0 bits (186), Expect = 1e-13
 Identities = 35/86 (40%), Positives = 56/86 (65%)
 Frame = +2

Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427
           L  +  +E+V+F   L G+A N++   +GVV+ G    +  GD V RTG ++DV VG+ +
Sbjct: 50  LPGVGFDELVKFPGDLFGIAFNVDEAEIGVVLLGEYWHLHAGDEVDRTGRVMDVAVGDGL 109

Query: 428 LGRVVDALGNPIDGKGPIDTKSRMRV 505
           LGRV+D LG P+DG+GP+ +  R+ +
Sbjct: 110 LGRVIDPLGRPLDGRGPVASSHRLPI 135


>UniRef50_Q4QJF1 Cluster: ATPase alpha subunit; n=9;
           Trypanosomatidae|Rep: ATPase alpha subunit - Leishmania
           major
          Length = 574

 Score = 87.8 bits (208), Expect = 2e-16
 Identities = 43/75 (57%), Positives = 54/75 (72%)
 Frame = +1

Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 693
           AP I+ R  V   + TG KAVD+++PIGRGQRELI+GDRQTGKT++A+ TIINQ R N+ 
Sbjct: 160 APNIVSRSPVNYNLLTGFKAVDTMIPIGRGQRELIVGDRQTGKTSIAVSTIINQVRSNQQ 219

Query: 694 EDEKKKLYCIYVVIG 738
              K  +  IYV IG
Sbjct: 220 ILSKNAVISIYVSIG 234



 Score = 45.6 bits (103), Expect = 0.001
 Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
 Frame = +2

Query: 299 GMALNLEPDN-VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPI 463
           G+  NLE D  +G+++  N   ++ G  V  TG ++ +PVG  +LG+VV+ LG+ +
Sbjct: 80  GLVFNLEKDGRIGIILMDNITEVQSGQKVMATGKLLYIPVGAGVLGKVVNPLGHEV 135


>UniRef50_A3JAC3 Cluster: F0F1 ATP synthase subunit alpha; n=3;
           Proteobacteria|Rep: F0F1 ATP synthase subunit alpha -
           Marinobacter sp. ELB17
          Length = 549

 Score = 81.4 bits (192), Expect = 2e-14
 Identities = 39/76 (51%), Positives = 55/76 (72%)
 Frame = +1

Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690
           +AP ++ R ++ +P+ TGIKA+D+ VP+G GQRELIIGDRQTGKT++A+DT++NQ R   
Sbjct: 168 EAPGVLSRSAIFKPLATGIKAIDAAVPVGLGQRELIIGDRQTGKTSIAVDTMLNQIR--- 224

Query: 691 GEDEKKKLYCIYVVIG 738
                  + CIY  IG
Sbjct: 225 -----SDVICIYCAIG 235



 Score = 77.4 bits (182), Expect = 3e-13
 Identities = 35/73 (47%), Positives = 54/73 (73%)
 Frame = +2

Query: 263 AEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVV 442
           A+E++ F+SG++G+ L+LEP  +GV++ G  + I+ G+ V+RT  ++ VPVG  +LGRVV
Sbjct: 85  ADELLIFASGVRGIVLDLEPGRLGVILLGPSEHIRLGEDVRRTRKVISVPVGPALLGRVV 144

Query: 443 DALGNPIDGKGPI 481
           DA+G P DG G I
Sbjct: 145 DAVGLPRDGLGVI 157


>UniRef50_Q9BBC2 Cluster: ATPase CF1 alpha subunit; n=4;
           Dinophyceae|Rep: ATPase CF1 alpha subunit - Amphidinium
           carterae (Dinoflagellate)
          Length = 464

 Score = 81.4 bits (192), Expect = 2e-14
 Identities = 35/53 (66%), Positives = 46/53 (86%)
 Frame = +1

Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIIN 672
           AP I+ R SV EP+ TGI ++D+++PIGRGQRELIIGDRQTGKT++ +DTI+N
Sbjct: 108 APSIVSRQSVCEPLATGIVSIDAMIPIGRGQRELIIGDRQTGKTSICLDTIVN 160


>UniRef50_Q62EB0 Cluster: ATP synthase subunit alpha 2; n=25;
           Proteobacteria|Rep: ATP synthase subunit alpha 2 -
           Burkholderia mallei (Pseudomonas mallei)
          Length = 670

 Score = 81.4 bits (192), Expect = 2e-14
 Identities = 45/85 (52%), Positives = 54/85 (63%)
 Frame = +1

Query: 484 HEIPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDT 663
           H +P E    AP II R  V EP+ TG+  VD+L  IGRGQRELIIGDR TGKT+LAID 
Sbjct: 136 HTLPIERA--APAIIERDLVSEPLDTGVLIVDALFTIGRGQRELIIGDRATGKTSLAIDA 193

Query: 664 IINQQRFNKGEDEKKKLYCIYVVIG 738
           I+NQ+           + C+YV IG
Sbjct: 194 IVNQRH--------SDVICVYVAIG 210



 Score = 77.0 bits (181), Expect = 5e-13
 Identities = 35/79 (44%), Positives = 49/79 (62%)
 Frame = +2

Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427
           LED    E++ F  G+ G A  L+ D + VV+   D  ++    V RTGA+++VP G Q+
Sbjct: 55  LEDTMLNEVLRFEGGVTGFAHTLDEDLISVVLLDPDAGVRAQTAVARTGAVLEVPAGPQL 114

Query: 428 LGRVVDALGNPIDGKGPID 484
           LGRVVD LG P+DG  P+D
Sbjct: 115 LGRVVDPLGRPLDGGAPLD 133


>UniRef50_Q9TAH9 Cluster: ATP synthase subunit alpha; n=1; Cafeteria
           roenbergensis|Rep: ATP synthase subunit alpha -
           Cafeteria roenbergensis
          Length = 601

 Score = 80.6 bits (190), Expect = 4e-14
 Identities = 39/60 (65%), Positives = 47/60 (78%)
 Frame = +1

Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690
           +AP II R SV +P+ TG+  VDS+VPIG GQRELIIGDRQ GKTA+AID I+NQ   N+
Sbjct: 189 QAPGIIVRKSVNKPLLTGLNCVDSMVPIGLGQRELIIGDRQVGKTAVAIDMILNQAFLNE 248



 Score = 60.1 bits (139), Expect = 6e-08
 Identities = 25/58 (43%), Positives = 41/58 (70%)
 Frame = +2

Query: 293 LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 466
           ++GM + +E D + V++FG+++ +K GD V+  G IV + VG  +LGRV+D LGN +D
Sbjct: 96  VEGMVVGIEQDYISVIIFGDERFVKVGDRVRPRGNIVAINVGIGLLGRVIDPLGNVLD 153


>UniRef50_Q92FH0 Cluster: ATP synthase subunit alpha 1; n=13;
           Listeria|Rep: ATP synthase subunit alpha 1 - Listeria
           innocua
          Length = 498

 Score = 78.2 bits (184), Expect = 2e-13
 Identities = 38/74 (51%), Positives = 51/74 (68%)
 Frame = +1

Query: 517 PIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGE 696
           P I+   SV  P+ TG+  +DS+ PIGRGQR+LI+G+RQ+GKT +A+DTIINQ   N   
Sbjct: 129 PAIMTIDSVTRPLNTGLAVIDSITPIGRGQRQLILGNRQSGKTQIAVDTIINQHNQN--- 185

Query: 697 DEKKKLYCIYVVIG 738
                ++CIYV IG
Sbjct: 186 -----VHCIYVAIG 194



 Score = 33.9 bits (74), Expect = 4.2
 Identities = 19/69 (27%), Positives = 32/69 (46%)
 Frame = +2

Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427
           LE+    + V      +G+ L L  + VG+ +      I EG  V  T   ++V + E +
Sbjct: 39  LENAALHQAVTIDGRHRGVILELNEEFVGIGLIDKTNDILEGMSVSVTDHFIEVNLFEDM 98

Query: 428 LGRVVDALG 454
            GR++D  G
Sbjct: 99  AGRIIDTTG 107


>UniRef50_Q1PVR1 Cluster: Strongly similar to ATPA gene encoding
           subunit alpha of ATP synthase; n=1; Candidatus Kuenenia
           stuttgartiensis|Rep: Strongly similar to ATPA gene
           encoding subunit alpha of ATP synthase - Candidatus
           Kuenenia stuttgartiensis
          Length = 498

 Score = 76.6 bits (180), Expect = 6e-13
 Identities = 38/75 (50%), Positives = 53/75 (70%)
 Frame = +1

Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 693
           AP ++ R  + EP+ TGIK +DS++ IG+GQRELIIGD  TGK+++AIDT+INQ      
Sbjct: 133 APSLLQRDFITEPLYTGIKVIDSMLAIGKGQRELIIGDPSTGKSSIAIDTVINQ------ 186

Query: 694 EDEKKKLYCIYVVIG 738
             +  ++  IYVVIG
Sbjct: 187 --KNSRVISIYVVIG 199



 Score = 57.6 bits (133), Expect = 3e-07
 Identities = 31/77 (40%), Positives = 45/77 (58%)
 Frame = +2

Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427
           L D +  E++ F SG +G++ +L  D++ VV+      I+ GD   +T  I  V   E +
Sbjct: 44  LRDAKLYELILFESGDEGISFDLGVDSIAVVLLTGRNGIRAGDTAYKTDRIASVNATEGL 103

Query: 428 LGRVVDALGNPIDGKGP 478
           LGRV+ ALGNPID  GP
Sbjct: 104 LGRVLGALGNPID-NGP 119


>UniRef50_Q6KHZ3 Cluster: ATP synthase alpha chain; n=1; Mycoplasma
           mobile|Rep: ATP synthase alpha chain - Mycoplasma mobile
          Length = 516

 Score = 75.8 bits (178), Expect = 1e-12
 Identities = 32/52 (61%), Positives = 46/52 (88%)
 Frame = +1

Query: 532 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFN 687
           R S+ EP+QTGI ++D L+P+G+GQRELIIGDR+TGKT++A++TII+Q+  N
Sbjct: 120 RKSLNEPVQTGIASIDMLIPLGKGQRELIIGDRRTGKTSVALNTIISQKNTN 171


>UniRef50_Q603U2 Cluster: ATP synthase subunit alpha 2; n=6;
           Proteobacteria|Rep: ATP synthase subunit alpha 2 -
           Methylococcus capsulatus
          Length = 503

 Score = 75.8 bits (178), Expect = 1e-12
 Identities = 38/75 (50%), Positives = 56/75 (74%)
 Frame = +1

Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 693
           +P II R  V++P+ TG + VD+LVPIG+GQR+LIIGD  TG+++LAID ++NQ    KG
Sbjct: 142 SPPIIARDFVQQPLYTGTRLVDTLVPIGKGQRQLIIGDEGTGRSSLAIDAVLNQ----KG 197

Query: 694 EDEKKKLYCIYVVIG 738
               +++ C+YV+IG
Sbjct: 198 ----REVRCVYVLIG 208



 Score = 61.7 bits (143), Expect = 2e-08
 Identities = 26/77 (33%), Positives = 45/77 (58%)
 Frame = +2

Query: 266 EEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVD 445
           ++++ F  G   +   L    +G V+    + +  G   +  G  +DVPVGE +LGRV+D
Sbjct: 59  DDVLMFEDGSWAVVFALTKKRIGAVLLHQSENLTAGTPARLAGRTLDVPVGETLLGRVID 118

Query: 446 ALGNPIDGKGPIDTKSR 496
            +GNP+DG  P++T++R
Sbjct: 119 PIGNPLDGGRPLETRNR 135


>UniRef50_Q9G8S6 Cluster: ATP synthase F1 subunit alpha; n=1;
           Naegleria gruberi|Rep: ATP synthase F1 subunit alpha -
           Naegleria gruberi
          Length = 550

 Score = 73.3 bits (172), Expect = 6e-12
 Identities = 35/58 (60%), Positives = 42/58 (72%)
 Frame = +1

Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFN 687
           AP II R  VR P  TGI  VD L+P+G GQRELIIGD+ TGKT+LAI  ++NQ+  N
Sbjct: 130 APGIIEREPVRVPFLTGINVVDCLIPVGCGQRELIIGDQNTGKTSLAISAVLNQRLVN 187



 Score = 44.8 bits (101), Expect = 0.002
 Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
 Frame = +2

Query: 248 LEDIQAEEMVEFSS---GLKGMALNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPV 415
           LE++   E+V+F S    L G  LNLE   V +V+  G    +K  D+V RT   V    
Sbjct: 28  LENVFVGEVVKFKSQESNLLGQVLNLEKSQVRIVMINGQQSHLKSNDLVYRTYKDVKTKA 87

Query: 416 GEQILGRVVDALG 454
           G  +LGRVV  LG
Sbjct: 88  GYGVLGRVVSPLG 100


>UniRef50_UPI0000EB1FE1 Cluster: UPI0000EB1FE1 related cluster; n=1;
           Canis lupus familiaris|Rep: UPI0000EB1FE1 UniRef100
           entry - Canis familiaris
          Length = 383

 Score = 71.3 bits (167), Expect = 2e-11
 Identities = 43/73 (58%), Positives = 52/73 (71%)
 Frame = +2

Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427
           L + QAEEMV FSS LK M LNLE D +  VV   +   KEGD VKRTGAI+DV VG+++
Sbjct: 87  LRNAQAEEMVGFSS-LKCMCLNLEADML--VVLHLEMNTKEGDTVKRTGAIMDVLVGKKL 143

Query: 428 LGRVVDALGNPID 466
           LGRVV A+G+  D
Sbjct: 144 LGRVVGAIGDSKD 156



 Score = 54.8 bits (126), Expect = 2e-06
 Identities = 34/73 (46%), Positives = 43/73 (58%)
 Frame = +1

Query: 520 IIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGED 699
           I +P +SV+EPM+TGIKAVDSLVPIG GQ E+                      F+ G D
Sbjct: 167 ITLP-ISVQEPMETGIKAVDSLVPIGPGQHEIC---------------------FSDGSD 204

Query: 700 EKKKLYCIYVVIG 738
           E+KKLY IY+ +G
Sbjct: 205 ERKKLYYIYIAVG 217



 Score = 50.8 bits (116), Expect = 3e-05
 Identities = 24/43 (55%), Positives = 32/43 (74%)
 Frame = +3

Query: 135 AEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKTSR 263
           A +S++ EE ILGA   ADLE+TG VLS GDGI R+ GL+ ++
Sbjct: 49  AGVSSVSEECILGANTSADLEDTGCVLSFGDGIVRISGLRNAQ 91


>UniRef50_A5IY82 Cluster: ATP synthase alpha chain; n=6;
           Mycoplasmataceae|Rep: ATP synthase alpha chain -
           Mycoplasma agalactiae
          Length = 524

 Score = 71.3 bits (167), Expect = 2e-11
 Identities = 37/66 (56%), Positives = 45/66 (68%)
 Frame = +1

Query: 541 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYC 720
           + E + TGI A+D L+PIG+GQRELIIGDRQTGKT +A++ IINQ          K   C
Sbjct: 140 LNEQLYTGINAIDLLIPIGKGQRELIIGDRQTGKTHIALNAIINQ--------AAKGTKC 191

Query: 721 IYVVIG 738
           IYV IG
Sbjct: 192 IYVAIG 197


>UniRef50_Q98QX5 Cluster: ATP SYNTHASE ALPHA CHAIN; n=2;
           Mycoplasma|Rep: ATP SYNTHASE ALPHA CHAIN - Mycoplasma
           pulmonis
          Length = 529

 Score = 69.7 bits (163), Expect = 7e-11
 Identities = 30/59 (50%), Positives = 47/59 (79%)
 Frame = +1

Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFN 687
           +A  I  R +V  P++TGI A+D+++PIGRGQ++LIIGD+ TGKTA+A++ I+ Q++ N
Sbjct: 112 EAKPIYSRKAVNAPLETGITAIDAVLPIGRGQKQLIIGDKGTGKTAIALNAILAQEKSN 170


>UniRef50_Q4A6P2 Cluster: ATP synthase alpha chain; n=2; Mycoplasma
           synoviae 53|Rep: ATP synthase alpha chain - Mycoplasma
           synoviae (strain 53)
          Length = 514

 Score = 69.7 bits (163), Expect = 7e-11
 Identities = 37/66 (56%), Positives = 49/66 (74%)
 Frame = +1

Query: 541 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYC 720
           +++ + TG   VD L+PIGRGQR+LIIGDR+TGKT LA++TIINQ+  N+G      + C
Sbjct: 128 LKKQLLTGYVVVDLLIPIGRGQRQLIIGDRKTGKTFLALNTIINQK--NQG------VKC 179

Query: 721 IYVVIG 738
           IYV IG
Sbjct: 180 IYVAIG 185


>UniRef50_Q98QB7 Cluster: ATP synthase subunit alpha 2; n=1;
           Mycoplasma pulmonis|Rep: ATP synthase subunit alpha 2 -
           Mycoplasma pulmonis
          Length = 513

 Score = 69.3 bits (162), Expect = 9e-11
 Identities = 28/49 (57%), Positives = 43/49 (87%)
 Frame = +1

Query: 532 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQ 678
           RV + EP++TGI ++D L+PIG+GQR+LI+GD +TGKT++A+ T+INQ+
Sbjct: 122 RVKLNEPLETGIFSIDILLPIGKGQRQLILGDSKTGKTSIALSTMINQK 170


>UniRef50_Q98PM2 Cluster: ATP SYNTHASE ALPHA CHAIN; n=1; Mycoplasma
           pulmonis|Rep: ATP SYNTHASE ALPHA CHAIN - Mycoplasma
           pulmonis
          Length = 509

 Score = 68.9 bits (161), Expect = 1e-10
 Identities = 38/78 (48%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
 Frame = +1

Query: 508 FKAPI-IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRF 684
           F  P+ ++ R  + E + TGI ++D   PIGRGQRE+I+GD+QTGKT +A++TIINQ+  
Sbjct: 114 FFQPVGMLERQHLSEQLYTGILSIDLFNPIGRGQREIIVGDKQTGKTHIALNTIINQR-- 171

Query: 685 NKGEDEKKKLYCIYVVIG 738
           N G      + CIYV IG
Sbjct: 172 NSG------VKCIYVSIG 183


>UniRef50_Q9XXK1-2 Cluster: Isoform b of Q9XXK1 ; n=1;
           Caenorhabditis elegans|Rep: Isoform b of Q9XXK1 -
           Caenorhabditis elegans
          Length = 146

 Score = 67.7 bits (158), Expect = 3e-10
 Identities = 30/38 (78%), Positives = 36/38 (94%)
 Frame = +2

Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKL 361
           L++IQAEEMVEF SG+KGMA+NL+ DNVGVVVFGNDK+
Sbjct: 72  LKNIQAEEMVEFDSGIKGMAMNLDVDNVGVVVFGNDKI 109



 Score = 62.5 bits (145), Expect = 1e-08
 Identities = 30/40 (75%), Positives = 34/40 (85%)
 Frame = +3

Query: 135 AEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLK 254
           +E+S ILEERILG     +LEETG+VLSIGDGIARVYGLK
Sbjct: 34  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLK 73


>UniRef50_Q600H8 Cluster: ATP synthase alpha chain; n=3; Mycoplasma
           hyopneumoniae|Rep: ATP synthase alpha chain - Mycoplasma
           hyopneumoniae (strain 232)
          Length = 512

 Score = 65.7 bits (153), Expect = 1e-09
 Identities = 35/72 (48%), Positives = 46/72 (63%)
 Frame = +1

Query: 523 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDE 702
           ++ R  +   + TGI A+D   PIG GQRELI+GDRQTGKT + I+TIINQ+       +
Sbjct: 115 VLRRELIDRQIYTGIYAIDLFNPIGFGQRELIVGDRQTGKTHIGINTIINQK-------D 167

Query: 703 KKKLYCIYVVIG 738
            +   CIYV IG
Sbjct: 168 SRTTKCIYVSIG 179


>UniRef50_Q2F981 Cluster: Ribosomal protein S2; n=3; Oryza
           sativa|Rep: Ribosomal protein S2 - Oryza sativa subsp.
           indica (Rice)
          Length = 483

 Score = 64.1 bits (149), Expect = 3e-09
 Identities = 30/38 (78%), Positives = 34/38 (89%)
 Frame = +1

Query: 523 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQT 636
           I+ R SV EPMQTG+KAVDSLVPIGRG+RELIIG R+T
Sbjct: 265 ILERKSVHEPMQTGLKAVDSLVPIGRGRRELIIGGRKT 302


>UniRef50_A0VM48 Cluster: Putative uncharacterized protein; n=3;
           Alphaproteobacteria|Rep: Putative uncharacterized
           protein - Dinoroseobacter shibae DFL 12
          Length = 950

 Score = 62.5 bits (145), Expect = 1e-08
 Identities = 29/80 (36%), Positives = 50/80 (62%)
 Frame = -3

Query: 484 VDWSLAINRVSQSVYYTPKDLLSDGNVYDSTSTLDNISFFDKLVITKYYHTHIVRFQVKG 305
           +D +LA+ RV+Q+++   +  ++ G+V+D    LD+++F D  V  + + THIV F+V+G
Sbjct: 697 LDRALAVQRVAQAIHDPAQQRVAHGHVHDGLGALDDVAFLDVPVRAEDHDTHIVDFEVQG 756

Query: 304 HSLEA*GELHHLLSLDVFKP 245
           H  +A  EL H   L V +P
Sbjct: 757 HPADAARELDHFTGLHVVQP 776


>UniRef50_A7DHD0 Cluster: Putative uncharacterized protein; n=2;
           Methylobacterium extorquens PA1|Rep: Putative
           uncharacterized protein - Methylobacterium extorquens
           PA1
          Length = 680

 Score = 56.4 bits (130), Expect = 7e-07
 Identities = 30/84 (35%), Positives = 50/84 (59%)
 Frame = -3

Query: 505 DPHTGFRVDWSLAINRVSQSVYYTPKDLLSDGNVYDSTSTLDNISFFDKLVITKYYHTHI 326
           D  T  R+D +LA++RV+++V +  +  L+D +V+D    LD ++F +  V  + +   I
Sbjct: 443 DAATLGRLDRALAVDRVAEAVDHAAEQTLADRHVHDGAGPLDGLAFLNLTVGAEDHDADI 502

Query: 325 VRFQVKGHSLEA*GELHHLLSLDV 254
           V  +V+GH+  A  EL HL  LDV
Sbjct: 503 VLLEVEGHAAHARLELDHLTGLDV 526


>UniRef50_A3L181 Cluster: ATP synthase beta chain; n=3;
           Gammaproteobacteria|Rep: ATP synthase beta chain -
           Pseudomonas aeruginosa C3719
          Length = 154

 Score = 55.2 bits (127), Expect = 2e-06
 Identities = 25/53 (47%), Positives = 34/53 (64%)
 Frame = +2

Query: 338 VVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSR 496
           +  G+ + +K G  V  TGA + VPVG+  LGR++D LGNPID  GPI  + R
Sbjct: 53  IAMGSTEGLKRGLNVDSTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEER 105


>UniRef50_Q8R9Z1 Cluster: Flagellar biosynthesis/type III secretory
           pathway ATPase; n=10; Bacteria|Rep: Flagellar
           biosynthesis/type III secretory pathway ATPase -
           Thermoanaerobacter tengcongensis
          Length = 437

 Score = 53.6 bits (123), Expect = 5e-06
 Identities = 26/58 (44%), Positives = 37/58 (63%)
 Frame = +2

Query: 308 LNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 481
           +  + + V ++  GN + I  G  V  TG  + V VG+ +LGRV+D LGNPIDGKGP+
Sbjct: 61  VGFKEEKVYLMPLGNMEGIGPGSKVIATGQTLKVNVGKSLLGRVLDGLGNPIDGKGPL 118



 Score = 38.7 bits (86), Expect = 0.15
 Identities = 23/67 (34%), Positives = 32/67 (47%)
 Frame = +1

Query: 451 GKPY*WQGTNRHEIPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDR 630
           G P   +G  ++E         P  + R  +RE M  GIKA+D L+  G+GQR  I    
Sbjct: 109 GNPIDGKGPLKYEKSIPVNNTPPDPLERKRIREVMPLGIKAIDGLLTCGKGQRIGIFAGS 168

Query: 631 QTGKTAL 651
             GK+ L
Sbjct: 169 GVGKSTL 175


>UniRef50_A0NUS5 Cluster: Putative uncharacterized protein; n=1;
           Stappia aggregata IAM 12614|Rep: Putative
           uncharacterized protein - Stappia aggregata IAM 12614
          Length = 577

 Score = 53.6 bits (123), Expect = 5e-06
 Identities = 26/77 (33%), Positives = 46/77 (59%)
 Frame = -3

Query: 484 VDWSLAINRVSQSVYYTPKDLLSDGNVYDSTSTLDNISFFDKLVITKYYHTHIVRFQVKG 305
           +D + A++RV++ V    +  L+D + +D    LD ++FF+  V  +   T++V FQV+G
Sbjct: 284 LDRAFAVDRVAERVDDAAQKALADWHFHDGAGPLDGVAFFNVTVGAEDNDTNVVGFQVQG 343

Query: 304 HSLEA*GELHHLLSLDV 254
           H+L+   E  H  SLD+
Sbjct: 344 HALDTTREFDHFTSLDL 360


>UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondrial
           precursor; n=14; cellular organisms|Rep: ATP synthase
           subunit beta, mitochondrial precursor - Saccharomyces
           cerevisiae (Baker's yeast)
          Length = 511

 Score = 50.8 bits (116), Expect = 3e-05
 Identities = 23/65 (35%), Positives = 38/65 (58%)
 Frame = +2

Query: 302 MALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 481
           +A +L  + V  +     + +  G+ V  TG  + VPVG + LGR+++ +G PID +GPI
Sbjct: 83  VAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPI 142

Query: 482 DTKSR 496
            +K R
Sbjct: 143 KSKLR 147



 Score = 33.5 bits (73), Expect = 5.5
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +1

Query: 547 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 693
           E ++TGIK VD L P  RG +  + G    GKT    + I N  + + G
Sbjct: 165 EILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGG 213


>UniRef50_Q01D41 Cluster: ATP synthase alpha chain, sodium ion
           specific; n=2; Ostreococcus|Rep: ATP synthase alpha
           chain, sodium ion specific - Ostreococcus tauri
          Length = 625

 Score = 50.0 bits (114), Expect = 6e-05
 Identities = 27/74 (36%), Positives = 40/74 (54%)
 Frame = +1

Query: 517 PIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGE 696
           P +  R  +  P+ TG+KAVD L P+GRGQ  L+ G+  TG + L + TI  Q       
Sbjct: 185 PTVEDRKPITTPLVTGVKAVDVLAPLGRGQCMLVSGEPGTGLSELCLTTIAAQ------- 237

Query: 697 DEKKKLYCIYVVIG 738
            +K  + C+Y  +G
Sbjct: 238 -KKTGVRCVYAALG 250


>UniRef50_Q93UD9 Cluster: ATP synthase beta subunit; n=12;
           Candidatus Carsonella ruddii|Rep: ATP synthase beta
           subunit - Carsonella ruddii
          Length = 139

 Score = 49.6 bits (113), Expect = 8e-05
 Identities = 24/59 (40%), Positives = 36/59 (61%)
 Frame = +2

Query: 329 VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRV 505
           V V+ FG+   +K   IV  TG  +  PVG+  LGR+++ LGNPID KG I +  ++ +
Sbjct: 49  VRVIAFGDTNGLKRNMIVLDTGKPILTPVGDCTLGRILNILGNPIDNKGNIFSSKKVPI 107


>UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellular
           organisms|Rep: ATP synthase subunit beta - Rhizobium
           meliloti (Sinorhizobium meliloti)
          Length = 504

 Score = 48.8 bits (111), Expect = 1e-04
 Identities = 21/68 (30%), Positives = 40/68 (58%)
 Frame = +2

Query: 302 MALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 481
           +A +L  ++V  +   + + +  G  V  TG  + VPVG++ LGR+++ +G P+D  GP+
Sbjct: 75  VAQHLGENSVRTIAMDSTEGLVRGQKVADTGGPIAVPVGKETLGRIMNVIGEPVDEAGPL 134

Query: 482 DTKSRMRV 505
            T +R  +
Sbjct: 135 KTSARRAI 142



 Score = 36.7 bits (81), Expect = 0.59
 Identities = 19/61 (31%), Positives = 32/61 (52%)
 Frame = +1

Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690
           +AP  + + +  + + TGIK VD L P  +G +  + G    GKT L ++ I N  + + 
Sbjct: 145 EAPAYVDQSTEAQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHG 204

Query: 691 G 693
           G
Sbjct: 205 G 205


>UniRef50_Q67K17 Cluster: Flagellar-specific ATP synthase; n=1;
           Symbiobacterium thermophilum|Rep: Flagellar-specific ATP
           synthase - Symbiobacterium thermophilum
          Length = 436

 Score = 48.0 bits (109), Expect = 2e-04
 Identities = 23/53 (43%), Positives = 32/53 (60%)
 Frame = +2

Query: 323 DNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 481
           D + ++  G    ++ G  V  TG  +  PVG  +LGRV+D LGNPID KGP+
Sbjct: 62  DRLLLMPLGETDGLRPGWDVIATGGPLQAPVGMGLLGRVIDGLGNPIDDKGPL 114



 Score = 36.7 bits (81), Expect = 0.59
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = +1

Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           AP  + R  +  P+  G++A+D+L+ +G GQR  I      GK+ L
Sbjct: 126 APDPLARQRIHRPLSLGVRALDALITVGMGQRIGIFAGSGVGKSTL 171


>UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondrial
           precursor; n=3027; cellular organisms|Rep: ATP synthase
           subunit beta, mitochondrial precursor - Homo sapiens
           (Human)
          Length = 529

 Score = 48.0 bits (109), Expect = 2e-04
 Identities = 21/52 (40%), Positives = 35/52 (67%)
 Frame = +2

Query: 335 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTK 490
           + + G + L++ G  V  +GA + +PVG + LGR+++ +G PID +GPI TK
Sbjct: 111 IAMDGTEGLVR-GQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTK 161



 Score = 35.5 bits (78), Expect = 1.4
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = +1

Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690
           +AP  +     +E + TGIK VD L P  +G +  + G    GKT L ++ I N  + + 
Sbjct: 169 EAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHG 228

Query: 691 G 693
           G
Sbjct: 229 G 229


>UniRef50_P38168 Cluster: Putative uncharacterized protein YBL100C;
           n=1; Saccharomyces cerevisiae|Rep: Putative
           uncharacterized protein YBL100C - Saccharomyces
           cerevisiae (Baker's yeast)
          Length = 104

 Score = 47.2 bits (107), Expect = 4e-04
 Identities = 25/47 (53%), Positives = 30/47 (63%)
 Frame = -3

Query: 256 VFKP*TRAIPSPMLKTRPVSSRSALGAAPRILSSRMVEISAALWVVE 116
           +FKP TRAIPSP  +T PVS + A    P ILSS+M E S    +VE
Sbjct: 2   LFKPKTRAIPSPTARTLPVSFKLASSDTPLILSSKMEETSVGCALVE 48


>UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellular
           organisms|Rep: ATP synthase subunit beta - Zymomonas
           mobilis
          Length = 484

 Score = 47.2 bits (107), Expect = 4e-04
 Identities = 20/51 (39%), Positives = 35/51 (68%)
 Frame = +2

Query: 353 DKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRV 505
           D L++  ++V  TG+ + VPVG + LGR+++ +G P+D +GPI +K  M +
Sbjct: 67  DGLVRGQEVVD-TGSEIRVPVGPETLGRIMNVVGRPVDERGPIGSKQTMPI 116


>UniRef50_Q6BRW4 Cluster: Debaryomyces hansenii chromosome D of
           strain CBS767 of Debaryomyces hansenii; n=1;
           Debaryomyces hansenii|Rep: Debaryomyces hansenii
           chromosome D of strain CBS767 of Debaryomyces hansenii -
           Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
          Length = 80

 Score = 46.8 bits (106), Expect = 6e-04
 Identities = 27/74 (36%), Positives = 41/74 (55%)
 Frame = +3

Query: 3   LISARIAGSVARRLPNAATQVSKXXXXXXXXXSRKLHVSTTHKAAEISTILEERILGAAP 182
           ++SAR     A R   A ++  +         + + + ST     E+S+ILEERI G + 
Sbjct: 1   MLSARPVLRSAARSVAAVSRNLRVKQARPTQLAARCYASTKAAPTEVSSILEERIRGVSD 60

Query: 183 KADLEETGRVLSIG 224
           +A+L ETGRVLS+G
Sbjct: 61  EANLNETGRVLSVG 74


>UniRef50_Q98PM3 Cluster: ATP SYNTHASE BETA CHAIN; n=9;
           Mycoplasmataceae|Rep: ATP SYNTHASE BETA CHAIN -
           Mycoplasma pulmonis
          Length = 468

 Score = 46.4 bits (105), Expect = 7e-04
 Identities = 23/64 (35%), Positives = 36/64 (56%)
 Frame = +1

Query: 547 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIY 726
           E ++TGIKA+D  +PI RG +  I+G    GKT +  + I N  +F   + +K+K     
Sbjct: 122 EILETGIKAIDFFIPILRGSKLGILGGAGVGKTVVMKEIIFNASKFKAPQAQKEKKNTSS 181

Query: 727 VVIG 738
           + IG
Sbjct: 182 IFIG 185



 Score = 32.7 bits (71), Expect = 9.7
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = +2

Query: 314 LEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 472
           +  D V  ++    + +  G +V  T   ++VPVG+  + +V D LGN ++ K
Sbjct: 45  ISEDEVRAILIKTSQRVFIGQVVLNTMKKLEVPVGKSSMNKVFDILGNCLNDK 97


>UniRef50_Q9RQ79 Cluster: Beta subunit of membrane-bound ATP
           synthase; n=8; cellular organisms|Rep: Beta subunit of
           membrane-bound ATP synthase - Buchnera aphidicola
          Length = 147

 Score = 46.4 bits (105), Expect = 7e-04
 Identities = 22/59 (37%), Positives = 32/59 (54%)
 Frame = +2

Query: 329 VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRV 505
           V  +  G+   +K G IV   G  + VPVGE  LGR+++ LG  ID KG + +K    +
Sbjct: 52  VRTIAMGSSDGLKRGLIVNDLGHYIKVPVGEPTLGRILNVLGETIDNKGLLKSKRNTNI 110


>UniRef50_A5KSP4 Cluster: Sodium-transporting two-sector ATPase;
           n=1; candidate division TM7 genomosp. GTL1|Rep:
           Sodium-transporting two-sector ATPase - candidate
           division TM7 genomosp. GTL1
          Length = 495

 Score = 46.4 bits (105), Expect = 7e-04
 Identities = 22/56 (39%), Positives = 34/56 (60%)
 Frame = +1

Query: 508 FKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQ 675
           ++AP I+ R  + E + +G+ AVD+L PI  GQR  I+GD + GK+       +NQ
Sbjct: 138 YEAPSIMERTMLSEQLPSGVTAVDALFPIVLGQRIAILGDTKAGKSTFLGQLGVNQ 193



 Score = 35.9 bits (79), Expect = 1.0
 Identities = 23/78 (29%), Positives = 37/78 (47%)
 Frame = +2

Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427
           L+ I    MV F SG +GM  ++  +   +V+    +    G +      I    VGE +
Sbjct: 52  LDGIAVGAMVLFESGQRGMVRDVNAETA-LVLNLEAETTPLGTLAVLQDNIPTTRVGEGL 110

Query: 428 LGRVVDALGNPIDGKGPI 481
           +GR+V  L  P+D KG +
Sbjct: 111 IGRIVTPLCRPLDDKGTV 128


>UniRef50_A3IIS5 Cluster: Putative uncharacterized protein; n=1;
           Cyanothece sp. CCY 0110|Rep: Putative uncharacterized
           protein - Cyanothece sp. CCY 0110
          Length = 67

 Score = 46.4 bits (105), Expect = 7e-04
 Identities = 22/33 (66%), Positives = 23/33 (69%)
 Frame = -1

Query: 486 VSIGPLPSIGFPKASTTRPRICSPTGTSTIAPV 388
           V I P PSIG P+ STTRP I SPTGT  I PV
Sbjct: 34  VLISPFPSIGRPRESTTRPTIASPTGTWAIFPV 66



 Score = 33.5 bits (73), Expect = 5.5
 Identities = 14/22 (63%), Positives = 18/22 (81%)
 Frame = -2

Query: 578 STALIPVCIGSRTDTRGMIXGA 513
           S A+IPVC+GS+TD R +I GA
Sbjct: 3   SIAVIPVCMGSQTDLRAIIPGA 24


>UniRef50_A6DUD8 Cluster: F0F1 ATP synthase subunit beta; n=1;
           Lentisphaera araneosa HTCC2155|Rep: F0F1 ATP synthase
           subunit beta - Lentisphaera araneosa HTCC2155
          Length = 161

 Score = 45.6 bits (103), Expect = 0.001
 Identities = 21/68 (30%), Positives = 39/68 (57%)
 Frame = +2

Query: 302 MALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 481
           +A +L    V  +   + + +  G +V  TGA + VPVG+++LGR ++ LG+PID K  +
Sbjct: 51  VAQHLGEGVVRTIALDSTEGLHRGAVVTDTGAGLKVPVGDEVLGRAMNLLGDPIDNKPVV 110

Query: 482 DTKSRMRV 505
           ++     +
Sbjct: 111 ESSDEWEI 118


>UniRef50_Q1GNY4 Cluster: ATPase FliI/YscN; n=6; Bacteria|Rep:
           ATPase FliI/YscN - Sphingopyxis alaskensis (Sphingomonas
           alaskensis)
          Length = 443

 Score = 45.2 bits (102), Expect = 0.002
 Identities = 22/52 (42%), Positives = 34/52 (65%)
 Frame = +2

Query: 335 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTK 490
           V+ F  +K +  G  V+  GA   VPVG+ +LGR++DA GNP+DG+  I ++
Sbjct: 74  VLPFDTNKPLVTGAPVEPHGASSMVPVGKALLGRIMDAQGNPLDGRPAIKSQ 125



 Score = 33.1 bits (72), Expect = 7.3
 Identities = 18/53 (33%), Positives = 28/53 (52%)
 Frame = +1

Query: 493 PYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           P  GR   P+   RV+    +  G++A++ L+ +G GQR  II     GK+ L
Sbjct: 129 PLAGRKVNPLRRGRVT--RALNMGVRAINGLLTVGEGQRVAIIAGSGVGKSVL 179


>UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondrial
           precursor; n=1793; root|Rep: ATP synthase subunit
           beta-3, mitochondrial precursor - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 559

 Score = 45.2 bits (102), Expect = 0.002
 Identities = 22/52 (42%), Positives = 33/52 (63%)
 Frame = +2

Query: 335 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTK 490
           + + G + L++ G  V  TGA + VPVG   LGR+++ LG PID +G I T+
Sbjct: 139 IAMDGTEGLVR-GRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTE 189



 Score = 39.5 bits (88), Expect = 0.084
 Identities = 21/60 (35%), Positives = 32/60 (53%)
 Frame = +1

Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 693
           AP ++   + +E + TGIK VD L P  RG +  + G    GKT L ++ I N  + + G
Sbjct: 198 APALVDLATGQEILATGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 257


>UniRef50_Q1IR49 Cluster: ATPase FliI/YscN; n=1; Acidobacteria
           bacterium Ellin345|Rep: ATPase FliI/YscN - Acidobacteria
           bacterium (strain Ellin345)
          Length = 437

 Score = 44.4 bits (100), Expect = 0.003
 Identities = 24/53 (45%), Positives = 30/53 (56%)
 Frame = +1

Query: 493 PYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           P +G   AP+   R+ VRE M  GI+A+D  V  GRGQR  I G    GK+ L
Sbjct: 125 PVDG--SAPLPYARIPVREVMPCGIRAIDGFVTCGRGQRIGIFGGSGVGKSTL 175



 Score = 37.5 bits (83), Expect = 0.34
 Identities = 19/41 (46%), Positives = 25/41 (60%)
 Frame = +2

Query: 356 KLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGP 478
           K I+ GD V        + VG++ILGRV+DA G P+DG  P
Sbjct: 77  KGIRFGDSVVGLAQPPSIAVGDEILGRVLDATGAPLDGITP 117


>UniRef50_O83417 Cluster: Flagellum-specific ATP synthase; n=42;
           Bacteria|Rep: Flagellum-specific ATP synthase -
           Treponema pallidum
          Length = 447

 Score = 44.4 bits (100), Expect = 0.003
 Identities = 22/48 (45%), Positives = 29/48 (60%)
 Frame = +2

Query: 362 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRV 505
           ++ G  V   GA + VPVG+ +LGRV++A G  IDGKG I    R  V
Sbjct: 80  VEVGCAVVAEGAALSVPVGDALLGRVLNAFGKAIDGKGEIYAPLRSEV 127



 Score = 32.7 bits (71), Expect = 9.7
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +1

Query: 532 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           R+ +   M TG++ +DSL+ +G GQR  I      GK+ L
Sbjct: 137 RLPITRQMVTGVRVLDSLLAVGCGQRLGIFSGSGVGKSTL 176


>UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellular
           organisms|Rep: ATP synthase subunit beta - Gluconobacter
           oxydans (Gluconobacter suboxydans)
          Length = 487

 Score = 44.4 bits (100), Expect = 0.003
 Identities = 21/51 (41%), Positives = 33/51 (64%)
 Frame = +2

Query: 353 DKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRV 505
           D L++ G  V+ TG  + VPVG   LGR+++ +G PID +GPI ++ R  +
Sbjct: 73  DGLVR-GTEVRDTGKQIMVPVGPATLGRILNVVGEPIDERGPISSELRFPI 122



 Score = 34.3 bits (75), Expect = 3.2
 Identities = 23/81 (28%), Positives = 37/81 (45%)
 Frame = +1

Query: 451 GKPY*WQGTNRHEIPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDR 630
           G+P   +G    E+ +     AP    + +  E + TGIK VD L P  +G +  + G  
Sbjct: 105 GEPIDERGPISSELRFPIHRPAPSFEEQAAASEILVTGIKVVDLLCPYLKGGKIGLFGGA 164

Query: 631 QTGKTALAIDTIINQQRFNKG 693
             GKT +  + I N  + + G
Sbjct: 165 GVGKTVIIQELINNIAKAHGG 185


>UniRef50_Q1NYL2 Cluster: ATP synthase beta chain; n=1; Candidatus
           Sulcia muelleri str. Hc (Homalodisca coagulata)|Rep: ATP
           synthase beta chain - Candidatus Sulcia muelleri str. Hc
           (Homalodisca coagulata)
          Length = 129

 Score = 44.0 bits (99), Expect = 0.004
 Identities = 18/48 (37%), Positives = 29/48 (60%)
 Frame = +2

Query: 362 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRV 505
           +K G  V   G  + +P+GE+I GRV + +GN IDG G ++   R+ +
Sbjct: 72  LKRGQDVFSLGTTISMPIGEEINGRVFNVVGNTIDGLGDLNNSKRISI 119


>UniRef50_Q12T73 Cluster: ATPase FliI/YscN; n=1; Shewanella
           denitrificans OS217|Rep: ATPase FliI/YscN - Shewanella
           denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
          Length = 436

 Score = 43.6 bits (98), Expect = 0.005
 Identities = 19/42 (45%), Positives = 28/42 (66%)
 Frame = +1

Query: 526 IPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           + R ++ EP+ T IKA+DS +PIG+GQR  I+     GK+ L
Sbjct: 130 LTRAAIDEPLTTRIKALDSFIPIGKGQRVGILAGSGVGKSTL 171



 Score = 35.9 bits (79), Expect = 1.0
 Identities = 17/53 (32%), Positives = 30/53 (56%)
 Frame = +2

Query: 308 LNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 466
           +++    V ++ F +   I  GD +  +G  + +P+G  +LG VVDA G P+D
Sbjct: 57  ISISETQVKLMPFQSASGISFGDKLIGSGTSIRLPMGSGMLGHVVDAFGQPLD 109


>UniRef50_Q9RQ76 Cluster: Beta subunit of membrane-bound ATP
           synthase; n=16; Gammaproteobacteria|Rep: Beta subunit of
           membrane-bound ATP synthase - Buchnera aphidicola
          Length = 147

 Score = 42.7 bits (96), Expect = 0.009
 Identities = 22/59 (37%), Positives = 31/59 (52%)
 Frame = +2

Query: 329 VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRV 505
           V  +  G    +  G  V   G  + VPVG   LGR+V+ LG PID KGP++ K   ++
Sbjct: 52  VRTIAMGASDGLSRGLSVLDLGHGIKVPVGISTLGRIVNVLGCPIDMKGPLNNKDGSKI 110


>UniRef50_Q6D5F7 Cluster: Type III secretion protein; n=10;
           Enterobacteriaceae|Rep: Type III secretion protein -
           Erwinia carotovora subsp. atroseptica (Pectobacterium
           atrosepticum)
          Length = 456

 Score = 42.3 bits (95), Expect = 0.012
 Identities = 27/68 (39%), Positives = 36/68 (52%)
 Frame = +1

Query: 469 QGTNRHEIPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTA 648
           Q T R + P  G    P   PR+S  +P+ TG++AVD L+ IG+GQR  I      GKT 
Sbjct: 135 QVTGRTQ-PVLGDAPPPTSRPRIS--QPLPTGLRAVDGLLTIGQGQRVGIFAGAGCGKTT 191

Query: 649 LAIDTIIN 672
           L  +   N
Sbjct: 192 LLAELARN 199


>UniRef50_Q02C61 Cluster: ATPase, FliI/YscN family; n=2;
           Bacteria|Rep: ATPase, FliI/YscN family - Solibacter
           usitatus (strain Ellin6076)
          Length = 449

 Score = 42.3 bits (95), Expect = 0.012
 Identities = 18/42 (42%), Positives = 28/42 (66%)
 Frame = +1

Query: 526 IPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           + R  + +P+ TGI+A+D+L+P G+GQR  I G    GK+ L
Sbjct: 133 LDRQHITQPLVTGIRAIDALLPCGKGQRIGIFGGSGVGKSTL 174


>UniRef50_A7CYE2 Cluster: Flagellar protein export ATPase FliI; n=1;
           Opitutaceae bacterium TAV2|Rep: Flagellar protein export
           ATPase FliI - Opitutaceae bacterium TAV2
          Length = 461

 Score = 42.3 bits (95), Expect = 0.012
 Identities = 18/29 (62%), Positives = 23/29 (79%), Gaps = 1/29 (3%)
 Frame = +2

Query: 407 VPV-GEQILGRVVDALGNPIDGKGPIDTK 490
           +PV G Q+LGRV+DALG P DG GP+ T+
Sbjct: 109 IPVSGAQLLGRVLDALGRPFDGAGPVPTR 137



 Score = 39.5 bits (88), Expect = 0.084
 Identities = 17/47 (36%), Positives = 28/47 (59%)
 Frame = +1

Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           + P  + R  +RE + TG++A+D+  P+GRGQR  +      GK+ L
Sbjct: 145 RPPHPLRRQRIREALPTGVRALDAFTPLGRGQRLGLFAGSGVGKSTL 191


>UniRef50_P0A1B9 Cluster: Probable ATP synthase spaL; n=32;
           Proteobacteria|Rep: Probable ATP synthase spaL -
           Salmonella typhimurium
          Length = 431

 Score = 42.3 bits (95), Expect = 0.012
 Identities = 21/45 (46%), Positives = 26/45 (57%)
 Frame = +1

Query: 517 PIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           P    RV VREP+ TG++A+D L+  G GQR  I      GKT L
Sbjct: 124 PSYASRVGVREPLITGVRAIDGLLTCGVGQRMGIFASAGCGKTML 168


>UniRef50_P55717 Cluster: Probable ATP synthase y4yI; n=27;
           Bacteria|Rep: Probable ATP synthase y4yI - Rhizobium sp.
           (strain NGR234)
          Length = 451

 Score = 41.9 bits (94), Expect = 0.016
 Identities = 17/36 (47%), Positives = 25/36 (69%)
 Frame = +2

Query: 380 VKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDT 487
           V  TG + +VP+G  +LGRV+D+   P+DGKG + T
Sbjct: 100 VVSTGRMREVPIGPDLLGRVIDSRCRPLDGKGEVKT 135



 Score = 36.3 bits (80), Expect = 0.78
 Identities = 21/53 (39%), Positives = 28/53 (52%)
 Frame = +1

Query: 493 PYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           P  GR  AP  + R  V  P   G++A+D L+  G GQR  I G+   GK+ L
Sbjct: 140 PLHGR--APNPMTRRMVERPFPLGVRALDGLLTCGEGQRIGIYGEPGGGKSTL 190


>UniRef50_A5D0F3 Cluster: Flagellar biosynthesis/type III secretory
           pathway ATPase; n=4; Bacteria|Rep: Flagellar
           biosynthesis/type III secretory pathway ATPase -
           Pelotomaculum thermopropionicum SI
          Length = 446

 Score = 41.1 bits (92), Expect = 0.028
 Identities = 20/45 (44%), Positives = 28/45 (62%)
 Frame = +2

Query: 347 GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 481
           G  K I +G  V  +G    + VGE +LGRV++ LG P+DG GP+
Sbjct: 77  GELKGIYQGCSVTPSGRPFTIKVGEGLLGRVLNGLGEPMDGLGPV 121



 Score = 36.3 bits (80), Expect = 0.78
 Identities = 18/47 (38%), Positives = 26/47 (55%)
 Frame = +1

Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           + P  + R  + E + TG++AVD L+  GRGQR  I      GK+ L
Sbjct: 133 RPPNPLKRRRITEVLSTGVRAVDGLLTCGRGQRIGIFSGSGVGKSTL 179


>UniRef50_Q971B7 Cluster: V-type ATP synthase alpha chain; n=11;
           Archaea|Rep: V-type ATP synthase alpha chain -
           Sulfolobus tokodaii
          Length = 592

 Score = 40.7 bits (91), Expect = 0.036
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
 Frame = +2

Query: 248 LEDIQAEEMVEFSS-GLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQ 424
           + + Q  E+V  S   L G    +E D   + V+ +   +K GD V R+GA + V +G  
Sbjct: 20  MREAQMFEVVYVSDLKLVGEITRIEGDRAFIQVYESTDGVKPGDKVYRSGAPLSVELGPG 79

Query: 425 ILGRVVDALGNPID 466
           ++G++ D L  P+D
Sbjct: 80  LIGKIYDGLQRPLD 93



 Score = 37.1 bits (82), Expect = 0.45
 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
 Frame = +1

Query: 478 NRHEIPYEGRFKAPIIIPR-----VSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGK 642
           N  EIP +   K P+ IPR     +   EP+ TGI+ +D++ PI +G    I G   +GK
Sbjct: 181 NGDEIPVKMYQKWPVRIPRPYKEKLEPVEPLLTGIRVLDTVFPIAKGGTAAIPGPFGSGK 240

Query: 643 T 645
           T
Sbjct: 241 T 241


>UniRef50_Q8F319 Cluster: Flagellum-specific ATP synthase fliI; n=4;
           Leptospira|Rep: Flagellum-specific ATP synthase fliI -
           Leptospira interrogans
          Length = 454

 Score = 40.3 bits (90), Expect = 0.048
 Identities = 17/34 (50%), Positives = 26/34 (76%)
 Frame = +2

Query: 389 TGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTK 490
           +G  + +PVG+++LGRV++ +G PID KG I TK
Sbjct: 97  SGRKLAIPVGKELLGRVLNGVGRPIDKKGHIITK 130



 Score = 39.1 bits (87), Expect = 0.11
 Identities = 17/47 (36%), Positives = 29/47 (61%)
 Frame = +1

Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           + P  + R  +R+ + TG++A+D ++ IGRGQR  I      GK++L
Sbjct: 138 EVPNPLDRPIIRDVLMTGVRAIDGILTIGRGQRVGIFSGSGVGKSSL 184


>UniRef50_Q7UIJ0 Cluster: Flagellum-specific ATP synthase; n=3;
           Planctomycetaceae|Rep: Flagellum-specific ATP synthase -
           Rhodopirellula baltica
          Length = 467

 Score = 40.3 bits (90), Expect = 0.048
 Identities = 21/68 (30%), Positives = 35/68 (51%)
 Frame = +1

Query: 448 FGKPY*WQGTNRHEIPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGD 627
           FG+P   +  +   +       AP  + R  + EP+QTG++A+D+++  G GQR  I   
Sbjct: 119 FGRPIDGKPLSDDLVRVSASRAAPDSLDRPPIDEPLQTGVRAIDAMLTCGVGQRLGIFAG 178

Query: 628 RQTGKTAL 651
              GK+ L
Sbjct: 179 SGVGKSTL 186



 Score = 37.9 bits (84), Expect = 0.26
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = +2

Query: 371 GDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 472
           GD V+     + + VG+ + GRV+DA G PIDGK
Sbjct: 93  GDRVRLVSRSLTLRVGDSLCGRVIDAFGRPIDGK 126


>UniRef50_O07025 Cluster: Flagellum-specific ATP synthase; n=24;
           Epsilonproteobacteria|Rep: Flagellum-specific ATP
           synthase - Helicobacter pylori (Campylobacter pylori)
          Length = 434

 Score = 40.3 bits (90), Expect = 0.048
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
 Frame = +2

Query: 275 VEFSSGLK--GMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDA 448
           +E S G +  GM +  E +  G   F   +  + GD V      ++ PVG  +LGRV++ 
Sbjct: 46  IEKSDGSECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLLGRVLNP 105

Query: 449 LGNPIDGKGPID 484
           LG  ID KG +D
Sbjct: 106 LGQVIDNKGALD 117


>UniRef50_P23445 Cluster: Flagellum-specific ATP synthase; n=18;
           Bacteria|Rep: Flagellum-specific ATP synthase - Bacillus
           subtilis
          Length = 440

 Score = 40.3 bits (90), Expect = 0.048
 Identities = 18/58 (31%), Positives = 33/58 (56%)
 Frame = +2

Query: 293 LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 466
           +K   +  + +N+ ++ +     I  G IV+ TG  + V VG  ++G+V+DA G P+D
Sbjct: 58  IKAEVVGFQEENILLMPYLEAASIAPGSIVEATGESLRVKVGTGLIGQVIDAFGEPLD 115



 Score = 37.9 bits (84), Expect = 0.26
 Identities = 22/68 (32%), Positives = 34/68 (50%)
 Frame = +1

Query: 448 FGKPY*WQGTNRHEIPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGD 627
           FG+P   +   R   P       P  + R  +RE M  G++++DSL+ +G+GQR  I   
Sbjct: 110 FGEPLD-ESFCRKVSPVSTEQSPPNPMKRPPIREKMGVGVRSIDSLLTVGKGQRIGIFAG 168

Query: 628 RQTGKTAL 651
              GK+ L
Sbjct: 169 SGVGKSTL 176


>UniRef50_A3WGS0 Cluster: FliI, Flagellum-specific ATPase; n=2;
           Erythrobacter|Rep: FliI, Flagellum-specific ATPase -
           Erythrobacter sp. NAP1
          Length = 450

 Score = 39.9 bits (89), Expect = 0.064
 Identities = 20/48 (41%), Positives = 31/48 (64%)
 Frame = +2

Query: 335 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGP 478
           +++ G+ +L++    V+  G+   V VG+ +LGR VD LG PIDG GP
Sbjct: 72  MMLLGDAQLLQPRASVRAIGSPGSVRVGDALLGRAVDGLGQPIDG-GP 118



 Score = 34.3 bits (75), Expect = 3.2
 Identities = 19/47 (40%), Positives = 27/47 (57%)
 Frame = +1

Query: 526 IPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTI 666
           + R  V E    G++AV++L  +G GQR  II     GK+ L IDT+
Sbjct: 136 LARSGVSESFDCGVRAVNALATMGVGQRMGIIAGSGVGKSVL-IDTV 181


>UniRef50_A6CBM4 Cluster: Transcription termination factor Rho; n=1;
           Planctomyces maris DSM 8797|Rep: Transcription
           termination factor Rho - Planctomyces maris DSM 8797
          Length = 543

 Score = 39.5 bits (88), Expect = 0.084
 Identities = 17/37 (45%), Positives = 24/37 (64%)
 Frame = +1

Query: 550 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAID 660
           PM   ++ +D L PIG+GQR L++   +TGKT L  D
Sbjct: 277 PMPITMRIMDMLTPIGKGQRALVVAPPRTGKTMLLQD 313


>UniRef50_Q4IW70 Cluster: ATP synthase F1, beta subunit; n=1;
           Azotobacter vinelandii AvOP|Rep: ATP synthase F1, beta
           subunit - Azotobacter vinelandii AvOP
          Length = 473

 Score = 39.1 bits (87), Expect = 0.11
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +1

Query: 517 PIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTI 666
           P +  + +  EP  TGIK +D L P+ +G +  + G    GKT L ++ I
Sbjct: 120 PPLAAQAATSEPFATGIKVIDLLTPLVQGGKAAMFGGAGVGKTVLVMELI 169



 Score = 33.5 bits (73), Expect = 5.5
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = +2

Query: 311 NLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGP 478
           +L+   V  +       +  G + +  G  + VPVGE +LGR++D +G  +  KGP
Sbjct: 50  HLDARRVRAIALAATSGLPRGVMARTLGGPLRVPVGEAVLGRLLD-VGGVVGDKGP 104


>UniRef50_A5IFJ3 Cluster: ATP synthase F1, beta chain; n=3;
           Legionella pneumophila|Rep: ATP synthase F1, beta chain
           - Legionella pneumophila (strain Corby)
          Length = 474

 Score = 39.1 bits (87), Expect = 0.11
 Identities = 17/59 (28%), Positives = 33/59 (55%)
 Frame = +2

Query: 311 NLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDT 487
           +L+  +V  +       ++ G IV   G  + +PV ++ LGR+++  G P+DG  P++T
Sbjct: 65  HLDEHHVRAITLHRASGLQRGLIVYDQGTSLRIPVSKECLGRLLNIFGEPLDGAPPLET 123


>UniRef50_A7R4X8 Cluster: Chromosome undetermined scaffold_808,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome undetermined scaffold_808, whole genome
           shotgun sequence - Vitis vinifera (Grape)
          Length = 106

 Score = 39.1 bits (87), Expect = 0.11
 Identities = 18/36 (50%), Positives = 24/36 (66%)
 Frame = +2

Query: 257 IQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLI 364
           I A E+VEF  G   + LNLE +NVGVV+ G+  +I
Sbjct: 71  IMASELVEFEEGTIAITLNLESNNVGVVLMGDGLMI 106


>UniRef50_O67531 Cluster: Flagellum-specific ATP synthase; n=2;
           Aquifex aeolicus|Rep: Flagellum-specific ATP synthase -
           Aquifex aeolicus
          Length = 443

 Score = 39.1 bits (87), Expect = 0.11
 Identities = 20/67 (29%), Positives = 34/67 (50%)
 Frame = +2

Query: 269 EMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDA 448
           E+   S  ++G  +    D V V+ +     +++GD V     +V    G  ++G+VVD 
Sbjct: 52  EIQSNSRRIRGEVIGFSGDKVLVMPYEPVFGLRKGDKVLLKNELVSTKTGNGVVGKVVDP 111

Query: 449 LGNPIDG 469
            GNP+DG
Sbjct: 112 FGNPLDG 118


>UniRef50_A2WHU5 Cluster: Flagellar biosynthesis/type III secretory
           pathway ATPase; n=1; Burkholderia dolosa AUO158|Rep:
           Flagellar biosynthesis/type III secretory pathway ATPase
           - Burkholderia dolosa AUO158
          Length = 390

 Score = 38.7 bits (86), Expect = 0.15
 Identities = 19/46 (41%), Positives = 27/46 (58%)
 Frame = +1

Query: 517 PIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALA 654
           P I  R+ +R    TG++A+D L+  G GQR  I  +  TGKT L+
Sbjct: 126 PSIDNRLPIRTRFLTGVRAIDGLMTCGIGQRVGIFAEAGTGKTTLS 171


>UniRef50_Q9PLK9 Cluster: Virulence ATPase, putative; n=9;
           Chlamydiaceae|Rep: Virulence ATPase, putative -
           Chlamydia muridarum
          Length = 434

 Score = 38.3 bits (85), Expect = 0.19
 Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
 Frame = +1

Query: 517 PIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTII--NQQRFN 687
           P  + R  ++E   TGI+A+D+L+ IG GQR  I  +   GK++L + TI   +QQ  N
Sbjct: 129 PSPMSRTPIQEIFPTGIRAIDALLTIGEGQRVGIFSEPGGGKSSL-LSTIAKGSQQTIN 186



 Score = 35.9 bits (79), Expect = 1.0
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +2

Query: 407 VPVGEQILGRVVDALGNPIDGKGPI 481
           +P+   +LGRV+D  GNP+DG  P+
Sbjct: 92  LPLSHHLLGRVIDGFGNPLDGNPPL 116


>UniRef50_A6DIN5 Cluster: Transcription termination factor Rho; n=1;
           Lentisphaera araneosa HTCC2155|Rep: Transcription
           termination factor Rho - Lentisphaera araneosa HTCC2155
          Length = 613

 Score = 38.3 bits (85), Expect = 0.19
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = +1

Query: 547 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           EP    ++ +D +VP+G GQR LI+   +TGKT L
Sbjct: 348 EPTNHSMRVLDLVVPVGAGQRGLIVAPPRTGKTVL 382


>UniRef50_Q8TUT0 Cluster: V-type ATP synthase beta chain (EC
           3.6.3.14) (V-type ATPase subunit B) [Contains: Mka atpB
           intein]; n=8; cellular organisms|Rep: V-type ATP
           synthase beta chain (EC 3.6.3.14) (V-type ATPase subunit
           B) [Contains: Mka atpB intein] - Methanopyrus kandleri
          Length = 990

 Score = 38.3 bits (85), Expect = 0.19
 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +2

Query: 296 KGMALNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 472
           +G  L    D   V VF G   L      V+ TG  + +PV   +LGR+++  G PIDG 
Sbjct: 48  RGQVLEARRDAAVVQVFEGTSGLDTTSTKVRFTGETLRIPVSTDLLGRILNGRGEPIDG- 106

Query: 473 GP 478
           GP
Sbjct: 107 GP 108


>UniRef50_Q8KKY7 Cluster: Type III secretion system ATP synthase
           protein; n=2; Proteobacteria|Rep: Type III secretion
           system ATP synthase protein - Rhizobium etli (strain CFN
           42 / ATCC 51251)
          Length = 439

 Score = 37.9 bits (84), Expect = 0.26
 Identities = 18/51 (35%), Positives = 28/51 (54%)
 Frame = +1

Query: 526 IPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQ 678
           + R  +R+P  +GI A+D L+  G+GQR  I G    GK+ L    + N +
Sbjct: 137 LSRRPIRQPFTSGIAALDGLLTCGQGQRIGIFGAPGAGKSTLVSQIVANNK 187


>UniRef50_A1SEP6 Cluster: ATPase, FliI/YscN family; n=10;
           Bacteria|Rep: ATPase, FliI/YscN family - Nocardioides
           sp. (strain BAA-499 / JS614)
          Length = 435

 Score = 37.9 bits (84), Expect = 0.26
 Identities = 18/46 (39%), Positives = 27/46 (58%)
 Frame = +2

Query: 347 GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPID 484
           G+   ++ GD V   G  + +PVGE + GRV+D LG P+D    +D
Sbjct: 72  GDTTGLRVGDHVVNHGEGLRIPVGEALRGRVLDGLGRPMDDGPALD 117



 Score = 34.3 bits (75), Expect = 3.2
 Identities = 15/45 (33%), Positives = 27/45 (60%)
 Frame = +1

Query: 517 PIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           P  + R  + + +  G++A+D+L+  GRGQR  I+     GK++L
Sbjct: 129 PAALSRPRIDQQLGLGVRAMDALISCGRGQRLGIMAGSGVGKSSL 173


>UniRef50_P74857 Cluster: Probable secretion system apparatus ATP
           synthase ssaN; n=17; Gammaproteobacteria|Rep: Probable
           secretion system apparatus ATP synthase ssaN -
           Salmonella typhimurium
          Length = 433

 Score = 37.9 bits (84), Expect = 0.26
 Identities = 14/22 (63%), Positives = 18/22 (81%)
 Frame = +2

Query: 407 VPVGEQILGRVVDALGNPIDGK 472
           VPVGE +LGRV+D  G P+DG+
Sbjct: 91  VPVGEALLGRVIDGFGRPLDGR 112



 Score = 36.3 bits (80), Expect = 0.78
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = +1

Query: 517 PIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           P  + R  + +P+ TGI+A+DS+   G GQR  I      GK+ L
Sbjct: 127 PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTL 171


>UniRef50_Q53153 Cluster: FliI protein; n=7; Rhodobacteraceae|Rep:
           FliI protein - Rhodobacter sphaeroides (Rhodopseudomonas
           sphaeroides)
          Length = 442

 Score = 37.5 bits (83), Expect = 0.34
 Identities = 18/55 (32%), Positives = 31/55 (56%)
 Frame = +1

Query: 487 EIPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           E P  GR   P+   R +V  P+  G++A+++ + +G+GQR  I+     GK+ L
Sbjct: 125 EWPLAGRVMNPLA--RTAVSRPLDVGVRAINAALTVGQGQRIGIVAGSGEGKSVL 177


>UniRef50_Q1FJZ5 Cluster: Transcription termination factor Rho; n=3;
           Clostridiales|Rep: Transcription termination factor Rho
           - Clostridium phytofermentans ISDg
          Length = 650

 Score = 37.5 bits (83), Expect = 0.34
 Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +1

Query: 532 RVSVREP-MQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           R+ +  P  Q  ++ VD + PIG+GQR +I+   +TGKT L
Sbjct: 373 RIHLETPGCQVAMRMVDLISPIGKGQRGMIVSQPKTGKTTL 413


>UniRef50_A2W3Z6 Cluster: ATPase FliI/YscN; n=1; Burkholderia
           cenocepacia PC184|Rep: ATPase FliI/YscN - Burkholderia
           cenocepacia PC184
          Length = 386

 Score = 37.5 bits (83), Expect = 0.34
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +2

Query: 410 PVGEQILGRVVDALGNPIDGKGPI 481
           PVGE + GRV+D LG P+D  GP+
Sbjct: 27  PVGEALFGRVLDGLGRPLDDLGPV 50


>UniRef50_Q5SJE9 Cluster: Transcription termination factor Rho; n=3;
           Bacteria|Rep: Transcription termination factor Rho -
           Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
          Length = 426

 Score = 37.1 bits (82), Expect = 0.45
 Identities = 16/34 (47%), Positives = 21/34 (61%)
 Frame = +1

Query: 550 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           P +   + +D L PIGRGQR LI+   + GKT L
Sbjct: 160 PDELSTRVIDLLAPIGRGQRGLIVAPPKAGKTTL 193


>UniRef50_Q55738 Cluster: DNA gyrase subunit A; n=37;
           Cyanobacteria|Rep: DNA gyrase subunit A - Synechocystis
           sp. (strain PCC 6803)
          Length = 860

 Score = 37.1 bits (82), Expect = 0.45
 Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
 Frame = +2

Query: 272 MVEFSSGLK-GMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIV----DVPVGEQILGR 436
           ++  SSG+  GMA N+ P N+G V+ G   LI+  +I ++    +    D P G QILGR
Sbjct: 168 LINGSSGIAVGMATNIPPHNLGEVIDGAIALIRNPEITEQELMQIIPGPDFPTGAQILGR 227


>UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellular
           organisms|Rep: ATP synthase subunit beta -
           Fervidobacterium islandicum
          Length = 472

 Score = 37.1 bits (82), Expect = 0.45
 Identities = 18/49 (36%), Positives = 29/49 (59%)
 Frame = +2

Query: 335 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 481
           V +   D L++ G  V+ TG  +  PVG  +LGR+ + +G PID +G +
Sbjct: 60  VAMDSTDGLVR-GLEVENTGEPIKAPVGRGVLGRMFNVIGEPIDEQGEL 107



 Score = 34.3 bits (75), Expect = 3.2
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = +1

Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIIN 672
           AP +  + +  E ++TG+K +D L P  +G +    G    GKT L ++ I N
Sbjct: 119 APSMTEQKTEIEILETGLKVIDLLAPFPKGGKIGFFGGAGVGKTVLVMEMIRN 171


>UniRef50_Q74G36 Cluster: Flagellum-specific ATP synthase FliI;
           n=15; Bacteria|Rep: Flagellum-specific ATP synthase FliI
           - Geobacter sulfurreducens
          Length = 441

 Score = 36.7 bits (81), Expect = 0.59
 Identities = 19/34 (55%), Positives = 23/34 (67%)
 Frame = +2

Query: 380 VKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 481
           VKR  A   + VG  +LGRV+D LG PID KGP+
Sbjct: 87  VKRKKA--SLGVGPGLLGRVIDGLGVPIDDKGPL 118



 Score = 34.7 bits (76), Expect = 2.4
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = +1

Query: 532 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           R  +R+P+  GI+A+++L+  G GQR  I+     GK+ L
Sbjct: 136 RRPIRQPLDLGIRAINALLTCGEGQRVGIMAGSGVGKSTL 175


>UniRef50_Q62EB7 Cluster: ATP synthase F1, beta subunit; n=27;
           Bacteria|Rep: ATP synthase F1, beta subunit -
           Burkholderia mallei (Pseudomonas mallei)
          Length = 534

 Score = 36.7 bits (81), Expect = 0.59
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = +1

Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTI 666
           AP++  + S      TGIK +D L P+ +G +  + G    GKT   ++ I
Sbjct: 149 APLLAEQKSANALFATGIKVIDLLAPLAQGGKAAMFGGAGVGKTVFVMELI 199



 Score = 34.3 bits (75), Expect = 3.2
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +2

Query: 362 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 466
           ++ G  V+ TG  + VPVG+ +LGR++   G P D
Sbjct: 97  LRRGAAVRATGGPIRVPVGDAVLGRLLSVTGAPGD 131


>UniRef50_A3Z0H3 Cluster: V-type ATPase, A subunit; n=5;
           Bacteria|Rep: V-type ATPase, A subunit - Synechococcus
           sp. WH 5701
          Length = 621

 Score = 36.7 bits (81), Expect = 0.59
 Identities = 19/59 (32%), Positives = 31/59 (52%)
 Frame = +2

Query: 293 LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDG 469
           LK   L +        VF + + +  GD V++TG ++ V +G  +L +V D L NP+ G
Sbjct: 51  LKAEVLRVHGSTADAQVFESTRGVGIGDPVEQTGELLSVKLGPGLLTQVYDGLQNPLAG 109


>UniRef50_Q98QB6 Cluster: ATP synthase subunit beta 2; n=5;
           Mycoplasma|Rep: ATP synthase subunit beta 2 - Mycoplasma
           pulmonis
          Length = 468

 Score = 36.7 bits (81), Expect = 0.59
 Identities = 21/56 (37%), Positives = 27/56 (48%)
 Frame = +1

Query: 538 SVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEK 705
           S  E + TGIK +D  VPI +G +  I G    GKT +  + I N  R     D K
Sbjct: 117 SDNEIINTGIKIIDFFVPIIKGSKIGIFGGAGVGKTIIIKELIFNISRQRDSNDVK 172


>UniRef50_UPI00004D9CFE Cluster: FH1/FH2 domain-containing protein 3
           (Formin homolog overexpressed in spleen 2) (hFHOS2)
           (Formactin-2).; n=3; Xenopus tropicalis|Rep: FH1/FH2
           domain-containing protein 3 (Formin homolog
           overexpressed in spleen 2) (hFHOS2) (Formactin-2). -
           Xenopus tropicalis
          Length = 1524

 Score = 36.3 bits (80), Expect = 0.78
 Identities = 19/36 (52%), Positives = 24/36 (66%)
 Frame = +1

Query: 82  PQWPWHLANYMSQPPTKLPRSPPSSKRGSLEPRPRL 189
           P+WP       S PPT+L +SPPSS R S +P+PRL
Sbjct: 390 PEWP-------SPPPTRLAQSPPSSSRPS-QPQPRL 417


>UniRef50_Q9FC33 Cluster: Putative transcription terminator factor;
           n=2; Streptomyces|Rep: Putative transcription terminator
           factor - Streptomyces coelicolor
          Length = 415

 Score = 36.3 bits (80), Expect = 0.78
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = +1

Query: 568 KAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           + VD L P+G+GQR LI+   +TGKT L
Sbjct: 152 RVVDLLAPVGKGQRGLIVAPPKTGKTVL 179


>UniRef50_Q058C4 Cluster: Flagellum-specific ATP synthase; n=1;
           Buchnera aphidicola str. Cc (Cinara cedri)|Rep:
           Flagellum-specific ATP synthase - Buchnera aphidicola
           subsp. Cinara cedri
          Length = 457

 Score = 36.3 bits (80), Expect = 0.78
 Identities = 19/70 (27%), Positives = 32/70 (45%)
 Frame = +2

Query: 290 GLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDG 469
           G K     L P      +F   K+  E  I  +       P G ++LGRV++  G+P+D 
Sbjct: 71  GFKKKIFFLIPIQNSYGIFPGAKVFSENYIFNKDIKFQYFPFGSKLLGRVLNGFGHPLDN 130

Query: 470 KGPIDTKSRM 499
            G ++ K ++
Sbjct: 131 LGDLNLKKKL 140



 Score = 34.3 bits (75), Expect = 3.2
 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = +1

Query: 511 KAPII-IPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           K PI  + R  + E + TG+ A++SL+ +GRGQR  I      GK+ L
Sbjct: 146 KKPINPLNRKPITEILDTGVCAINSLLTVGRGQRMGIFSQAGIGKSML 193


>UniRef50_A7M2K2 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides ovatus ATCC 8483|Rep: Putative
           uncharacterized protein - Bacteroides ovatus ATCC 8483
          Length = 765

 Score = 36.3 bits (80), Expect = 0.78
 Identities = 16/31 (51%), Positives = 20/31 (64%)
 Frame = +1

Query: 568 KAVDSLVPIGRGQRELIIGDRQTGKTALAID 660
           + VD   PIG+GQR LI+   +TGKT L  D
Sbjct: 507 RVVDLFAPIGKGQRALIVAQPKTGKTILMKD 537


>UniRef50_P52607 Cluster: Flagellum-specific ATP synthase; n=3;
           Borrelia burgdorferi group|Rep: Flagellum-specific ATP
           synthase - Borrelia burgdorferi (Lyme disease
           spirochete)
          Length = 436

 Score = 36.3 bits (80), Expect = 0.78
 Identities = 15/38 (39%), Positives = 26/38 (68%)
 Frame = +2

Query: 362 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKG 475
           I+ G+ V      +++ + +++LGRV+D+LG PID KG
Sbjct: 78  IEVGNKVYSLNKGLEINLSDELLGRVIDSLGRPIDNKG 115


>UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5;
           Bacteroides|Rep: ATP synthase subunit beta - Bacteroides
           fragilis
          Length = 505

 Score = 36.3 bits (80), Expect = 0.78
 Identities = 18/49 (36%), Positives = 29/49 (59%)
 Frame = +2

Query: 323 DNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDG 469
           + V  V   +   ++ G  V  TG  + +PVGEQI GR+++ +G+ IDG
Sbjct: 57  NTVRTVAMDSTDGLQRGMKVFPTGGPITMPVGEQIKGRLMNVVGDSIDG 105



 Score = 35.5 bits (78), Expect = 1.4
 Identities = 18/52 (34%), Positives = 29/52 (55%)
 Frame = +1

Query: 538 SVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 693
           +V+E + TGIK +D L P  +G +  + G    GKT L ++ I N  + + G
Sbjct: 129 TVQEVLFTGIKVIDLLEPYSKGGKIGLFGGAGVGKTVLIMELINNIAKKHNG 180


>UniRef50_UPI00015B5329 Cluster: PREDICTED: similar to GA14484-PA;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           GA14484-PA - Nasonia vitripennis
          Length = 341

 Score = 35.9 bits (79), Expect = 1.0
 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +2

Query: 299 GMALNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKG 475
           G  L +      V VF G   +  +    + TG I+  PV E +LGRV +  G PID KG
Sbjct: 68  GQVLEVSGSKAVVQVFEGTSGIDAKNTHCEFTGDILRTPVSEDMLGRVFNGSGKPID-KG 126

Query: 476 P 478
           P
Sbjct: 127 P 127


>UniRef50_Q8F7C5 Cluster: Transcription termination factor rho;
           n=54; cellular organisms|Rep: Transcription termination
           factor rho - Leptospira interrogans
          Length = 482

 Score = 35.9 bits (79), Expect = 1.0
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +1

Query: 547 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           +P     + +D + PIG+GQR LI+   +TGKT L
Sbjct: 216 DPSMLDTRILDLMCPIGKGQRALIVAPPRTGKTIL 250


>UniRef50_Q0EZL2 Cluster: Flagellum-specific ATP synthase; n=1;
           Mariprofundus ferrooxydans PV-1|Rep: Flagellum-specific
           ATP synthase - Mariprofundus ferrooxydans PV-1
          Length = 471

 Score = 35.9 bits (79), Expect = 1.0
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +2

Query: 347 GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 466
           G+ + I  GD ++       + VG  +LGRV+DA GNP+D
Sbjct: 80  GSTRGIAPGDPIEPLSTTPSIRVGPHLLGRVLDAQGNPMD 119



 Score = 35.9 bits (79), Expect = 1.0
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = +1

Query: 532 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           R ++  PMQ G++A+D+ +P+G GQR  +      GK+ L
Sbjct: 142 RHTIDAPMQLGVRAIDACMPMGWGQRMGLFAGAGVGKSTL 181


>UniRef50_P15313 Cluster: Vacuolar ATP synthase subunit B, kidney
           isoform; n=451; cellular organisms|Rep: Vacuolar ATP
           synthase subunit B, kidney isoform - Homo sapiens
           (Human)
          Length = 513

 Score = 35.9 bits (79), Expect = 1.0
 Identities = 17/31 (54%), Positives = 21/31 (67%)
 Frame = +2

Query: 389 TGAIVDVPVGEQILGRVVDALGNPIDGKGPI 481
           TG I+  PV E +LGRV +  G PID KGP+
Sbjct: 109 TGDILRTPVSEDMLGRVFNGSGKPID-KGPV 138


>UniRef50_P38606 Cluster: Vacuolar ATP synthase catalytic subunit A;
           n=209; cellular organisms|Rep: Vacuolar ATP synthase
           catalytic subunit A - Homo sapiens (Human)
          Length = 617

 Score = 35.9 bits (79), Expect = 1.0
 Identities = 19/59 (32%), Positives = 29/59 (49%)
 Frame = +2

Query: 287 SGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPI 463
           S L G  + LE D   + V+     +  GD V RTG  + V +G  I+G + D +  P+
Sbjct: 48  SELVGEIIRLEGDMATIQVYEETSGVSVGDPVLRTGKPLSVELGPGIMGAIFDGIQRPL 106


>UniRef50_P84582 Cluster: ATP synthase subunit alpha; n=1; Populus
           euphratica|Rep: ATP synthase subunit alpha - Populus
           euphratica (Euphrates poplar)
          Length = 98

 Score = 35.9 bits (79), Expect = 1.0
 Identities = 17/38 (44%), Positives = 25/38 (65%)
 Frame = +2

Query: 359 LIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 472
           +++ GD + R   I  +PV E  LGRV++AL  PIDG+
Sbjct: 7   VLQVGDGIAR---IAQIPVSEAYLGRVINALAKPIDGR 41


>UniRef50_UPI0000E823B4 Cluster: PREDICTED: similar to vacuolar
           proton-ATPase A-subunit, partial; n=2; Gallus
           gallus|Rep: PREDICTED: similar to vacuolar proton-ATPase
           A-subunit, partial - Gallus gallus
          Length = 262

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 19/57 (33%), Positives = 29/57 (50%)
 Frame = +2

Query: 293 LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPI 463
           L G  + LE D   + V+     ++ GD V RTG  + V +G  ILG + D +  P+
Sbjct: 50  LVGEIIRLEGDMATLQVYEETSGLRVGDPVLRTGQPLSVELGPGILGSIFDGIQRPL 106


>UniRef50_Q6KIC3 Cluster: ATP synthase beta chain; n=1; Mycoplasma
           mobile|Rep: ATP synthase beta chain - Mycoplasma mobile
          Length = 784

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 18/69 (26%), Positives = 38/69 (55%)
 Frame = +1

Query: 487 EIPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTI 666
           E+ ++      ++ P+ ++   ++TGIK +D L+PI +G +  ++G    GKT +  + I
Sbjct: 410 EMQHDSEATRYVVSPKNAI---LETGIKVIDVLLPIPKGGKTGLLGGAGVGKTVIVQELI 466

Query: 667 INQQRFNKG 693
               +F+ G
Sbjct: 467 NAFIKFHDG 475



 Score = 33.1 bits (72), Expect = 7.3
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +2

Query: 329 VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 466
           V   V GN+  +K G  VK       + + +++LGRV+D +G  +D
Sbjct: 349 VSTFVLGNETGLKIGTKVKSKNQSYAIKISKRLLGRVIDPIGKILD 394


>UniRef50_Q2IQ94 Cluster: Sodium-transporting two-sector ATPase;
           n=3; Bacteria|Rep: Sodium-transporting two-sector ATPase
           - Anaeromyxobacter dehalogenans (strain 2CP-C)
          Length = 475

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
 Frame = +2

Query: 299 GMALNLEPDNVGVVVFGNDK-LIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKG 475
           G  + L  D + V V    + L      V  TG +  + V   +LGRV+D LG P DG  
Sbjct: 51  GQVIALSRDRIAVQVLEETRGLAPARSEVTLTGQVARLGVARGMLGRVLDGLGRPADGLP 110

Query: 476 P 478
           P
Sbjct: 111 P 111


>UniRef50_A0Z379 Cluster: ATPase FliI/YscN; n=1; marine gamma
           proteobacterium HTCC2080|Rep: ATPase FliI/YscN - marine
           gamma proteobacterium HTCC2080
          Length = 477

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 17/52 (32%), Positives = 29/52 (55%)
 Frame = +2

Query: 323 DNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGP 478
           D + ++  G+ + ++ G  V+       +PVG  +LGRV+D  G P+DG  P
Sbjct: 76  DRLVMMCEGSAEGLRPGARVEPLEGSDRIPVGPGLLGRVIDGAGRPLDGFSP 127



 Score = 35.1 bits (77), Expect = 1.8
 Identities = 17/54 (31%), Positives = 32/54 (59%)
 Frame = +1

Query: 490 IPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           +P +G    P+   R ++++P+  GI+A++SL+ + RGQR  +      GK+ L
Sbjct: 134 VPMQGEPLNPM--DRGALQKPLDVGIRAINSLLTVARGQRIGLFAGSGVGKSTL 185


>UniRef50_Q8ZXR2 Cluster: V-type ATP synthase beta chain; n=5;
           Archaea|Rep: V-type ATP synthase beta chain -
           Pyrobaculum aerophilum
          Length = 467

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = +2

Query: 329 VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 466
           V  V+ G   L  +G  V+  G  + +PV EQ++GR++D  G P D
Sbjct: 56  VAQVLGGTLGLPAKGSTVRFYGKTLKIPVSEQLIGRILDGKGQPRD 101


>UniRef50_A3ZQF8 Cluster: Transcription termination factor Rho; n=2;
           Planctomycetaceae|Rep: Transcription termination factor
           Rho - Blastopirellula marina DSM 3645
          Length = 444

 Score = 35.1 bits (77), Expect = 1.8
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = +1

Query: 568 KAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           + VD L P+G+GQR L++   +TGKT L
Sbjct: 181 RIVDLLTPLGKGQRALVVAPPRTGKTML 208


>UniRef50_A7DBR8 Cluster: Transport system permease protein; n=3;
           Proteobacteria|Rep: Transport system permease protein -
           Methylobacterium extorquens PA1
          Length = 896

 Score = 34.7 bits (76), Expect = 2.4
 Identities = 19/46 (41%), Positives = 26/46 (56%)
 Frame = +3

Query: 132 AAEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKTSRLR 269
           A +I+ IL    LG AP   L     ++S+GD  AR  G++T RLR
Sbjct: 755 AGDIAAILPAMALGLAPLVLLRWRVNLMSLGDEEARALGVETRRLR 800


>UniRef50_Q25691 Cluster: Vacuolar ATP synthase subunit B; n=25;
           Eukaryota|Rep: Vacuolar ATP synthase subunit B -
           Plasmodium falciparum
          Length = 494

 Score = 34.7 bits (76), Expect = 2.4
 Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
 Frame = +2

Query: 296 KGMALNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 472
           +G  L +      + VF G   +  +   V+ +G I+ +P+ +++LGRV +  G PID K
Sbjct: 68  QGQILEVCGKKAVIQVFEGTSGIDNKNSYVEVSGDILKMPMSDEMLGRVFNGSGKPID-K 126

Query: 473 GP 478
           GP
Sbjct: 127 GP 128


>UniRef50_P45835 Cluster: Transcription termination factor rho;
           n=87; Bacteria|Rep: Transcription termination factor rho
           - Mycobacterium leprae
          Length = 610

 Score = 34.7 bits (76), Expect = 2.4
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +1

Query: 550 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAID 660
           P +   + +D ++PIG+GQR LI+   + GKT +  D
Sbjct: 337 PDRLTTRVIDLIMPIGKGQRALIVSPPKAGKTTILQD 373


>UniRef50_Q4RR34 Cluster: Chromosome 14 SCAF15003, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 14 SCAF15003, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 590

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +1

Query: 496 YEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           + G      I+ R+S + P    +   D  + IG+G   L++G+  TGKT+L
Sbjct: 366 HAGPVDTAFIVDRLSYKSPFADELLVEDLSLRIGQGAHVLVVGNTGTGKTSL 417


>UniRef50_Q8NR58 Cluster: Transcription termination factor; n=3;
           Corynebacterium|Rep: Transcription termination factor -
           Corynebacterium glutamicum (Brevibacterium flavum)
          Length = 762

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +1

Query: 568 KAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGE 696
           + +D ++PIG+GQR LI+   + GKT + +  I N    N  E
Sbjct: 490 RVIDLIMPIGKGQRALIVSPPKAGKTTI-LQNIANAISTNNPE 531


>UniRef50_A7CZI2 Cluster: H+transporting two-sector ATPase
           alpha/beta subunit central region; n=1; Opitutaceae
           bacterium TAV2|Rep: H+transporting two-sector ATPase
           alpha/beta subunit central region - Opitutaceae
           bacterium TAV2
          Length = 403

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +1

Query: 568 KAVDSLVPIGRGQRELIIGDRQTGKTALAID 660
           +AVD   P+G+G R LI+   +TGKT L  D
Sbjct: 146 RAVDLFCPVGKGTRGLIVAPPRTGKTTLLRD 176


>UniRef50_A1EBU5 Cluster: SctN; n=1; Lysobacter enzymogenes|Rep:
           SctN - Lysobacter enzymogenes
          Length = 450

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = +2

Query: 389 TGAIVDVPVGEQILGRVVDALGNPIDGKG 475
           TG    V  GE +LGR++DA G+ IDG+G
Sbjct: 102 TGRQASVRCGEGLLGRILDANGDAIDGRG 130


>UniRef50_Q9PK86 Cluster: V-type ATP synthase beta chain; n=19;
           Bacteria|Rep: V-type ATP synthase beta chain - Chlamydia
           muridarum
          Length = 438

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = +2

Query: 308 LNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 472
           L  +   V + VFG    +  GD V   G  ++V  G+ +LGR  +  G PID +
Sbjct: 44  LRFDAKKVTLQVFGGTSGLSTGDKVVFLGRPMEVVYGDSLLGRRFNGTGKPIDNE 98


>UniRef50_P52157 Cluster: Transcription termination factor rho;
           n=14; Bacteria|Rep: Transcription termination factor rho
           - Streptomyces lividans
          Length = 707

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 17/43 (39%), Positives = 25/43 (58%)
 Frame = +1

Query: 568 KAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGE 696
           + +D + PIG+GQR LI+   +TGKT + +  I N    N  E
Sbjct: 440 RIIDLVAPIGKGQRGLIVAPPKTGKT-MIMQAIANAITHNNPE 481


>UniRef50_O67031 Cluster: Transcription termination factor rho;
           n=251; Bacteria|Rep: Transcription termination factor
           rho - Aquifex aeolicus
          Length = 436

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 547 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           +P +   + V  + PIG+GQR LI+   + GKT L
Sbjct: 169 DPNELSTRVVSLIAPIGKGQRGLIVAPPKAGKTVL 203


>UniRef50_Q08637 Cluster: V-type sodium ATP synthase subunit B (EC
           3.6.3.15) (Na(+)- translocating ATPase subunit B); n=14;
           cellular organisms|Rep: V-type sodium ATP synthase
           subunit B (EC 3.6.3.15) (Na(+)- translocating ATPase
           subunit B) - Enterococcus hirae
          Length = 458

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
 Frame = +2

Query: 257 IQAEEMVE--FSSG--LKGMALNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGE 421
           ++ EE++E    +G   +G  L ++ D   V +F G   +  +   V+  G  + + V E
Sbjct: 24  VKYEELIEVRMQNGEIRRGQVLEVQEDKAMVQIFEGTSGINLKNSSVRFLGHPLQLGVSE 83

Query: 422 QILGRVVDALGNPIDGKGP 478
            ++GRV D LG P D  GP
Sbjct: 84  DMIGRVFDGLGRPKD-NGP 101


>UniRef50_Q52371 Cluster: Type III secretion ATP synthase hrcN;
           n=18; Pseudomonas|Rep: Type III secretion ATP synthase
           hrcN - Pseudomonas syringae pv. syringae
          Length = 449

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
 Frame = +1

Query: 448 FGKPY*WQGTNRHEIPYEGRFKAPII---IP---RVSVREPMQTGIKAVDSLVPIGRGQR 609
           FG+P           P + R   P+I   +P   R  +   + TGI+A+DS + +G GQR
Sbjct: 111 FGRPLMGDCLGAFAGPEDRRTTLPVIADALPPTQRPRITRALPTGIRAIDSAILLGEGQR 170

Query: 610 ELIIGDRQTGKTALAIDTIIN 672
             +      GKT L  +   N
Sbjct: 171 VGLFAGAGCGKTTLMAELARN 191


>UniRef50_P26465 Cluster: Flagellum-specific ATP synthase; n=258;
           cellular organisms|Rep: Flagellum-specific ATP synthase
           - Salmonella typhimurium
          Length = 456

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 13/42 (30%), Positives = 25/42 (59%)
 Frame = +1

Query: 526 IPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           + R  +   + TG++A+++L+ +GRGQR  +      GK+ L
Sbjct: 150 LQRTPIEHVLDTGVRAINALLTVGRGQRMGLFAGSGVGKSVL 191


>UniRef50_UPI00005F655A Cluster: COG1157: Flagellar
           biosynthesis/type III secretory pathway ATPase; n=1;
           Yersinia pestis Angola|Rep: COG1157: Flagellar
           biosynthesis/type III secretory pathway ATPase -
           Yersinia pestis Angola
          Length = 389

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = +2

Query: 413 VGEQILGRVVDALGNPIDGKGPI 481
           +G+  LGRV++ LG P+DGKG +
Sbjct: 97  IGDSWLGRVINGLGEPLDGKGQL 119



 Score = 33.5 bits (73), Expect = 5.5
 Identities = 18/67 (26%), Positives = 33/67 (49%)
 Frame = +1

Query: 451 GKPY*WQGTNRHEIPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDR 630
           G+P   +G      P + +      + R +V  P+  G+ A++ L+ IG+GQR  ++   
Sbjct: 110 GEPLDGKGQLGGSTPLQQQLPQIHPLQRRAVDTPLDVGVNAINGLLTIGKGQRVGLMAGS 169

Query: 631 QTGKTAL 651
             GK+ L
Sbjct: 170 GVGKSVL 176


>UniRef50_Q9MTQ2 Cluster: ATP synthase subunit beta; n=2;
           Amphidinium|Rep: ATP synthase subunit beta - Amphidinium
           operculatum (Dinoflagellate)
          Length = 548

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +1

Query: 535 VSVREPM-QTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIIN 672
           + +  P+ +TGIK VD L P  +G +  + G    GKT L ++ I N
Sbjct: 201 IDITAPLFETGIKVVDVLTPYKKGGKVGLFGGAGVGKTVLIMELIRN 247


>UniRef50_A6RD01 Cluster: Putative uncharacterized protein; n=1;
           Ajellomyces capsulatus NAm1|Rep: Putative
           uncharacterized protein - Ajellomyces capsulatus NAm1
          Length = 762

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 22/67 (32%), Positives = 32/67 (47%)
 Frame = +1

Query: 538 SVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLY 717
           S RE  Q  +      VP    Q   I G  Q G   +A D I+NQQRF+ G++  + L 
Sbjct: 614 STREAHQLHLNVERIRVPETVFQPSAIAGLDQAGLVEIAAD-IVNQQRFSSGQERARLLR 672

Query: 718 CIYVVIG 738
            +++  G
Sbjct: 673 DVFITGG 679


>UniRef50_Q141X8 Cluster: ATPase FliI/YscN; n=1; Burkholderia
           xenovorans LB400|Rep: ATPase FliI/YscN - Burkholderia
           xenovorans (strain LB400)
          Length = 444

 Score = 33.5 bits (73), Expect = 5.5
 Identities = 14/19 (73%), Positives = 17/19 (89%)
 Frame = +2

Query: 425 ILGRVVDALGNPIDGKGPI 481
           +LGRVVD LGNP+DG GP+
Sbjct: 102 LLGRVVDGLGNPLDG-GPV 119


>UniRef50_A6VWI3 Cluster: H+transporting two-sector ATPase
           alpha/beta subunit central region; n=4;
           Gammaproteobacteria|Rep: H+transporting two-sector
           ATPase alpha/beta subunit central region - Marinomonas
           sp. MWYL1
          Length = 318

 Score = 33.5 bits (73), Expect = 5.5
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +1

Query: 556 QTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           Q  ++A+D + PIG GQR LI+    +GKT +
Sbjct: 55  QRTVRAMDLITPIGMGQRGLIVAPPGSGKTTM 86


>UniRef50_A3SFS3 Cluster: Flagellum-specific ATP synthase; n=2;
           Sulfitobacter|Rep: Flagellum-specific ATP synthase -
           Sulfitobacter sp. EE-36
          Length = 463

 Score = 33.5 bits (73), Expect = 5.5
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +1

Query: 505 RFKA--PIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           RF+A  P    R  V E ++T IK +D   PI RGQR  +      GK+ +
Sbjct: 126 RFRANPPGAFDRKKVGEKLETQIKCIDIFTPICRGQRMGVFAGSGVGKSTM 176


>UniRef50_A1T0I0 Cluster: ATPase, FliI/YscN family protein; n=1;
           Psychromonas ingrahamii 37|Rep: ATPase, FliI/YscN family
           protein - Psychromonas ingrahamii (strain 37)
          Length = 436

 Score = 33.5 bits (73), Expect = 5.5
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = +1

Query: 523 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           I+ +  + EP   GIK+++ L+ + +GQR  ++     GK+ L
Sbjct: 129 ILKKKPISEPFDVGIKSINGLLTLAKGQRVGLVAGSGVGKSVL 171


>UniRef50_Q85X23 Cluster: ORF56b; n=1; Pinus koraiensis|Rep: ORF56b
           - Pinus koraiensis (Korean pine)
          Length = 56

 Score = 33.5 bits (73), Expect = 5.5
 Identities = 16/32 (50%), Positives = 18/32 (56%)
 Frame = -1

Query: 483 SIGPLPSIGFPKASTTRPRICSPTGTSTIAPV 388
           S GP  S G P+    RPR+  PTGT   APV
Sbjct: 4   STGPKLSTGSPRTLKIRPRVAPPTGTLRGAPV 35


>UniRef50_A5B5Q4 Cluster: Putative uncharacterized protein; n=1; Vitis
            vinifera|Rep: Putative uncharacterized protein - Vitis
            vinifera (Grape)
          Length = 1855

 Score = 33.5 bits (73), Expect = 5.5
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +1

Query: 52   LLPRCQRWRYPQWPWHLANYMSQPPTKLPRSPPSSKRGSLEP 177
            L+ R  RW YP +PW L++Y S+    L  + PSS R   +P
Sbjct: 1567 LMERWARWEYPVFPWILSDYSSK---YLDLADPSSYRDLSKP 1605


>UniRef50_UPI00015B4CD4 Cluster: PREDICTED: similar to
           ENSANGP00000024697; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to ENSANGP00000024697 - Nasonia
           vitripennis
          Length = 1018

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 15/57 (26%), Positives = 29/57 (50%)
 Frame = +2

Query: 293 LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPI 463
           L G  + L  D+  + V+ +   +  GD V+RTG  + + +   +LG + D +  P+
Sbjct: 449 LLGEVIRLNGDSATIQVYEDTSGLAVGDPVRRTGRPLSIELAPGLLGSIFDGIQRPL 505


>UniRef50_Q8A876 Cluster: V-type ATP synthase subunit B; n=9;
           Bacteroidales|Rep: V-type ATP synthase subunit B -
           Bacteroides thetaiotaomicron
          Length = 441

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 22/74 (29%), Positives = 34/74 (45%)
 Frame = +2

Query: 287 SGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 466
           +G     + +  D+V + VF   + I     V   G    + V EQ+ GR  +A G+PID
Sbjct: 37  NGKLAQVVKIAGDDVTLQVFEGTEGIPTNAEVVFLGKSPTLKVSEQLAGRFFNAFGDPID 96

Query: 467 GKGPIDTKSRMRVG 508
           G GP      + +G
Sbjct: 97  G-GPEIEGQEVEIG 109


>UniRef50_Q81SH1 Cluster: Flagellum-specific ATP synthase, putative;
           n=20; Bacillales|Rep: Flagellum-specific ATP synthase,
           putative - Bacillus anthracis
          Length = 434

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +1

Query: 532 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           R  + +  +TGIK++DS++ IG GQ+  I      GK+ L
Sbjct: 135 REEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKSTL 174


>UniRef50_Q5LWX0 Cluster: H+-transporting two-sector ATPase,
           flagellum-specific; n=17; Rhodobacteraceae|Rep:
           H+-transporting two-sector ATPase, flagellum-specific -
           Silicibacter pomeroyi
          Length = 445

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = +1

Query: 517 PIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           P  + R  + + M TG+ A+++L+PI RGQR  +      GK++L
Sbjct: 132 PPAVQRKPLGQRMATGLAALNTLLPIVRGQRVGLFAGSGVGKSSL 176


>UniRef50_Q2SEY6 Cluster: Flagellum-specific ATP synthase; n=1;
           Hahella chejuensis KCTC 2396|Rep: Flagellum-specific ATP
           synthase - Hahella chejuensis (strain KCTC 2396)
          Length = 416

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +2

Query: 362 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDG 469
           I  G  V  TG    V V + +LG+VV+A G P+DG
Sbjct: 56  IHVGSEVVATGLPASVTVNDGMLGKVVNAFGTPLDG 91


>UniRef50_Q2S040 Cluster: Transcription termination factor rho; n=1;
           Salinibacter ruber DSM 13855|Rep: Transcription
           termination factor rho - Salinibacter ruber (strain DSM
           13855)
          Length = 373

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +1

Query: 565 IKAVDSLVPIGRGQRELIIGDRQTGKTALAID 660
           ++ +D + P+G+GQR LI+   + GKT L  D
Sbjct: 113 MRVLDLVAPLGKGQRALIVSPPRAGKTVLLKD 144


>UniRef50_Q9F696 Cluster: Flagella-specific ATPase; n=16;
           Alphaproteobacteria|Rep: Flagella-specific ATPase -
           Bartonella bacilliformis
          Length = 315

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = +1

Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690
           AP  + R  V   ++TG+K +D   P+  GQR  I      GK+ L +  ++    F+K
Sbjct: 7   APPALARARVGNGLRTGVKVIDIFTPLCFGQRIGIFSGSGVGKSTL-LSMMMQADHFDK 64


>UniRef50_Q1AVG2 Cluster: Transcription termination factor Rho; n=1;
           Rubrobacter xylanophilus DSM 9941|Rep: Transcription
           termination factor Rho - Rubrobacter xylanophilus
           (strain DSM 9941 / NBRC 16129)
          Length = 498

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +1

Query: 547 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           +P     + +D + PIG+GQR LI+   + GKT +
Sbjct: 229 KPNDIAPRVIDLVAPIGKGQRGLIVSPPKAGKTTI 263


>UniRef50_A4M4Z8 Cluster: Putative uncharacterized protein; n=1;
           Geobacter bemidjiensis Bem|Rep: Putative uncharacterized
           protein - Geobacter bemidjiensis Bem
          Length = 519

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 21/75 (28%), Positives = 36/75 (48%)
 Frame = -3

Query: 493 GFRVDWSLAINRVSQSVYYTPKDLLSDGNVYDSTSTLDNISFFDKLVITKYYHTHIVRFQ 314
           G  VD + AI+RV+  V +      +  N+ D     D ++F D   + +     +V  +
Sbjct: 388 GVGVDRAEAIDRVTDRVDHAADQGRAYRNLDDLAGQFDRVAFLDLGELAEDRRADVVFLE 447

Query: 313 VKGHSLEA*GELHHL 269
           V+ H+ +A GEL  L
Sbjct: 448 VQNHAGDAAGELEEL 462


>UniRef50_A2WHW2 Cluster: Flagellar biosynthesis/type III secretory
           pathway ATPase; n=3; Proteobacteria|Rep: Flagellar
           biosynthesis/type III secretory pathway ATPase -
           Burkholderia dolosa AUO158
          Length = 476

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
 Frame = +2

Query: 263 AEEMVEFSSG--LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGR 436
           A   +E +SG  +    +    D   ++ F     +  G  V   GA   + +G    GR
Sbjct: 83  ANARIETASGEWIDARVVGFRDDVTQLMPFRAPAGLFAGARVMPAGAGRQLTIGAAWRGR 142

Query: 437 VVDALGNPIDGKGPI 481
           +VD +G P DG GP+
Sbjct: 143 IVDGMGEPFDGGGPL 157


>UniRef50_A7PWU3 Cluster: Chromosome chr19 scaffold_35, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr19 scaffold_35, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 126

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = -1

Query: 486 VSIGPLPSIGFPKASTTRPRICSPTGTSTIAPV 388
           VS GP  S G P     RPR+  PTGT   AP+
Sbjct: 46  VSTGPKLSTGSPSTLKIRPRVAPPTGTLRGAPL 78


>UniRef50_Q5CS50 Cluster: Putative uncharacterized protein; n=2;
           Cryptosporidium|Rep: Putative uncharacterized protein -
           Cryptosporidium parvum Iowa II
          Length = 856

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +2

Query: 416 GEQILGRVVDALGNPIDGKGPIDTKSRMRV 505
           GE ++  + D LGN IDG+ P  TKS++R+
Sbjct: 135 GESVVRGINDNLGNNIDGRTPQTTKSQVRI 164


>UniRef50_Q98QX4 Cluster: ATP SYNTHASE BETA CHAIN; n=1; Mycoplasma
           pulmonis|Rep: ATP SYNTHASE BETA CHAIN - Mycoplasma
           pulmonis
          Length = 698

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = +1

Query: 553 MQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIIN 672
           ++TGIK +D L+PI  G +  ++G    GKT + +  +IN
Sbjct: 341 LETGIKVIDVLLPIPSGGKTGLLGGAGVGKT-VVVQELIN 379


>UniRef50_Q7URK7 Cluster: Excinuclease ABC subunit A; n=1; Pirellula
           sp.|Rep: Excinuclease ABC subunit A - Rhodopirellula
           baltica
          Length = 1031

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 20/52 (38%), Positives = 30/52 (57%)
 Frame = +1

Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTI 666
           K P+    +SVR      ++ VD  V I RG+  +I G   +GKT+LA+DT+
Sbjct: 40  KTPVTRQPISVRGCRVHNLRDVD--VDIPRGELVVICGLSGSGKTSLALDTL 89


>UniRef50_Q3IUV2 Cluster: TraG; n=1; Rhodobacter sphaeroides
           2.4.1|Rep: TraG - Rhodobacter sphaeroides (strain ATCC
           17023 / 2.4.1 / NCIB 8253 / DSM158)
          Length = 1136

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
 Frame = +2

Query: 263 AEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVK-RTGAIVDVPVGEQILGRV 439
           +E      SG   + +NL       +V G    ++  D    +TGA +    G+QI+GRV
Sbjct: 739 SEAESRLKSGGTSLDMNLNQMIGNELVRGGHNPLEVSDFFNPKTGAAMGE--GKQIVGRV 796

Query: 440 VDALGNPIDGKGPID 484
           VD L N + G GP D
Sbjct: 797 VDDLVNGLVGPGPQD 811


>UniRef50_Q2S0E2 Cluster: Transcription termination factor Rho; n=1;
           Salinibacter ruber DSM 13855|Rep: Transcription
           termination factor Rho - Salinibacter ruber (strain DSM
           13855)
          Length = 472

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +1

Query: 562 GIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           G + +D   PIG+GQR LI+   + GKT L
Sbjct: 213 GPRILDLFAPIGKGQRGLIVSPPKAGKTVL 242


>UniRef50_Q2RXS1 Cluster: Putative uncharacterized protein
           precursor; n=1; Rhodospirillum rubrum ATCC 11170|Rep:
           Putative uncharacterized protein precursor -
           Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255)
          Length = 293

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 19/59 (32%), Positives = 28/59 (47%)
 Frame = +1

Query: 520 IIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGE 696
           I+  RVSV  P QTG  A D+L      + E+II D        + +T++      KG+
Sbjct: 235 ILSARVSVDPPTQTGSDAEDALAATRERRVEMIIEDAAVANGPSSDETVVGATLMAKGD 293


>UniRef50_A6VUA3 Cluster: Positive regulator of sigma E, RseC/MucC;
           n=2; Marinomonas|Rep: Positive regulator of sigma E,
           RseC/MucC - Marinomonas sp. MWYL1
          Length = 155

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = +3

Query: 192 LEETGRVLSIGDGIARVYGLKTS 260
           +EETGRVLSI DG A V  ++TS
Sbjct: 2   IEETGRVLSIEDGFANVETIRTS 24


>UniRef50_A6Q2N1 Cluster: Flagellar-specific ATP synthase FliI; n=1;
           Nitratiruptor sp. SB155-2|Rep: Flagellar-specific ATP
           synthase FliI - Nitratiruptor sp. (strain SB155-2)
          Length = 431

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
 Frame = +1

Query: 478 NRHEIPYEGR--FKAPIIIP--RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKT 645
           N+ ++ +E +   K   I P  R  ++ P+  G+++++ L  IG+GQR  I      GK+
Sbjct: 97  NKEKLQFETKVSLKNETINPLLRERIKTPLDIGVRSINGLFTIGKGQRIGIFASAGVGKS 156

Query: 646 AL 651
            L
Sbjct: 157 TL 158


>UniRef50_A5GCR1 Cluster: H+-transporting two-sector ATPase,
           alpha/beta subunit, central region; n=1; Geobacter
           uraniumreducens Rf4|Rep: H+-transporting two-sector
           ATPase, alpha/beta subunit, central region - Geobacter
           uraniumreducens Rf4
          Length = 524

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = +1

Query: 550 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           P+ TG +AVD L P+ RG   +  G   TGKT L
Sbjct: 187 PLVTGQRAVDFLFPLARGGAAVFPGGFGTGKTVL 220


>UniRef50_A2BND1 Cluster: DNA gyrase/topoisomerase IV, subunit A;
           n=5; Prochlorococcus marinus|Rep: DNA
           gyrase/topoisomerase IV, subunit A - Prochlorococcus
           marinus (strain AS9601)
          Length = 813

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
 Frame = +2

Query: 284 SSGLK-GMALNLEPDNVGVVVFGNDKLIKEGDIV-KRTGAIV---DVPV-GEQILGRVVD 445
           S+G+  GMA N+ P N+G +V G   L+K  DI  K+   I+   D P  GE I  R ++
Sbjct: 170 STGIAVGMATNIPPHNLGEIVDGLVTLVKNKDISDKKLFNIIKGPDFPTGGELIYSRAIE 229

Query: 446 ALGNPIDGKGPI 481
            L     GKG I
Sbjct: 230 ELYQ--TGKGSI 239


>UniRef50_A2F8P6 Cluster: ABC transporter family protein; n=1;
           Trichomonas vaginalis G3|Rep: ABC transporter family
           protein - Trichomonas vaginalis G3
          Length = 536

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 17/30 (56%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +1

Query: 565 IKAVDSL-VPIGRGQRELIIGDRQTGKTAL 651
           IKA+DSL   +GRG+  LIIG   +GKT L
Sbjct: 232 IKAIDSLDFTVGRGETILIIGPNGSGKTTL 261


>UniRef50_Q4PCL5 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 867

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
 Frame = +1

Query: 487 EIPYEGRFKAPII-IPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDT 663
           E P   RF   ++ +  VSVR    TG    D  + IG G+R  I+G    GKT L +  
Sbjct: 604 EDPEASRFPGSLVHLEGVSVRYDGNTGYTINDIGLTIGPGERVGIVGPNGHGKTTL-LHC 662

Query: 664 IINQQRFNKGEDEK 705
           I+ +    KG  E+
Sbjct: 663 IVGKLTPTKGTVER 676


>UniRef50_O94034 Cluster: Nucleotide phosphodiesterase; n=4;
           Saccharomycetales|Rep: Nucleotide phosphodiesterase -
           Candida albicans (Yeast)
          Length = 571

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 14/45 (31%), Positives = 29/45 (64%)
 Frame = -3

Query: 397 STSTLDNISFFDKLVITKYYHTHIVRFQVKGHSLEA*GELHHLLS 263
           +TS LDN+ F DK ++ +++ TH+    ++G + +  G+L+  +S
Sbjct: 75  NTSKLDNLPFSDKSLLIQFFFTHLNILMIQGENSDE-GKLYQEIS 118


>UniRef50_O83541 Cluster: V-type ATP synthase alpha chain 2; n=7;
           Bacteria|Rep: V-type ATP synthase alpha chain 2 -
           Treponema pallidum
          Length = 605

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +1

Query: 532 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKT 645
           +++V EP+ TG +A+D   P+ +G    I G   TGKT
Sbjct: 212 KLAVCEPLVTGQRAIDVFFPLSKGGTAAIPGGFGTGKT 249


>UniRef50_Q92HL2 Cluster: Transcription termination factor rho;
           n=164; cellular organisms|Rep: Transcription termination
           factor rho - Rickettsia conorii
          Length = 458

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = +1

Query: 568 KAVDSLVPIGRGQRELIIGDRQTGKTAL 651
           + ++ + P+G+GQR LI+   +TGKT L
Sbjct: 192 RVIELVAPMGKGQRALIVAPPRTGKTVL 219


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 779,183,803
Number of Sequences: 1657284
Number of extensions: 16998600
Number of successful extensions: 58936
Number of sequences better than 10.0: 162
Number of HSP's better than 10.0 without gapping: 54743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58792
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -