BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= heS00252 (738 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_P25705 Cluster: ATP synthase subunit alpha, mitochondri... 163 5e-39 UniRef50_P35381 Cluster: ATP synthase subunit alpha, mitochondri... 159 7e-38 UniRef50_A0D564 Cluster: ATP synthase subunit alpha; n=1; Parame... 137 2e-31 UniRef50_Q35058 Cluster: AtpA intron2 ORF; n=8; Embryophyta|Rep:... 129 8e-29 UniRef50_UPI00005A408F Cluster: PREDICTED: similar to ATP syntha... 125 1e-27 UniRef50_Q5FRC7 Cluster: ATP synthase subunit alpha 1; n=100; ce... 118 2e-25 UniRef50_Q29596 Cluster: ATP synthase subunit alpha liver isofor... 112 1e-23 UniRef50_P45825 Cluster: ATP synthase subunit alpha; n=47; Bacte... 105 1e-21 UniRef50_Q6A8C5 Cluster: ATP synthase subunit alpha; n=2; Bacter... 102 8e-21 UniRef50_A3FPS2 Cluster: ATP synthase subunit alpha; n=2; Crypto... 101 2e-20 UniRef50_Q0SGP7 Cluster: ATP synthase subunit alpha; n=17; cellu... 97 5e-19 UniRef50_O50140 Cluster: ATP synthase subunit alpha; n=2; Firmic... 96 9e-19 UniRef50_A6PZL5 Cluster: ATP synthase subunit alpha; n=4; Leucon... 93 9e-18 UniRef50_Q9PR12 Cluster: ATP synthase subunit alpha; n=1037; cel... 92 1e-17 UniRef50_Q9AHX2 Cluster: ATP synthase alpha subunit; n=10; Candi... 90 5e-17 UniRef50_Q21Z99 Cluster: ATP synthase subunit alpha 2; n=22; cel... 90 6e-17 UniRef50_Q4QJF1 Cluster: ATPase alpha subunit; n=9; Trypanosomat... 88 2e-16 UniRef50_A3JAC3 Cluster: F0F1 ATP synthase subunit alpha; n=3; P... 81 2e-14 UniRef50_Q9BBC2 Cluster: ATPase CF1 alpha subunit; n=4; Dinophyc... 81 2e-14 UniRef50_Q62EB0 Cluster: ATP synthase subunit alpha 2; n=25; Pro... 81 2e-14 UniRef50_Q9TAH9 Cluster: ATP synthase subunit alpha; n=1; Cafete... 81 4e-14 UniRef50_Q92FH0 Cluster: ATP synthase subunit alpha 1; n=13; Lis... 78 2e-13 UniRef50_Q1PVR1 Cluster: Strongly similar to ATPA gene encoding ... 77 6e-13 UniRef50_Q6KHZ3 Cluster: ATP synthase alpha chain; n=1; Mycoplas... 76 1e-12 UniRef50_Q603U2 Cluster: ATP synthase subunit alpha 2; n=6; Prot... 76 1e-12 UniRef50_Q9G8S6 Cluster: ATP synthase F1 subunit alpha; n=1; Nae... 73 6e-12 UniRef50_UPI0000EB1FE1 Cluster: UPI0000EB1FE1 related cluster; n... 71 2e-11 UniRef50_A5IY82 Cluster: ATP synthase alpha chain; n=6; Mycoplas... 71 2e-11 UniRef50_Q98QX5 Cluster: ATP SYNTHASE ALPHA CHAIN; n=2; Mycoplas... 70 7e-11 UniRef50_Q4A6P2 Cluster: ATP synthase alpha chain; n=2; Mycoplas... 70 7e-11 UniRef50_Q98QB7 Cluster: ATP synthase subunit alpha 2; n=1; Myco... 69 9e-11 UniRef50_Q98PM2 Cluster: ATP SYNTHASE ALPHA CHAIN; n=1; Mycoplas... 69 1e-10 UniRef50_Q9XXK1-2 Cluster: Isoform b of Q9XXK1 ; n=1; Caenorhabd... 68 3e-10 UniRef50_Q600H8 Cluster: ATP synthase alpha chain; n=3; Mycoplas... 66 1e-09 UniRef50_Q2F981 Cluster: Ribosomal protein S2; n=3; Oryza sativa... 64 3e-09 UniRef50_A0VM48 Cluster: Putative uncharacterized protein; n=3; ... 62 1e-08 UniRef50_A7DHD0 Cluster: Putative uncharacterized protein; n=2; ... 56 7e-07 UniRef50_A3L181 Cluster: ATP synthase beta chain; n=3; Gammaprot... 55 2e-06 UniRef50_Q8R9Z1 Cluster: Flagellar biosynthesis/type III secreto... 54 5e-06 UniRef50_A0NUS5 Cluster: Putative uncharacterized protein; n=1; ... 54 5e-06 UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondria... 51 3e-05 UniRef50_Q01D41 Cluster: ATP synthase alpha chain, sodium ion sp... 50 6e-05 UniRef50_Q93UD9 Cluster: ATP synthase beta subunit; n=12; Candid... 50 8e-05 UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellul... 49 1e-04 UniRef50_Q67K17 Cluster: Flagellar-specific ATP synthase; n=1; S... 48 2e-04 UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondria... 48 2e-04 UniRef50_P38168 Cluster: Putative uncharacterized protein YBL100... 47 4e-04 UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellu... 47 4e-04 UniRef50_Q6BRW4 Cluster: Debaryomyces hansenii chromosome D of s... 47 6e-04 UniRef50_Q98PM3 Cluster: ATP SYNTHASE BETA CHAIN; n=9; Mycoplasm... 46 7e-04 UniRef50_Q9RQ79 Cluster: Beta subunit of membrane-bound ATP synt... 46 7e-04 UniRef50_A5KSP4 Cluster: Sodium-transporting two-sector ATPase; ... 46 7e-04 UniRef50_A3IIS5 Cluster: Putative uncharacterized protein; n=1; ... 46 7e-04 UniRef50_A6DUD8 Cluster: F0F1 ATP synthase subunit beta; n=1; Le... 46 0.001 UniRef50_Q1GNY4 Cluster: ATPase FliI/YscN; n=6; Bacteria|Rep: AT... 45 0.002 UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondr... 45 0.002 UniRef50_Q1IR49 Cluster: ATPase FliI/YscN; n=1; Acidobacteria ba... 44 0.003 UniRef50_O83417 Cluster: Flagellum-specific ATP synthase; n=42; ... 44 0.003 UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellu... 44 0.003 UniRef50_Q1NYL2 Cluster: ATP synthase beta chain; n=1; Candidatu... 44 0.004 UniRef50_Q12T73 Cluster: ATPase FliI/YscN; n=1; Shewanella denit... 44 0.005 UniRef50_Q9RQ76 Cluster: Beta subunit of membrane-bound ATP synt... 43 0.009 UniRef50_Q6D5F7 Cluster: Type III secretion protein; n=10; Enter... 42 0.012 UniRef50_Q02C61 Cluster: ATPase, FliI/YscN family; n=2; Bacteria... 42 0.012 UniRef50_A7CYE2 Cluster: Flagellar protein export ATPase FliI; n... 42 0.012 UniRef50_P0A1B9 Cluster: Probable ATP synthase spaL; n=32; Prote... 42 0.012 UniRef50_P55717 Cluster: Probable ATP synthase y4yI; n=27; Bacte... 42 0.016 UniRef50_A5D0F3 Cluster: Flagellar biosynthesis/type III secreto... 41 0.028 UniRef50_Q971B7 Cluster: V-type ATP synthase alpha chain; n=11; ... 41 0.036 UniRef50_Q8F319 Cluster: Flagellum-specific ATP synthase fliI; n... 40 0.048 UniRef50_Q7UIJ0 Cluster: Flagellum-specific ATP synthase; n=3; P... 40 0.048 UniRef50_O07025 Cluster: Flagellum-specific ATP synthase; n=24; ... 40 0.048 UniRef50_P23445 Cluster: Flagellum-specific ATP synthase; n=18; ... 40 0.048 UniRef50_A3WGS0 Cluster: FliI, Flagellum-specific ATPase; n=2; E... 40 0.064 UniRef50_A6CBM4 Cluster: Transcription termination factor Rho; n... 40 0.084 UniRef50_Q4IW70 Cluster: ATP synthase F1, beta subunit; n=1; Azo... 39 0.11 UniRef50_A5IFJ3 Cluster: ATP synthase F1, beta chain; n=3; Legio... 39 0.11 UniRef50_A7R4X8 Cluster: Chromosome undetermined scaffold_808, w... 39 0.11 UniRef50_O67531 Cluster: Flagellum-specific ATP synthase; n=2; A... 39 0.11 UniRef50_A2WHU5 Cluster: Flagellar biosynthesis/type III secreto... 39 0.15 UniRef50_Q9PLK9 Cluster: Virulence ATPase, putative; n=9; Chlamy... 38 0.19 UniRef50_A6DIN5 Cluster: Transcription termination factor Rho; n... 38 0.19 UniRef50_Q8TUT0 Cluster: V-type ATP synthase beta chain (EC 3.6.... 38 0.19 UniRef50_Q8KKY7 Cluster: Type III secretion system ATP synthase ... 38 0.26 UniRef50_A1SEP6 Cluster: ATPase, FliI/YscN family; n=10; Bacteri... 38 0.26 UniRef50_P74857 Cluster: Probable secretion system apparatus ATP... 38 0.26 UniRef50_Q53153 Cluster: FliI protein; n=7; Rhodobacteraceae|Rep... 38 0.34 UniRef50_Q1FJZ5 Cluster: Transcription termination factor Rho; n... 38 0.34 UniRef50_A2W3Z6 Cluster: ATPase FliI/YscN; n=1; Burkholderia cen... 38 0.34 UniRef50_Q5SJE9 Cluster: Transcription termination factor Rho; n... 37 0.45 UniRef50_Q55738 Cluster: DNA gyrase subunit A; n=37; Cyanobacter... 37 0.45 UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellul... 37 0.45 UniRef50_Q74G36 Cluster: Flagellum-specific ATP synthase FliI; n... 37 0.59 UniRef50_Q62EB7 Cluster: ATP synthase F1, beta subunit; n=27; Ba... 37 0.59 UniRef50_A3Z0H3 Cluster: V-type ATPase, A subunit; n=5; Bacteria... 37 0.59 UniRef50_Q98QB6 Cluster: ATP synthase subunit beta 2; n=5; Mycop... 37 0.59 UniRef50_UPI00004D9CFE Cluster: FH1/FH2 domain-containing protei... 36 0.78 UniRef50_Q9FC33 Cluster: Putative transcription terminator facto... 36 0.78 UniRef50_Q058C4 Cluster: Flagellum-specific ATP synthase; n=1; B... 36 0.78 UniRef50_A7M2K2 Cluster: Putative uncharacterized protein; n=1; ... 36 0.78 UniRef50_P52607 Cluster: Flagellum-specific ATP synthase; n=3; B... 36 0.78 UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5; Bactero... 36 0.78 UniRef50_UPI00015B5329 Cluster: PREDICTED: similar to GA14484-PA... 36 1.0 UniRef50_Q8F7C5 Cluster: Transcription termination factor rho; n... 36 1.0 UniRef50_Q0EZL2 Cluster: Flagellum-specific ATP synthase; n=1; M... 36 1.0 UniRef50_P15313 Cluster: Vacuolar ATP synthase subunit B, kidney... 36 1.0 UniRef50_P38606 Cluster: Vacuolar ATP synthase catalytic subunit... 36 1.0 UniRef50_P84582 Cluster: ATP synthase subunit alpha; n=1; Populu... 36 1.0 UniRef50_UPI0000E823B4 Cluster: PREDICTED: similar to vacuolar p... 36 1.4 UniRef50_Q6KIC3 Cluster: ATP synthase beta chain; n=1; Mycoplasm... 36 1.4 UniRef50_Q2IQ94 Cluster: Sodium-transporting two-sector ATPase; ... 36 1.4 UniRef50_A0Z379 Cluster: ATPase FliI/YscN; n=1; marine gamma pro... 36 1.4 UniRef50_Q8ZXR2 Cluster: V-type ATP synthase beta chain; n=5; Ar... 36 1.4 UniRef50_A3ZQF8 Cluster: Transcription termination factor Rho; n... 35 1.8 UniRef50_A7DBR8 Cluster: Transport system permease protein; n=3;... 35 2.4 UniRef50_Q25691 Cluster: Vacuolar ATP synthase subunit B; n=25; ... 35 2.4 UniRef50_P45835 Cluster: Transcription termination factor rho; n... 35 2.4 UniRef50_Q4RR34 Cluster: Chromosome 14 SCAF15003, whole genome s... 34 3.2 UniRef50_Q8NR58 Cluster: Transcription termination factor; n=3; ... 34 3.2 UniRef50_A7CZI2 Cluster: H+transporting two-sector ATPase alpha/... 34 3.2 UniRef50_A1EBU5 Cluster: SctN; n=1; Lysobacter enzymogenes|Rep: ... 34 3.2 UniRef50_Q9PK86 Cluster: V-type ATP synthase beta chain; n=19; B... 34 3.2 UniRef50_P52157 Cluster: Transcription termination factor rho; n... 34 3.2 UniRef50_O67031 Cluster: Transcription termination factor rho; n... 34 3.2 UniRef50_Q08637 Cluster: V-type sodium ATP synthase subunit B (E... 34 3.2 UniRef50_Q52371 Cluster: Type III secretion ATP synthase hrcN; n... 34 3.2 UniRef50_P26465 Cluster: Flagellum-specific ATP synthase; n=258;... 34 3.2 UniRef50_UPI00005F655A Cluster: COG1157: Flagellar biosynthesis/... 34 4.2 UniRef50_Q9MTQ2 Cluster: ATP synthase subunit beta; n=2; Amphidi... 34 4.2 UniRef50_A6RD01 Cluster: Putative uncharacterized protein; n=1; ... 34 4.2 UniRef50_Q141X8 Cluster: ATPase FliI/YscN; n=1; Burkholderia xen... 33 5.5 UniRef50_A6VWI3 Cluster: H+transporting two-sector ATPase alpha/... 33 5.5 UniRef50_A3SFS3 Cluster: Flagellum-specific ATP synthase; n=2; S... 33 5.5 UniRef50_A1T0I0 Cluster: ATPase, FliI/YscN family protein; n=1; ... 33 5.5 UniRef50_Q85X23 Cluster: ORF56b; n=1; Pinus koraiensis|Rep: ORF5... 33 5.5 UniRef50_A5B5Q4 Cluster: Putative uncharacterized protein; n=1; ... 33 5.5 UniRef50_UPI00015B4CD4 Cluster: PREDICTED: similar to ENSANGP000... 33 7.3 UniRef50_Q8A876 Cluster: V-type ATP synthase subunit B; n=9; Bac... 33 7.3 UniRef50_Q81SH1 Cluster: Flagellum-specific ATP synthase, putati... 33 7.3 UniRef50_Q5LWX0 Cluster: H+-transporting two-sector ATPase, flag... 33 7.3 UniRef50_Q2SEY6 Cluster: Flagellum-specific ATP synthase; n=1; H... 33 7.3 UniRef50_Q2S040 Cluster: Transcription termination factor rho; n... 33 7.3 UniRef50_Q9F696 Cluster: Flagella-specific ATPase; n=16; Alphapr... 33 7.3 UniRef50_Q1AVG2 Cluster: Transcription termination factor Rho; n... 33 7.3 UniRef50_A4M4Z8 Cluster: Putative uncharacterized protein; n=1; ... 33 7.3 UniRef50_A2WHW2 Cluster: Flagellar biosynthesis/type III secreto... 33 7.3 UniRef50_A7PWU3 Cluster: Chromosome chr19 scaffold_35, whole gen... 33 7.3 UniRef50_Q5CS50 Cluster: Putative uncharacterized protein; n=2; ... 33 7.3 UniRef50_Q98QX4 Cluster: ATP SYNTHASE BETA CHAIN; n=1; Mycoplasm... 33 9.7 UniRef50_Q7URK7 Cluster: Excinuclease ABC subunit A; n=1; Pirell... 33 9.7 UniRef50_Q3IUV2 Cluster: TraG; n=1; Rhodobacter sphaeroides 2.4.... 33 9.7 UniRef50_Q2S0E2 Cluster: Transcription termination factor Rho; n... 33 9.7 UniRef50_Q2RXS1 Cluster: Putative uncharacterized protein precur... 33 9.7 UniRef50_A6VUA3 Cluster: Positive regulator of sigma E, RseC/Muc... 33 9.7 UniRef50_A6Q2N1 Cluster: Flagellar-specific ATP synthase FliI; n... 33 9.7 UniRef50_A5GCR1 Cluster: H+-transporting two-sector ATPase, alph... 33 9.7 UniRef50_A2BND1 Cluster: DNA gyrase/topoisomerase IV, subunit A;... 33 9.7 UniRef50_A2F8P6 Cluster: ABC transporter family protein; n=1; Tr... 33 9.7 UniRef50_Q4PCL5 Cluster: Putative uncharacterized protein; n=1; ... 33 9.7 UniRef50_O94034 Cluster: Nucleotide phosphodiesterase; n=4; Sacc... 33 9.7 UniRef50_O83541 Cluster: V-type ATP synthase alpha chain 2; n=7;... 33 9.7 UniRef50_Q92HL2 Cluster: Transcription termination factor rho; n... 33 9.7 >UniRef50_P25705 Cluster: ATP synthase subunit alpha, mitochondrial precursor; n=489; cellular organisms|Rep: ATP synthase subunit alpha, mitochondrial precursor - Homo sapiens (Human) Length = 553 Score = 163 bits (395), Expect = 5e-39 Identities = 77/89 (86%), Positives = 85/89 (95%) Frame = +2 Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427 L ++QAEEMVEFSSGLKGM+LNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGE++ Sbjct: 87 LRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEEL 146 Query: 428 LGRVVDALGNPIDGKGPIDTKSRMRVGLR 514 LGRVVDALGN IDGKGPI +K+R RVGL+ Sbjct: 147 LGRVVDALGNAIDGKGPIGSKTRRRVGLK 175 Score = 144 bits (349), Expect = 2e-33 Identities = 68/76 (89%), Positives = 72/76 (94%) Frame = +1 Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690 KAP IIPR+SVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKT++AIDTIINQ+RFN Sbjct: 175 KAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFND 234 Query: 691 GEDEKKKLYCIYVVIG 738 G DEKKKLYCIYV IG Sbjct: 235 GSDEKKKLYCIYVAIG 250 Score = 87.0 bits (206), Expect = 4e-16 Identities = 47/88 (53%), Positives = 57/88 (64%), Gaps = 4/88 (4%) Frame = +3 Query: 3 LISARIAGSVARRLPNAATQVSKXXXXXXXXXSRKLHVSTTHK----AAEISTILEERIL 170 ++S R+A +V R LP A VS+ +R H S TH AE+S+ILEERIL Sbjct: 1 MLSVRVAAAVVRALPRRAGLVSRNALGSSFIAARNFHASNTHLQKTGTAEMSSILEERIL 60 Query: 171 GAAPKADLEETGRVLSIGDGIARVYGLK 254 GA DLEETGRVLSIGDGIARV+GL+ Sbjct: 61 GADTSVDLEETGRVLSIGDGIARVHGLR 88 >UniRef50_P35381 Cluster: ATP synthase subunit alpha, mitochondrial precursor; n=847; cellular organisms|Rep: ATP synthase subunit alpha, mitochondrial precursor - Drosophila melanogaster (Fruit fly) Length = 552 Score = 159 bits (386), Expect = 7e-38 Identities = 75/89 (84%), Positives = 84/89 (94%) Frame = +2 Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427 L +IQA+EMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIK+GDIVKRTGAIVDVPVG+++ Sbjct: 86 LNNIQADEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKQGDIVKRTGAIVDVPVGDEL 145 Query: 428 LGRVVDALGNPIDGKGPIDTKSRMRVGLR 514 LGRVVDALGN IDGKG I+TK R RVG++ Sbjct: 146 LGRVVDALGNAIDGKGAINTKDRFRVGIK 174 Score = 144 bits (348), Expect = 3e-33 Identities = 69/76 (90%), Positives = 72/76 (94%) Frame = +1 Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690 KAP IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQ+RFN+ Sbjct: 174 KAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKRFNE 233 Query: 691 GEDEKKKLYCIYVVIG 738 +DE KKLYCIYV IG Sbjct: 234 AQDESKKLYCIYVAIG 249 Score = 111 bits (267), Expect = 2e-23 Identities = 58/84 (69%), Positives = 66/84 (78%), Gaps = 1/84 (1%) Frame = +3 Query: 3 LISARIAGSVARRLPNAATQVS-KXXXXXXXXXSRKLHVSTTHKAAEISTILEERILGAA 179 + SAR+A SVAR LP AA QV+ K +RKLHV++T ++AEIS ILEERILG A Sbjct: 3 IFSARLASSVARNLPKAANQVACKAAYPAASLAARKLHVASTQRSAEISNILEERILGVA 62 Query: 180 PKADLEETGRVLSIGDGIARVYGL 251 PKADLEETGRVLSIGDGIARVYGL Sbjct: 63 PKADLEETGRVLSIGDGIARVYGL 86 >UniRef50_A0D564 Cluster: ATP synthase subunit alpha; n=1; Paramecium tetraurelia|Rep: ATP synthase subunit alpha - Paramecium tetraurelia Length = 612 Score = 137 bits (332), Expect = 2e-31 Identities = 64/89 (71%), Positives = 76/89 (85%) Frame = +2 Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427 L +QA EMVEFSSG++GMALNLE DNVG+VV GND+ I+EGDIVKRTGAIVDVP+G ++ Sbjct: 67 LTQVQAGEMVEFSSGVRGMALNLETDNVGIVVLGNDREIQEGDIVKRTGAIVDVPIGMEM 126 Query: 428 LGRVVDALGNPIDGKGPIDTKSRMRVGLR 514 LGRV DALGNPIDG GP+ T +R RV L+ Sbjct: 127 LGRVFDALGNPIDGHGPVKTNTRRRVELK 155 Score = 121 bits (291), Expect = 2e-26 Identities = 61/77 (79%), Positives = 67/77 (87%), Gaps = 1/77 (1%) Frame = +1 Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQ-RFN 687 KAP IIPR SV EPMQTG+KAVD LVPIGRGQRELIIGDRQTGKTA+AIDTIINQ+ F+ Sbjct: 155 KAPGIIPRKSVHEPMQTGLKAVDCLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKPNFD 214 Query: 688 KGEDEKKKLYCIYVVIG 738 G D+ K+LYCIYV IG Sbjct: 215 SG-DKNKQLYCIYVAIG 230 Score = 35.9 bits (79), Expect = 1.0 Identities = 15/21 (71%), Positives = 19/21 (90%) Frame = +3 Query: 189 DLEETGRVLSIGDGIARVYGL 251 D++E G V+SIGDGIARV+GL Sbjct: 47 DIKEYGTVISIGDGIARVFGL 67 >UniRef50_Q35058 Cluster: AtpA intron2 ORF; n=8; Embryophyta|Rep: AtpA intron2 ORF - Marchantia polymorpha (Liverwort) Length = 1259 Score = 129 bits (311), Expect = 8e-29 Identities = 62/89 (69%), Positives = 74/89 (83%) Frame = +2 Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427 L IQA EMVEF+SG+KGMALNLE +NVG+V+FG+D IKEGDIVKRTG+IVDVPVG+ + Sbjct: 45 LNKIQAGEMVEFASGVKGMALNLENENVGIVIFGSDTAIKEGDIVKRTGSIVDVPVGKGM 104 Query: 428 LGRVVDALGNPIDGKGPIDTKSRMRVGLR 514 LGRVVDALG PIDGKG + R RV ++ Sbjct: 105 LGRVVDALGVPIDGKGALSAVERRRVEVK 133 Score = 121 bits (291), Expect = 2e-26 Identities = 58/77 (75%), Positives = 67/77 (87%), Gaps = 1/77 (1%) Frame = +1 Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFN- 687 KAP II R SV EPMQTG+KAVDSLVPIGRGQRELIIGDRQTGKTA+AIDTI+NQ++ N Sbjct: 133 KAPGIIARKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINA 192 Query: 688 KGEDEKKKLYCIYVVIG 738 +G + +KLYC+YV IG Sbjct: 193 QGTSDSEKLYCVYVAIG 209 Score = 53.2 bits (122), Expect = 6e-06 Identities = 24/39 (61%), Positives = 31/39 (79%) Frame = +3 Query: 135 AEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGL 251 AE+ST+LE+RI K ++E GRV+S+GDGIARVYGL Sbjct: 7 AELSTLLEQRITNYYTKLQVDEIGRVVSVGDGIARVYGL 45 >UniRef50_UPI00005A408F Cluster: PREDICTED: similar to ATP synthase alpha chain, mitochondrial precursor; n=1; Canis lupus familiaris|Rep: PREDICTED: similar to ATP synthase alpha chain, mitochondrial precursor - Canis familiaris Length = 301 Score = 125 bits (302), Expect = 1e-27 Identities = 60/76 (78%), Positives = 66/76 (86%) Frame = +1 Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690 K P IIP +SVREPM+TGIKAVDSLVPIGRGQ ELII + QTGKT++AIDTIINQ+ N Sbjct: 71 KGPGIIPPISVREPMKTGIKAVDSLVPIGRGQHELIISNWQTGKTSIAIDTIINQKHLND 130 Query: 691 GEDEKKKLYCIYVVIG 738 G DEKKKLYCIYVVIG Sbjct: 131 GTDEKKKLYCIYVVIG 146 Score = 111 bits (267), Expect = 2e-23 Identities = 53/71 (74%), Positives = 60/71 (84%) Frame = +2 Query: 302 MALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 481 M+LNL PD VGVVVFGNDKLIKEGDIVKRT A VDVPVG+++ G VVDALGN DGKGPI Sbjct: 1 MSLNLGPDKVGVVVFGNDKLIKEGDIVKRTEATVDVPVGKELPGHVVDALGNATDGKGPI 60 Query: 482 DTKSRMRVGLR 514 +K+ RVGL+ Sbjct: 61 GSKTHRRVGLK 71 >UniRef50_Q5FRC7 Cluster: ATP synthase subunit alpha 1; n=100; cellular organisms|Rep: ATP synthase subunit alpha 1 - Gluconobacter oxydans (Gluconobacter suboxydans) Length = 511 Score = 118 bits (284), Expect = 2e-25 Identities = 56/76 (73%), Positives = 63/76 (82%) Frame = +1 Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690 KAP I+PR SV EPMQTGIKA+D+LVPIGRGQRELIIGDRQTGKTA+ IDTI+ Q+ N Sbjct: 133 KAPGIMPRQSVSEPMQTGIKAIDALVPIGRGQRELIIGDRQTGKTAILIDTIVAQKPVNA 192 Query: 691 GEDEKKKLYCIYVVIG 738 D KK LYCIYV +G Sbjct: 193 EGDPKKSLYCIYVAVG 208 Score = 109 bits (261), Expect = 9e-23 Identities = 52/79 (65%), Positives = 65/79 (82%), Gaps = 1/79 (1%) Frame = +2 Query: 248 LEDIQAEEMVEFS-SGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQ 424 L ++ A EMVEF +GLKGMALNLE DNVGVV+FG+ I+EGD V RT ++V+VPVG+ Sbjct: 44 LTNVMAGEMVEFEGTGLKGMALNLEADNVGVVLFGDGDSIREGDTVLRTKSVVEVPVGKG 103 Query: 425 ILGRVVDALGNPIDGKGPI 481 +LGRVVD LGNPIDG+GP+ Sbjct: 104 LLGRVVDGLGNPIDGRGPL 122 Score = 47.2 bits (107), Expect = 4e-04 Identities = 24/41 (58%), Positives = 29/41 (70%) Frame = +3 Query: 129 KAAEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGL 251 + AEIS IL+++I + ETG VLSIGDGIARVYGL Sbjct: 4 RPAEISDILKQQIASFDQVETVSETGTVLSIGDGIARVYGL 44 >UniRef50_Q29596 Cluster: ATP synthase subunit alpha liver isoform, mitochondrial precursor; n=20; cellular organisms|Rep: ATP synthase subunit alpha liver isoform, mitochondrial precursor - Sus scrofa (Pig) Length = 148 Score = 112 bits (269), Expect = 1e-23 Identities = 53/58 (91%), Positives = 56/58 (96%) Frame = +2 Query: 260 QAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILG 433 QAEEMVEFSSGLKGM+LNLEPDNVGVVVFGNDKLIKEGDIVKRTG IVDVPVG+ +LG Sbjct: 91 QAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGXIVDVPVGKDLLG 148 Score = 82.6 bits (195), Expect = 9e-15 Identities = 46/88 (52%), Positives = 55/88 (62%), Gaps = 4/88 (4%) Frame = +3 Query: 3 LISARIAGSVARRLPNAATQVSKXXXXXXXXXSRKLHVSTTHK----AAEISTILEERIL 170 ++S R+A +VAR LP A VSK + LH S T AE+S+ILE RIL Sbjct: 1 MLSVRVAAAVARXLPRRAGXVSKNALGSSFVAAXNLHASNTRLQKTGTAEVSSILEXRIL 60 Query: 171 GAAPKADLEETGRVLSIGDGIARVYGLK 254 GA DLEETGRVLSIGDGIARV+G + Sbjct: 61 GADTSVDLEETGRVLSIGDGIARVHGXR 88 >UniRef50_P45825 Cluster: ATP synthase subunit alpha; n=47; Bacteria|Rep: ATP synthase subunit alpha - Mycobacterium leprae Length = 558 Score = 105 bits (251), Expect = 1e-21 Identities = 47/96 (48%), Positives = 70/96 (72%) Frame = +1 Query: 451 GKPY*WQGTNRHEIPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDR 630 G+P +G E +AP ++ R SV+EP+QTGIKA+D++ PIGRGQR+L+IGDR Sbjct: 115 GQPIDGRGDIEAEARRALELQAPSVVQRQSVKEPLQTGIKAIDAMTPIGRGQRQLVIGDR 174 Query: 631 QTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVVIG 738 +TGKTA+ +DTI+NQ++ + D K+++ C+YV IG Sbjct: 175 KTGKTAVCVDTILNQRQNWESGDPKRQVRCVYVAIG 210 Score = 95.5 bits (227), Expect = 1e-18 Identities = 43/89 (48%), Positives = 63/89 (70%) Frame = +2 Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427 L + +E++EF G+ G+ALNL+ NVG V+ G+ + IKEG VKRTG ++ VPVGE Sbjct: 47 LPSVMTQELLEFPGGILGVALNLDEHNVGAVILGDFENIKEGQKVKRTGDVLSVPVGEAF 106 Query: 428 LGRVVDALGNPIDGKGPIDTKSRMRVGLR 514 +GRVV+ LG PIDG+G I+ ++R + L+ Sbjct: 107 MGRVVNPLGQPIDGRGDIEAEARRALELQ 135 >UniRef50_Q6A8C5 Cluster: ATP synthase subunit alpha; n=2; Bacteria|Rep: ATP synthase subunit alpha - Propionibacterium acnes Length = 545 Score = 102 bits (245), Expect = 8e-21 Identities = 46/72 (63%), Positives = 61/72 (84%) Frame = +1 Query: 523 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDE 702 ++ R VREP+QTG+KA+DS++PIGRGQR+LIIGDR+TGKTA+AIDTIINQ+ + D Sbjct: 141 VMDRQEVREPLQTGLKAIDSMIPIGRGQRQLIIGDRKTGKTAIAIDTIINQKGNWESGDP 200 Query: 703 KKKLYCIYVVIG 738 +K++ CIYV IG Sbjct: 201 QKQVRCIYVAIG 212 Score = 86.6 bits (205), Expect = 6e-16 Identities = 41/78 (52%), Positives = 52/78 (66%) Frame = +2 Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427 L A E++ F +G G+ALNLE +GVVV G+ I EG V+ TG ++ VPVGE Sbjct: 48 LPSAMANELLRFENGTMGIALNLEERQIGVVVLGDSDGIDEGSTVRGTGEVLSVPVGEGY 107 Query: 428 LGRVVDALGNPIDGKGPI 481 LGRVVDA+GNP+DG G I Sbjct: 108 LGRVVDAMGNPVDGLGEI 125 >UniRef50_A3FPS2 Cluster: ATP synthase subunit alpha; n=2; Cryptosporidium|Rep: ATP synthase subunit alpha - Cryptosporidium parvum Iowa II Length = 639 Score = 101 bits (241), Expect = 2e-20 Identities = 47/89 (52%), Positives = 66/89 (74%) Frame = +2 Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427 + ++ E+VEFSSG KGMALNLE D+VG+V+ G D+ I++GD V T IV+ PVG+++ Sbjct: 166 IRSVKYGELVEFSSGEKGMALNLENDHVGIVILGEDRNIRKGDQVISTNTIVNCPVGKEL 225 Query: 428 LGRVVDALGNPIDGKGPIDTKSRMRVGLR 514 LGRVVDALGNPIDGK I + + + ++ Sbjct: 226 LGRVVDALGNPIDGKPSIISLEKREIDVK 254 Score = 92.7 bits (220), Expect = 9e-18 Identities = 44/76 (57%), Positives = 57/76 (75%) Frame = +1 Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690 KAP I+ R + E + TGIK +DSL+PIG GQRE I+GDRQTGKT+L +D I+NQ++F Sbjct: 254 KAPGIMDRKPINEQLITGIKFIDSLIPIGLGQREAIVGDRQTGKTSLVLDIILNQRKFY- 312 Query: 691 GEDEKKKLYCIYVVIG 738 +D K + YCIYV IG Sbjct: 313 -DDIKTRKYCIYVAIG 327 >UniRef50_Q0SGP7 Cluster: ATP synthase subunit alpha; n=17; cellular organisms|Rep: ATP synthase subunit alpha - Rhodococcus sp. (strain RHA1) Length = 547 Score = 96.7 bits (230), Expect = 5e-19 Identities = 43/76 (56%), Positives = 60/76 (78%) Frame = +1 Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690 +A ++ R V EP+QTGIKA+D++ PIGRGQR+L+IGDR+TGKTA+ ID I+NQ+ + Sbjct: 135 QAASVLERQPVEEPLQTGIKAIDAMTPIGRGQRQLVIGDRKTGKTAVCIDAILNQKANWE 194 Query: 691 GEDEKKKLYCIYVVIG 738 DEK+++ CIYV IG Sbjct: 195 TGDEKQQVRCIYVAIG 210 Score = 85.0 bits (201), Expect = 2e-15 Identities = 39/89 (43%), Positives = 58/89 (65%) Frame = +2 Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427 L A E++EF G+ G+ALNL+ +G V+ G+ + I+EG VKRTG ++ VPVG+ Sbjct: 47 LPSAMANELLEFPGGILGVALNLDATEIGAVILGDYENIQEGQEVKRTGDVLSVPVGDAF 106 Query: 428 LGRVVDALGNPIDGKGPIDTKSRMRVGLR 514 LGRV++ LG PIDG G I++ + L+ Sbjct: 107 LGRVINPLGQPIDGLGEIESNETRALELQ 135 >UniRef50_O50140 Cluster: ATP synthase subunit alpha; n=2; Firmicutes|Rep: ATP synthase subunit alpha - Ruminococcus albus Length = 523 Score = 95.9 bits (228), Expect = 9e-19 Identities = 48/80 (60%), Positives = 59/80 (73%) Frame = +2 Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427 LE + E++EF +G GMA+NLE D VG V+ G ++ I+EG VKRTG IV VPVGE + Sbjct: 44 LEKCMSGELLEFENGTYGMAMNLEQDFVGCVLLGTEEGIREGSNVKRTGRIVSVPVGEAM 103 Query: 428 LGRVVDALGNPIDGKGPIDT 487 LGRVV+ALG PIDGKG I T Sbjct: 104 LGRVVNALGAPIDGKGAILT 123 Score = 94.7 bits (225), Expect = 2e-18 Identities = 48/72 (66%), Positives = 56/72 (77%) Frame = +1 Query: 523 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDE 702 II R SV P+QTGIKA+DS++P+GRGQRELIIGDRQTGKT +A+DTIINQ KG Sbjct: 136 IITRKSVNRPLQTGIKAIDSMIPVGRGQRELIIGDRQTGKTTIALDTIINQ----KG--- 188 Query: 703 KKKLYCIYVVIG 738 K + CIYV IG Sbjct: 189 -KNVICIYVAIG 199 >UniRef50_A6PZL5 Cluster: ATP synthase subunit alpha; n=4; Leuconostocaceae|Rep: ATP synthase subunit alpha - Leuconostoc durionis Length = 297 Score = 92.7 bits (220), Expect = 9e-18 Identities = 47/76 (61%), Positives = 60/76 (78%) Frame = +1 Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690 KAP ++ R SV EP+QTGIKA+D+LVPIGRGQRELIIGDR+TGKT++A+DTI+NQ K Sbjct: 95 KAPGVMARKSVSEPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSIAVDTILNQ----K 150 Query: 691 GEDEKKKLYCIYVVIG 738 +D + IYV +G Sbjct: 151 DQD----MIVIYVAVG 162 Score = 92.3 bits (219), Expect = 1e-17 Identities = 40/73 (54%), Positives = 57/73 (78%) Frame = +2 Query: 269 EMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDA 448 E+V F++G GM NLE VG++V G+ + I+EGD VKRTG +++VPVGE+++GRVV+A Sbjct: 14 ELVTFNNGAYGMVQNLEESEVGIIVLGSSEGIREGDTVKRTGHVMEVPVGEELIGRVVNA 73 Query: 449 LGNPIDGKGPIDT 487 LG PIDG G ++T Sbjct: 74 LGQPIDGLGDLNT 86 >UniRef50_Q9PR12 Cluster: ATP synthase subunit alpha; n=1037; cellular organisms|Rep: ATP synthase subunit alpha - Ureaplasma parvum (Ureaplasma urealyticum biotype 1) Length = 799 Score = 92.3 bits (219), Expect = 1e-17 Identities = 45/78 (57%), Positives = 58/78 (74%) Frame = +2 Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427 L+++ E+V F +G++GMALNLE D VGVV+ G+ IKEGD V RT IV+VPVG+ + Sbjct: 45 LDNVMLNEIVRFENGVEGMALNLEEDAVGVVLLGDYSNIKEGDRVYRTKRIVEVPVGDVM 104 Query: 428 LGRVVDALGNPIDGKGPI 481 LGRVVDALG +D KG I Sbjct: 105 LGRVVDALGKAVDNKGNI 122 Score = 84.6 bits (200), Expect = 2e-15 Identities = 42/75 (56%), Positives = 56/75 (74%) Frame = +1 Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 693 AP ++ R SV +P++TGI ++D++ PIG+GQRELIIGDRQTGKT +AID IINQ KG Sbjct: 134 APGVMDRKSVHQPLETGILSIDAMFPIGKGQRELIIGDRQTGKTTIAIDAIINQ----KG 189 Query: 694 EDEKKKLYCIYVVIG 738 + + C+YV IG Sbjct: 190 ----RNVNCVYVAIG 200 >UniRef50_Q9AHX2 Cluster: ATP synthase alpha subunit; n=10; Candidatus Carsonella ruddii|Rep: ATP synthase alpha subunit - Carsonella ruddii Length = 481 Score = 90.2 bits (214), Expect = 5e-17 Identities = 43/75 (57%), Positives = 56/75 (74%) Frame = +1 Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 693 AP ++ R +V EP+ TGIK++DS++PIG+GQRELIIGDRQTGKT + IDTIINQ Sbjct: 109 APGVMDRETVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTICIDTIINQ------ 162 Query: 694 EDEKKKLYCIYVVIG 738 + K + C+YV IG Sbjct: 163 --KNKNIICVYVCIG 175 Score = 57.2 bits (132), Expect = 4e-07 Identities = 24/75 (32%), Positives = 46/75 (61%) Frame = +2 Query: 242 LWLEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGE 421 L L++ + EM+ FS +KG+ +L NV +++ N + +G+ T I +VPVG+ Sbjct: 18 LGLKNAKYGEMILFSKNIKGIVFSLNKKNVNIIILNNYNELTQGEKCYCTNKIFEVPVGK 77 Query: 422 QILGRVVDALGNPID 466 Q++GR++++ G +D Sbjct: 78 QLIGRIINSRGETLD 92 >UniRef50_Q21Z99 Cluster: ATP synthase subunit alpha 2; n=22; cellular organisms|Rep: ATP synthase subunit alpha 2 - Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) Length = 534 Score = 89.8 bits (213), Expect = 6e-17 Identities = 49/98 (50%), Positives = 66/98 (67%), Gaps = 2/98 (2%) Frame = +1 Query: 451 GKPY*WQG--TNRHEIPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIG 624 G+P +G + H +P E R +PI+ R V P+QTG+K +D+L+P+GRGQRELI+G Sbjct: 118 GRPLDGRGPVASSHRLPIE-RPASPIM-DRAPVTVPLQTGLKVIDALIPVGRGQRELILG 175 Query: 625 DRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVVIG 738 DRQTGKTA+AIDTI+NQQ N + C+Y IG Sbjct: 176 DRQTGKTAIAIDTILNQQGQN--------VLCVYCAIG 205 Score = 79.0 bits (186), Expect = 1e-13 Identities = 35/86 (40%), Positives = 56/86 (65%) Frame = +2 Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427 L + +E+V+F L G+A N++ +GVV+ G + GD V RTG ++DV VG+ + Sbjct: 50 LPGVGFDELVKFPGDLFGIAFNVDEAEIGVVLLGEYWHLHAGDEVDRTGRVMDVAVGDGL 109 Query: 428 LGRVVDALGNPIDGKGPIDTKSRMRV 505 LGRV+D LG P+DG+GP+ + R+ + Sbjct: 110 LGRVIDPLGRPLDGRGPVASSHRLPI 135 >UniRef50_Q4QJF1 Cluster: ATPase alpha subunit; n=9; Trypanosomatidae|Rep: ATPase alpha subunit - Leishmania major Length = 574 Score = 87.8 bits (208), Expect = 2e-16 Identities = 43/75 (57%), Positives = 54/75 (72%) Frame = +1 Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 693 AP I+ R V + TG KAVD+++PIGRGQRELI+GDRQTGKT++A+ TIINQ R N+ Sbjct: 160 APNIVSRSPVNYNLLTGFKAVDTMIPIGRGQRELIVGDRQTGKTSIAVSTIINQVRSNQQ 219 Query: 694 EDEKKKLYCIYVVIG 738 K + IYV IG Sbjct: 220 ILSKNAVISIYVSIG 234 Score = 45.6 bits (103), Expect = 0.001 Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%) Frame = +2 Query: 299 GMALNLEPDN-VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPI 463 G+ NLE D +G+++ N ++ G V TG ++ +PVG +LG+VV+ LG+ + Sbjct: 80 GLVFNLEKDGRIGIILMDNITEVQSGQKVMATGKLLYIPVGAGVLGKVVNPLGHEV 135 >UniRef50_A3JAC3 Cluster: F0F1 ATP synthase subunit alpha; n=3; Proteobacteria|Rep: F0F1 ATP synthase subunit alpha - Marinobacter sp. ELB17 Length = 549 Score = 81.4 bits (192), Expect = 2e-14 Identities = 39/76 (51%), Positives = 55/76 (72%) Frame = +1 Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690 +AP ++ R ++ +P+ TGIKA+D+ VP+G GQRELIIGDRQTGKT++A+DT++NQ R Sbjct: 168 EAPGVLSRSAIFKPLATGIKAIDAAVPVGLGQRELIIGDRQTGKTSIAVDTMLNQIR--- 224 Query: 691 GEDEKKKLYCIYVVIG 738 + CIY IG Sbjct: 225 -----SDVICIYCAIG 235 Score = 77.4 bits (182), Expect = 3e-13 Identities = 35/73 (47%), Positives = 54/73 (73%) Frame = +2 Query: 263 AEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVV 442 A+E++ F+SG++G+ L+LEP +GV++ G + I+ G+ V+RT ++ VPVG +LGRVV Sbjct: 85 ADELLIFASGVRGIVLDLEPGRLGVILLGPSEHIRLGEDVRRTRKVISVPVGPALLGRVV 144 Query: 443 DALGNPIDGKGPI 481 DA+G P DG G I Sbjct: 145 DAVGLPRDGLGVI 157 >UniRef50_Q9BBC2 Cluster: ATPase CF1 alpha subunit; n=4; Dinophyceae|Rep: ATPase CF1 alpha subunit - Amphidinium carterae (Dinoflagellate) Length = 464 Score = 81.4 bits (192), Expect = 2e-14 Identities = 35/53 (66%), Positives = 46/53 (86%) Frame = +1 Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIIN 672 AP I+ R SV EP+ TGI ++D+++PIGRGQRELIIGDRQTGKT++ +DTI+N Sbjct: 108 APSIVSRQSVCEPLATGIVSIDAMIPIGRGQRELIIGDRQTGKTSICLDTIVN 160 >UniRef50_Q62EB0 Cluster: ATP synthase subunit alpha 2; n=25; Proteobacteria|Rep: ATP synthase subunit alpha 2 - Burkholderia mallei (Pseudomonas mallei) Length = 670 Score = 81.4 bits (192), Expect = 2e-14 Identities = 45/85 (52%), Positives = 54/85 (63%) Frame = +1 Query: 484 HEIPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDT 663 H +P E AP II R V EP+ TG+ VD+L IGRGQRELIIGDR TGKT+LAID Sbjct: 136 HTLPIERA--APAIIERDLVSEPLDTGVLIVDALFTIGRGQRELIIGDRATGKTSLAIDA 193 Query: 664 IINQQRFNKGEDEKKKLYCIYVVIG 738 I+NQ+ + C+YV IG Sbjct: 194 IVNQRH--------SDVICVYVAIG 210 Score = 77.0 bits (181), Expect = 5e-13 Identities = 35/79 (44%), Positives = 49/79 (62%) Frame = +2 Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427 LED E++ F G+ G A L+ D + VV+ D ++ V RTGA+++VP G Q+ Sbjct: 55 LEDTMLNEVLRFEGGVTGFAHTLDEDLISVVLLDPDAGVRAQTAVARTGAVLEVPAGPQL 114 Query: 428 LGRVVDALGNPIDGKGPID 484 LGRVVD LG P+DG P+D Sbjct: 115 LGRVVDPLGRPLDGGAPLD 133 >UniRef50_Q9TAH9 Cluster: ATP synthase subunit alpha; n=1; Cafeteria roenbergensis|Rep: ATP synthase subunit alpha - Cafeteria roenbergensis Length = 601 Score = 80.6 bits (190), Expect = 4e-14 Identities = 39/60 (65%), Positives = 47/60 (78%) Frame = +1 Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690 +AP II R SV +P+ TG+ VDS+VPIG GQRELIIGDRQ GKTA+AID I+NQ N+ Sbjct: 189 QAPGIIVRKSVNKPLLTGLNCVDSMVPIGLGQRELIIGDRQVGKTAVAIDMILNQAFLNE 248 Score = 60.1 bits (139), Expect = 6e-08 Identities = 25/58 (43%), Positives = 41/58 (70%) Frame = +2 Query: 293 LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 466 ++GM + +E D + V++FG+++ +K GD V+ G IV + VG +LGRV+D LGN +D Sbjct: 96 VEGMVVGIEQDYISVIIFGDERFVKVGDRVRPRGNIVAINVGIGLLGRVIDPLGNVLD 153 >UniRef50_Q92FH0 Cluster: ATP synthase subunit alpha 1; n=13; Listeria|Rep: ATP synthase subunit alpha 1 - Listeria innocua Length = 498 Score = 78.2 bits (184), Expect = 2e-13 Identities = 38/74 (51%), Positives = 51/74 (68%) Frame = +1 Query: 517 PIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGE 696 P I+ SV P+ TG+ +DS+ PIGRGQR+LI+G+RQ+GKT +A+DTIINQ N Sbjct: 129 PAIMTIDSVTRPLNTGLAVIDSITPIGRGQRQLILGNRQSGKTQIAVDTIINQHNQN--- 185 Query: 697 DEKKKLYCIYVVIG 738 ++CIYV IG Sbjct: 186 -----VHCIYVAIG 194 Score = 33.9 bits (74), Expect = 4.2 Identities = 19/69 (27%), Positives = 32/69 (46%) Frame = +2 Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427 LE+ + V +G+ L L + VG+ + I EG V T ++V + E + Sbjct: 39 LENAALHQAVTIDGRHRGVILELNEEFVGIGLIDKTNDILEGMSVSVTDHFIEVNLFEDM 98 Query: 428 LGRVVDALG 454 GR++D G Sbjct: 99 AGRIIDTTG 107 >UniRef50_Q1PVR1 Cluster: Strongly similar to ATPA gene encoding subunit alpha of ATP synthase; n=1; Candidatus Kuenenia stuttgartiensis|Rep: Strongly similar to ATPA gene encoding subunit alpha of ATP synthase - Candidatus Kuenenia stuttgartiensis Length = 498 Score = 76.6 bits (180), Expect = 6e-13 Identities = 38/75 (50%), Positives = 53/75 (70%) Frame = +1 Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 693 AP ++ R + EP+ TGIK +DS++ IG+GQRELIIGD TGK+++AIDT+INQ Sbjct: 133 APSLLQRDFITEPLYTGIKVIDSMLAIGKGQRELIIGDPSTGKSSIAIDTVINQ------ 186 Query: 694 EDEKKKLYCIYVVIG 738 + ++ IYVVIG Sbjct: 187 --KNSRVISIYVVIG 199 Score = 57.6 bits (133), Expect = 3e-07 Identities = 31/77 (40%), Positives = 45/77 (58%) Frame = +2 Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427 L D + E++ F SG +G++ +L D++ VV+ I+ GD +T I V E + Sbjct: 44 LRDAKLYELILFESGDEGISFDLGVDSIAVVLLTGRNGIRAGDTAYKTDRIASVNATEGL 103 Query: 428 LGRVVDALGNPIDGKGP 478 LGRV+ ALGNPID GP Sbjct: 104 LGRVLGALGNPID-NGP 119 >UniRef50_Q6KHZ3 Cluster: ATP synthase alpha chain; n=1; Mycoplasma mobile|Rep: ATP synthase alpha chain - Mycoplasma mobile Length = 516 Score = 75.8 bits (178), Expect = 1e-12 Identities = 32/52 (61%), Positives = 46/52 (88%) Frame = +1 Query: 532 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFN 687 R S+ EP+QTGI ++D L+P+G+GQRELIIGDR+TGKT++A++TII+Q+ N Sbjct: 120 RKSLNEPVQTGIASIDMLIPLGKGQRELIIGDRRTGKTSVALNTIISQKNTN 171 >UniRef50_Q603U2 Cluster: ATP synthase subunit alpha 2; n=6; Proteobacteria|Rep: ATP synthase subunit alpha 2 - Methylococcus capsulatus Length = 503 Score = 75.8 bits (178), Expect = 1e-12 Identities = 38/75 (50%), Positives = 56/75 (74%) Frame = +1 Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 693 +P II R V++P+ TG + VD+LVPIG+GQR+LIIGD TG+++LAID ++NQ KG Sbjct: 142 SPPIIARDFVQQPLYTGTRLVDTLVPIGKGQRQLIIGDEGTGRSSLAIDAVLNQ----KG 197 Query: 694 EDEKKKLYCIYVVIG 738 +++ C+YV+IG Sbjct: 198 ----REVRCVYVLIG 208 Score = 61.7 bits (143), Expect = 2e-08 Identities = 26/77 (33%), Positives = 45/77 (58%) Frame = +2 Query: 266 EEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVD 445 ++++ F G + L +G V+ + + G + G +DVPVGE +LGRV+D Sbjct: 59 DDVLMFEDGSWAVVFALTKKRIGAVLLHQSENLTAGTPARLAGRTLDVPVGETLLGRVID 118 Query: 446 ALGNPIDGKGPIDTKSR 496 +GNP+DG P++T++R Sbjct: 119 PIGNPLDGGRPLETRNR 135 >UniRef50_Q9G8S6 Cluster: ATP synthase F1 subunit alpha; n=1; Naegleria gruberi|Rep: ATP synthase F1 subunit alpha - Naegleria gruberi Length = 550 Score = 73.3 bits (172), Expect = 6e-12 Identities = 35/58 (60%), Positives = 42/58 (72%) Frame = +1 Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFN 687 AP II R VR P TGI VD L+P+G GQRELIIGD+ TGKT+LAI ++NQ+ N Sbjct: 130 APGIIEREPVRVPFLTGINVVDCLIPVGCGQRELIIGDQNTGKTSLAISAVLNQRLVN 187 Score = 44.8 bits (101), Expect = 0.002 Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 4/73 (5%) Frame = +2 Query: 248 LEDIQAEEMVEFSS---GLKGMALNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPV 415 LE++ E+V+F S L G LNLE V +V+ G +K D+V RT V Sbjct: 28 LENVFVGEVVKFKSQESNLLGQVLNLEKSQVRIVMINGQQSHLKSNDLVYRTYKDVKTKA 87 Query: 416 GEQILGRVVDALG 454 G +LGRVV LG Sbjct: 88 GYGVLGRVVSPLG 100 >UniRef50_UPI0000EB1FE1 Cluster: UPI0000EB1FE1 related cluster; n=1; Canis lupus familiaris|Rep: UPI0000EB1FE1 UniRef100 entry - Canis familiaris Length = 383 Score = 71.3 bits (167), Expect = 2e-11 Identities = 43/73 (58%), Positives = 52/73 (71%) Frame = +2 Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427 L + QAEEMV FSS LK M LNLE D + VV + KEGD VKRTGAI+DV VG+++ Sbjct: 87 LRNAQAEEMVGFSS-LKCMCLNLEADML--VVLHLEMNTKEGDTVKRTGAIMDVLVGKKL 143 Query: 428 LGRVVDALGNPID 466 LGRVV A+G+ D Sbjct: 144 LGRVVGAIGDSKD 156 Score = 54.8 bits (126), Expect = 2e-06 Identities = 34/73 (46%), Positives = 43/73 (58%) Frame = +1 Query: 520 IIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGED 699 I +P +SV+EPM+TGIKAVDSLVPIG GQ E+ F+ G D Sbjct: 167 ITLP-ISVQEPMETGIKAVDSLVPIGPGQHEIC---------------------FSDGSD 204 Query: 700 EKKKLYCIYVVIG 738 E+KKLY IY+ +G Sbjct: 205 ERKKLYYIYIAVG 217 Score = 50.8 bits (116), Expect = 3e-05 Identities = 24/43 (55%), Positives = 32/43 (74%) Frame = +3 Query: 135 AEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKTSR 263 A +S++ EE ILGA ADLE+TG VLS GDGI R+ GL+ ++ Sbjct: 49 AGVSSVSEECILGANTSADLEDTGCVLSFGDGIVRISGLRNAQ 91 >UniRef50_A5IY82 Cluster: ATP synthase alpha chain; n=6; Mycoplasmataceae|Rep: ATP synthase alpha chain - Mycoplasma agalactiae Length = 524 Score = 71.3 bits (167), Expect = 2e-11 Identities = 37/66 (56%), Positives = 45/66 (68%) Frame = +1 Query: 541 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYC 720 + E + TGI A+D L+PIG+GQRELIIGDRQTGKT +A++ IINQ K C Sbjct: 140 LNEQLYTGINAIDLLIPIGKGQRELIIGDRQTGKTHIALNAIINQ--------AAKGTKC 191 Query: 721 IYVVIG 738 IYV IG Sbjct: 192 IYVAIG 197 >UniRef50_Q98QX5 Cluster: ATP SYNTHASE ALPHA CHAIN; n=2; Mycoplasma|Rep: ATP SYNTHASE ALPHA CHAIN - Mycoplasma pulmonis Length = 529 Score = 69.7 bits (163), Expect = 7e-11 Identities = 30/59 (50%), Positives = 47/59 (79%) Frame = +1 Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFN 687 +A I R +V P++TGI A+D+++PIGRGQ++LIIGD+ TGKTA+A++ I+ Q++ N Sbjct: 112 EAKPIYSRKAVNAPLETGITAIDAVLPIGRGQKQLIIGDKGTGKTAIALNAILAQEKSN 170 >UniRef50_Q4A6P2 Cluster: ATP synthase alpha chain; n=2; Mycoplasma synoviae 53|Rep: ATP synthase alpha chain - Mycoplasma synoviae (strain 53) Length = 514 Score = 69.7 bits (163), Expect = 7e-11 Identities = 37/66 (56%), Positives = 49/66 (74%) Frame = +1 Query: 541 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYC 720 +++ + TG VD L+PIGRGQR+LIIGDR+TGKT LA++TIINQ+ N+G + C Sbjct: 128 LKKQLLTGYVVVDLLIPIGRGQRQLIIGDRKTGKTFLALNTIINQK--NQG------VKC 179 Query: 721 IYVVIG 738 IYV IG Sbjct: 180 IYVAIG 185 >UniRef50_Q98QB7 Cluster: ATP synthase subunit alpha 2; n=1; Mycoplasma pulmonis|Rep: ATP synthase subunit alpha 2 - Mycoplasma pulmonis Length = 513 Score = 69.3 bits (162), Expect = 9e-11 Identities = 28/49 (57%), Positives = 43/49 (87%) Frame = +1 Query: 532 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQ 678 RV + EP++TGI ++D L+PIG+GQR+LI+GD +TGKT++A+ T+INQ+ Sbjct: 122 RVKLNEPLETGIFSIDILLPIGKGQRQLILGDSKTGKTSIALSTMINQK 170 >UniRef50_Q98PM2 Cluster: ATP SYNTHASE ALPHA CHAIN; n=1; Mycoplasma pulmonis|Rep: ATP SYNTHASE ALPHA CHAIN - Mycoplasma pulmonis Length = 509 Score = 68.9 bits (161), Expect = 1e-10 Identities = 38/78 (48%), Positives = 53/78 (67%), Gaps = 1/78 (1%) Frame = +1 Query: 508 FKAPI-IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRF 684 F P+ ++ R + E + TGI ++D PIGRGQRE+I+GD+QTGKT +A++TIINQ+ Sbjct: 114 FFQPVGMLERQHLSEQLYTGILSIDLFNPIGRGQREIIVGDKQTGKTHIALNTIINQR-- 171 Query: 685 NKGEDEKKKLYCIYVVIG 738 N G + CIYV IG Sbjct: 172 NSG------VKCIYVSIG 183 >UniRef50_Q9XXK1-2 Cluster: Isoform b of Q9XXK1 ; n=1; Caenorhabditis elegans|Rep: Isoform b of Q9XXK1 - Caenorhabditis elegans Length = 146 Score = 67.7 bits (158), Expect = 3e-10 Identities = 30/38 (78%), Positives = 36/38 (94%) Frame = +2 Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKL 361 L++IQAEEMVEF SG+KGMA+NL+ DNVGVVVFGNDK+ Sbjct: 72 LKNIQAEEMVEFDSGIKGMAMNLDVDNVGVVVFGNDKI 109 Score = 62.5 bits (145), Expect = 1e-08 Identities = 30/40 (75%), Positives = 34/40 (85%) Frame = +3 Query: 135 AEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLK 254 +E+S ILEERILG +LEETG+VLSIGDGIARVYGLK Sbjct: 34 SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLK 73 >UniRef50_Q600H8 Cluster: ATP synthase alpha chain; n=3; Mycoplasma hyopneumoniae|Rep: ATP synthase alpha chain - Mycoplasma hyopneumoniae (strain 232) Length = 512 Score = 65.7 bits (153), Expect = 1e-09 Identities = 35/72 (48%), Positives = 46/72 (63%) Frame = +1 Query: 523 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDE 702 ++ R + + TGI A+D PIG GQRELI+GDRQTGKT + I+TIINQ+ + Sbjct: 115 VLRRELIDRQIYTGIYAIDLFNPIGFGQRELIVGDRQTGKTHIGINTIINQK-------D 167 Query: 703 KKKLYCIYVVIG 738 + CIYV IG Sbjct: 168 SRTTKCIYVSIG 179 >UniRef50_Q2F981 Cluster: Ribosomal protein S2; n=3; Oryza sativa|Rep: Ribosomal protein S2 - Oryza sativa subsp. indica (Rice) Length = 483 Score = 64.1 bits (149), Expect = 3e-09 Identities = 30/38 (78%), Positives = 34/38 (89%) Frame = +1 Query: 523 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQT 636 I+ R SV EPMQTG+KAVDSLVPIGRG+RELIIG R+T Sbjct: 265 ILERKSVHEPMQTGLKAVDSLVPIGRGRRELIIGGRKT 302 >UniRef50_A0VM48 Cluster: Putative uncharacterized protein; n=3; Alphaproteobacteria|Rep: Putative uncharacterized protein - Dinoroseobacter shibae DFL 12 Length = 950 Score = 62.5 bits (145), Expect = 1e-08 Identities = 29/80 (36%), Positives = 50/80 (62%) Frame = -3 Query: 484 VDWSLAINRVSQSVYYTPKDLLSDGNVYDSTSTLDNISFFDKLVITKYYHTHIVRFQVKG 305 +D +LA+ RV+Q+++ + ++ G+V+D LD+++F D V + + THIV F+V+G Sbjct: 697 LDRALAVQRVAQAIHDPAQQRVAHGHVHDGLGALDDVAFLDVPVRAEDHDTHIVDFEVQG 756 Query: 304 HSLEA*GELHHLLSLDVFKP 245 H +A EL H L V +P Sbjct: 757 HPADAARELDHFTGLHVVQP 776 >UniRef50_A7DHD0 Cluster: Putative uncharacterized protein; n=2; Methylobacterium extorquens PA1|Rep: Putative uncharacterized protein - Methylobacterium extorquens PA1 Length = 680 Score = 56.4 bits (130), Expect = 7e-07 Identities = 30/84 (35%), Positives = 50/84 (59%) Frame = -3 Query: 505 DPHTGFRVDWSLAINRVSQSVYYTPKDLLSDGNVYDSTSTLDNISFFDKLVITKYYHTHI 326 D T R+D +LA++RV+++V + + L+D +V+D LD ++F + V + + I Sbjct: 443 DAATLGRLDRALAVDRVAEAVDHAAEQTLADRHVHDGAGPLDGLAFLNLTVGAEDHDADI 502 Query: 325 VRFQVKGHSLEA*GELHHLLSLDV 254 V +V+GH+ A EL HL LDV Sbjct: 503 VLLEVEGHAAHARLELDHLTGLDV 526 >UniRef50_A3L181 Cluster: ATP synthase beta chain; n=3; Gammaproteobacteria|Rep: ATP synthase beta chain - Pseudomonas aeruginosa C3719 Length = 154 Score = 55.2 bits (127), Expect = 2e-06 Identities = 25/53 (47%), Positives = 34/53 (64%) Frame = +2 Query: 338 VVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSR 496 + G+ + +K G V TGA + VPVG+ LGR++D LGNPID GPI + R Sbjct: 53 IAMGSTEGLKRGLNVDSTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEER 105 >UniRef50_Q8R9Z1 Cluster: Flagellar biosynthesis/type III secretory pathway ATPase; n=10; Bacteria|Rep: Flagellar biosynthesis/type III secretory pathway ATPase - Thermoanaerobacter tengcongensis Length = 437 Score = 53.6 bits (123), Expect = 5e-06 Identities = 26/58 (44%), Positives = 37/58 (63%) Frame = +2 Query: 308 LNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 481 + + + V ++ GN + I G V TG + V VG+ +LGRV+D LGNPIDGKGP+ Sbjct: 61 VGFKEEKVYLMPLGNMEGIGPGSKVIATGQTLKVNVGKSLLGRVLDGLGNPIDGKGPL 118 Score = 38.7 bits (86), Expect = 0.15 Identities = 23/67 (34%), Positives = 32/67 (47%) Frame = +1 Query: 451 GKPY*WQGTNRHEIPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDR 630 G P +G ++E P + R +RE M GIKA+D L+ G+GQR I Sbjct: 109 GNPIDGKGPLKYEKSIPVNNTPPDPLERKRIREVMPLGIKAIDGLLTCGKGQRIGIFAGS 168 Query: 631 QTGKTAL 651 GK+ L Sbjct: 169 GVGKSTL 175 >UniRef50_A0NUS5 Cluster: Putative uncharacterized protein; n=1; Stappia aggregata IAM 12614|Rep: Putative uncharacterized protein - Stappia aggregata IAM 12614 Length = 577 Score = 53.6 bits (123), Expect = 5e-06 Identities = 26/77 (33%), Positives = 46/77 (59%) Frame = -3 Query: 484 VDWSLAINRVSQSVYYTPKDLLSDGNVYDSTSTLDNISFFDKLVITKYYHTHIVRFQVKG 305 +D + A++RV++ V + L+D + +D LD ++FF+ V + T++V FQV+G Sbjct: 284 LDRAFAVDRVAERVDDAAQKALADWHFHDGAGPLDGVAFFNVTVGAEDNDTNVVGFQVQG 343 Query: 304 HSLEA*GELHHLLSLDV 254 H+L+ E H SLD+ Sbjct: 344 HALDTTREFDHFTSLDL 360 >UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondrial precursor; n=14; cellular organisms|Rep: ATP synthase subunit beta, mitochondrial precursor - Saccharomyces cerevisiae (Baker's yeast) Length = 511 Score = 50.8 bits (116), Expect = 3e-05 Identities = 23/65 (35%), Positives = 38/65 (58%) Frame = +2 Query: 302 MALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 481 +A +L + V + + + G+ V TG + VPVG + LGR+++ +G PID +GPI Sbjct: 83 VAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPI 142 Query: 482 DTKSR 496 +K R Sbjct: 143 KSKLR 147 Score = 33.5 bits (73), Expect = 5.5 Identities = 18/49 (36%), Positives = 25/49 (51%) Frame = +1 Query: 547 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 693 E ++TGIK VD L P RG + + G GKT + I N + + G Sbjct: 165 EILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGG 213 >UniRef50_Q01D41 Cluster: ATP synthase alpha chain, sodium ion specific; n=2; Ostreococcus|Rep: ATP synthase alpha chain, sodium ion specific - Ostreococcus tauri Length = 625 Score = 50.0 bits (114), Expect = 6e-05 Identities = 27/74 (36%), Positives = 40/74 (54%) Frame = +1 Query: 517 PIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGE 696 P + R + P+ TG+KAVD L P+GRGQ L+ G+ TG + L + TI Q Sbjct: 185 PTVEDRKPITTPLVTGVKAVDVLAPLGRGQCMLVSGEPGTGLSELCLTTIAAQ------- 237 Query: 697 DEKKKLYCIYVVIG 738 +K + C+Y +G Sbjct: 238 -KKTGVRCVYAALG 250 >UniRef50_Q93UD9 Cluster: ATP synthase beta subunit; n=12; Candidatus Carsonella ruddii|Rep: ATP synthase beta subunit - Carsonella ruddii Length = 139 Score = 49.6 bits (113), Expect = 8e-05 Identities = 24/59 (40%), Positives = 36/59 (61%) Frame = +2 Query: 329 VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRV 505 V V+ FG+ +K IV TG + PVG+ LGR+++ LGNPID KG I + ++ + Sbjct: 49 VRVIAFGDTNGLKRNMIVLDTGKPILTPVGDCTLGRILNILGNPIDNKGNIFSSKKVPI 107 >UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellular organisms|Rep: ATP synthase subunit beta - Rhizobium meliloti (Sinorhizobium meliloti) Length = 504 Score = 48.8 bits (111), Expect = 1e-04 Identities = 21/68 (30%), Positives = 40/68 (58%) Frame = +2 Query: 302 MALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 481 +A +L ++V + + + + G V TG + VPVG++ LGR+++ +G P+D GP+ Sbjct: 75 VAQHLGENSVRTIAMDSTEGLVRGQKVADTGGPIAVPVGKETLGRIMNVIGEPVDEAGPL 134 Query: 482 DTKSRMRV 505 T +R + Sbjct: 135 KTSARRAI 142 Score = 36.7 bits (81), Expect = 0.59 Identities = 19/61 (31%), Positives = 32/61 (52%) Frame = +1 Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690 +AP + + + + + TGIK VD L P +G + + G GKT L ++ I N + + Sbjct: 145 EAPAYVDQSTEAQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHG 204 Query: 691 G 693 G Sbjct: 205 G 205 >UniRef50_Q67K17 Cluster: Flagellar-specific ATP synthase; n=1; Symbiobacterium thermophilum|Rep: Flagellar-specific ATP synthase - Symbiobacterium thermophilum Length = 436 Score = 48.0 bits (109), Expect = 2e-04 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +2 Query: 323 DNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 481 D + ++ G ++ G V TG + PVG +LGRV+D LGNPID KGP+ Sbjct: 62 DRLLLMPLGETDGLRPGWDVIATGGPLQAPVGMGLLGRVIDGLGNPIDDKGPL 114 Score = 36.7 bits (81), Expect = 0.59 Identities = 16/46 (34%), Positives = 26/46 (56%) Frame = +1 Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651 AP + R + P+ G++A+D+L+ +G GQR I GK+ L Sbjct: 126 APDPLARQRIHRPLSLGVRALDALITVGMGQRIGIFAGSGVGKSTL 171 >UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondrial precursor; n=3027; cellular organisms|Rep: ATP synthase subunit beta, mitochondrial precursor - Homo sapiens (Human) Length = 529 Score = 48.0 bits (109), Expect = 2e-04 Identities = 21/52 (40%), Positives = 35/52 (67%) Frame = +2 Query: 335 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTK 490 + + G + L++ G V +GA + +PVG + LGR+++ +G PID +GPI TK Sbjct: 111 IAMDGTEGLVR-GQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTK 161 Score = 35.5 bits (78), Expect = 1.4 Identities = 20/61 (32%), Positives = 31/61 (50%) Frame = +1 Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690 +AP + +E + TGIK VD L P +G + + G GKT L ++ I N + + Sbjct: 169 EAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHG 228 Query: 691 G 693 G Sbjct: 229 G 229 >UniRef50_P38168 Cluster: Putative uncharacterized protein YBL100C; n=1; Saccharomyces cerevisiae|Rep: Putative uncharacterized protein YBL100C - Saccharomyces cerevisiae (Baker's yeast) Length = 104 Score = 47.2 bits (107), Expect = 4e-04 Identities = 25/47 (53%), Positives = 30/47 (63%) Frame = -3 Query: 256 VFKP*TRAIPSPMLKTRPVSSRSALGAAPRILSSRMVEISAALWVVE 116 +FKP TRAIPSP +T PVS + A P ILSS+M E S +VE Sbjct: 2 LFKPKTRAIPSPTARTLPVSFKLASSDTPLILSSKMEETSVGCALVE 48 >UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellular organisms|Rep: ATP synthase subunit beta - Zymomonas mobilis Length = 484 Score = 47.2 bits (107), Expect = 4e-04 Identities = 20/51 (39%), Positives = 35/51 (68%) Frame = +2 Query: 353 DKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRV 505 D L++ ++V TG+ + VPVG + LGR+++ +G P+D +GPI +K M + Sbjct: 67 DGLVRGQEVVD-TGSEIRVPVGPETLGRIMNVVGRPVDERGPIGSKQTMPI 116 >UniRef50_Q6BRW4 Cluster: Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces hansenii; n=1; Debaryomyces hansenii|Rep: Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces hansenii - Debaryomyces hansenii (Yeast) (Torulaspora hansenii) Length = 80 Score = 46.8 bits (106), Expect = 6e-04 Identities = 27/74 (36%), Positives = 41/74 (55%) Frame = +3 Query: 3 LISARIAGSVARRLPNAATQVSKXXXXXXXXXSRKLHVSTTHKAAEISTILEERILGAAP 182 ++SAR A R A ++ + + + + ST E+S+ILEERI G + Sbjct: 1 MLSARPVLRSAARSVAAVSRNLRVKQARPTQLAARCYASTKAAPTEVSSILEERIRGVSD 60 Query: 183 KADLEETGRVLSIG 224 +A+L ETGRVLS+G Sbjct: 61 EANLNETGRVLSVG 74 >UniRef50_Q98PM3 Cluster: ATP SYNTHASE BETA CHAIN; n=9; Mycoplasmataceae|Rep: ATP SYNTHASE BETA CHAIN - Mycoplasma pulmonis Length = 468 Score = 46.4 bits (105), Expect = 7e-04 Identities = 23/64 (35%), Positives = 36/64 (56%) Frame = +1 Query: 547 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIY 726 E ++TGIKA+D +PI RG + I+G GKT + + I N +F + +K+K Sbjct: 122 EILETGIKAIDFFIPILRGSKLGILGGAGVGKTVVMKEIIFNASKFKAPQAQKEKKNTSS 181 Query: 727 VVIG 738 + IG Sbjct: 182 IFIG 185 Score = 32.7 bits (71), Expect = 9.7 Identities = 15/53 (28%), Positives = 28/53 (52%) Frame = +2 Query: 314 LEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 472 + D V ++ + + G +V T ++VPVG+ + +V D LGN ++ K Sbjct: 45 ISEDEVRAILIKTSQRVFIGQVVLNTMKKLEVPVGKSSMNKVFDILGNCLNDK 97 >UniRef50_Q9RQ79 Cluster: Beta subunit of membrane-bound ATP synthase; n=8; cellular organisms|Rep: Beta subunit of membrane-bound ATP synthase - Buchnera aphidicola Length = 147 Score = 46.4 bits (105), Expect = 7e-04 Identities = 22/59 (37%), Positives = 32/59 (54%) Frame = +2 Query: 329 VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRV 505 V + G+ +K G IV G + VPVGE LGR+++ LG ID KG + +K + Sbjct: 52 VRTIAMGSSDGLKRGLIVNDLGHYIKVPVGEPTLGRILNVLGETIDNKGLLKSKRNTNI 110 >UniRef50_A5KSP4 Cluster: Sodium-transporting two-sector ATPase; n=1; candidate division TM7 genomosp. GTL1|Rep: Sodium-transporting two-sector ATPase - candidate division TM7 genomosp. GTL1 Length = 495 Score = 46.4 bits (105), Expect = 7e-04 Identities = 22/56 (39%), Positives = 34/56 (60%) Frame = +1 Query: 508 FKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQ 675 ++AP I+ R + E + +G+ AVD+L PI GQR I+GD + GK+ +NQ Sbjct: 138 YEAPSIMERTMLSEQLPSGVTAVDALFPIVLGQRIAILGDTKAGKSTFLGQLGVNQ 193 Score = 35.9 bits (79), Expect = 1.0 Identities = 23/78 (29%), Positives = 37/78 (47%) Frame = +2 Query: 248 LEDIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQI 427 L+ I MV F SG +GM ++ + +V+ + G + I VGE + Sbjct: 52 LDGIAVGAMVLFESGQRGMVRDVNAETA-LVLNLEAETTPLGTLAVLQDNIPTTRVGEGL 110 Query: 428 LGRVVDALGNPIDGKGPI 481 +GR+V L P+D KG + Sbjct: 111 IGRIVTPLCRPLDDKGTV 128 >UniRef50_A3IIS5 Cluster: Putative uncharacterized protein; n=1; Cyanothece sp. CCY 0110|Rep: Putative uncharacterized protein - Cyanothece sp. CCY 0110 Length = 67 Score = 46.4 bits (105), Expect = 7e-04 Identities = 22/33 (66%), Positives = 23/33 (69%) Frame = -1 Query: 486 VSIGPLPSIGFPKASTTRPRICSPTGTSTIAPV 388 V I P PSIG P+ STTRP I SPTGT I PV Sbjct: 34 VLISPFPSIGRPRESTTRPTIASPTGTWAIFPV 66 Score = 33.5 bits (73), Expect = 5.5 Identities = 14/22 (63%), Positives = 18/22 (81%) Frame = -2 Query: 578 STALIPVCIGSRTDTRGMIXGA 513 S A+IPVC+GS+TD R +I GA Sbjct: 3 SIAVIPVCMGSQTDLRAIIPGA 24 >UniRef50_A6DUD8 Cluster: F0F1 ATP synthase subunit beta; n=1; Lentisphaera araneosa HTCC2155|Rep: F0F1 ATP synthase subunit beta - Lentisphaera araneosa HTCC2155 Length = 161 Score = 45.6 bits (103), Expect = 0.001 Identities = 21/68 (30%), Positives = 39/68 (57%) Frame = +2 Query: 302 MALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 481 +A +L V + + + + G +V TGA + VPVG+++LGR ++ LG+PID K + Sbjct: 51 VAQHLGEGVVRTIALDSTEGLHRGAVVTDTGAGLKVPVGDEVLGRAMNLLGDPIDNKPVV 110 Query: 482 DTKSRMRV 505 ++ + Sbjct: 111 ESSDEWEI 118 >UniRef50_Q1GNY4 Cluster: ATPase FliI/YscN; n=6; Bacteria|Rep: ATPase FliI/YscN - Sphingopyxis alaskensis (Sphingomonas alaskensis) Length = 443 Score = 45.2 bits (102), Expect = 0.002 Identities = 22/52 (42%), Positives = 34/52 (65%) Frame = +2 Query: 335 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTK 490 V+ F +K + G V+ GA VPVG+ +LGR++DA GNP+DG+ I ++ Sbjct: 74 VLPFDTNKPLVTGAPVEPHGASSMVPVGKALLGRIMDAQGNPLDGRPAIKSQ 125 Score = 33.1 bits (72), Expect = 7.3 Identities = 18/53 (33%), Positives = 28/53 (52%) Frame = +1 Query: 493 PYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651 P GR P+ RV+ + G++A++ L+ +G GQR II GK+ L Sbjct: 129 PLAGRKVNPLRRGRVT--RALNMGVRAINGLLTVGEGQRVAIIAGSGVGKSVL 179 >UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondrial precursor; n=1793; root|Rep: ATP synthase subunit beta-3, mitochondrial precursor - Arabidopsis thaliana (Mouse-ear cress) Length = 559 Score = 45.2 bits (102), Expect = 0.002 Identities = 22/52 (42%), Positives = 33/52 (63%) Frame = +2 Query: 335 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTK 490 + + G + L++ G V TGA + VPVG LGR+++ LG PID +G I T+ Sbjct: 139 IAMDGTEGLVR-GRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTE 189 Score = 39.5 bits (88), Expect = 0.084 Identities = 21/60 (35%), Positives = 32/60 (53%) Frame = +1 Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 693 AP ++ + +E + TGIK VD L P RG + + G GKT L ++ I N + + G Sbjct: 198 APALVDLATGQEILATGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 257 >UniRef50_Q1IR49 Cluster: ATPase FliI/YscN; n=1; Acidobacteria bacterium Ellin345|Rep: ATPase FliI/YscN - Acidobacteria bacterium (strain Ellin345) Length = 437 Score = 44.4 bits (100), Expect = 0.003 Identities = 24/53 (45%), Positives = 30/53 (56%) Frame = +1 Query: 493 PYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651 P +G AP+ R+ VRE M GI+A+D V GRGQR I G GK+ L Sbjct: 125 PVDG--SAPLPYARIPVREVMPCGIRAIDGFVTCGRGQRIGIFGGSGVGKSTL 175 Score = 37.5 bits (83), Expect = 0.34 Identities = 19/41 (46%), Positives = 25/41 (60%) Frame = +2 Query: 356 KLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGP 478 K I+ GD V + VG++ILGRV+DA G P+DG P Sbjct: 77 KGIRFGDSVVGLAQPPSIAVGDEILGRVLDATGAPLDGITP 117 >UniRef50_O83417 Cluster: Flagellum-specific ATP synthase; n=42; Bacteria|Rep: Flagellum-specific ATP synthase - Treponema pallidum Length = 447 Score = 44.4 bits (100), Expect = 0.003 Identities = 22/48 (45%), Positives = 29/48 (60%) Frame = +2 Query: 362 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRV 505 ++ G V GA + VPVG+ +LGRV++A G IDGKG I R V Sbjct: 80 VEVGCAVVAEGAALSVPVGDALLGRVLNAFGKAIDGKGEIYAPLRSEV 127 Score = 32.7 bits (71), Expect = 9.7 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = +1 Query: 532 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651 R+ + M TG++ +DSL+ +G GQR I GK+ L Sbjct: 137 RLPITRQMVTGVRVLDSLLAVGCGQRLGIFSGSGVGKSTL 176 >UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellular organisms|Rep: ATP synthase subunit beta - Gluconobacter oxydans (Gluconobacter suboxydans) Length = 487 Score = 44.4 bits (100), Expect = 0.003 Identities = 21/51 (41%), Positives = 33/51 (64%) Frame = +2 Query: 353 DKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRV 505 D L++ G V+ TG + VPVG LGR+++ +G PID +GPI ++ R + Sbjct: 73 DGLVR-GTEVRDTGKQIMVPVGPATLGRILNVVGEPIDERGPISSELRFPI 122 Score = 34.3 bits (75), Expect = 3.2 Identities = 23/81 (28%), Positives = 37/81 (45%) Frame = +1 Query: 451 GKPY*WQGTNRHEIPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDR 630 G+P +G E+ + AP + + E + TGIK VD L P +G + + G Sbjct: 105 GEPIDERGPISSELRFPIHRPAPSFEEQAAASEILVTGIKVVDLLCPYLKGGKIGLFGGA 164 Query: 631 QTGKTALAIDTIINQQRFNKG 693 GKT + + I N + + G Sbjct: 165 GVGKTVIIQELINNIAKAHGG 185 >UniRef50_Q1NYL2 Cluster: ATP synthase beta chain; n=1; Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)|Rep: ATP synthase beta chain - Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata) Length = 129 Score = 44.0 bits (99), Expect = 0.004 Identities = 18/48 (37%), Positives = 29/48 (60%) Frame = +2 Query: 362 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRV 505 +K G V G + +P+GE+I GRV + +GN IDG G ++ R+ + Sbjct: 72 LKRGQDVFSLGTTISMPIGEEINGRVFNVVGNTIDGLGDLNNSKRISI 119 >UniRef50_Q12T73 Cluster: ATPase FliI/YscN; n=1; Shewanella denitrificans OS217|Rep: ATPase FliI/YscN - Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) Length = 436 Score = 43.6 bits (98), Expect = 0.005 Identities = 19/42 (45%), Positives = 28/42 (66%) Frame = +1 Query: 526 IPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651 + R ++ EP+ T IKA+DS +PIG+GQR I+ GK+ L Sbjct: 130 LTRAAIDEPLTTRIKALDSFIPIGKGQRVGILAGSGVGKSTL 171 Score = 35.9 bits (79), Expect = 1.0 Identities = 17/53 (32%), Positives = 30/53 (56%) Frame = +2 Query: 308 LNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 466 +++ V ++ F + I GD + +G + +P+G +LG VVDA G P+D Sbjct: 57 ISISETQVKLMPFQSASGISFGDKLIGSGTSIRLPMGSGMLGHVVDAFGQPLD 109 >UniRef50_Q9RQ76 Cluster: Beta subunit of membrane-bound ATP synthase; n=16; Gammaproteobacteria|Rep: Beta subunit of membrane-bound ATP synthase - Buchnera aphidicola Length = 147 Score = 42.7 bits (96), Expect = 0.009 Identities = 22/59 (37%), Positives = 31/59 (52%) Frame = +2 Query: 329 VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRV 505 V + G + G V G + VPVG LGR+V+ LG PID KGP++ K ++ Sbjct: 52 VRTIAMGASDGLSRGLSVLDLGHGIKVPVGISTLGRIVNVLGCPIDMKGPLNNKDGSKI 110 >UniRef50_Q6D5F7 Cluster: Type III secretion protein; n=10; Enterobacteriaceae|Rep: Type III secretion protein - Erwinia carotovora subsp. atroseptica (Pectobacterium atrosepticum) Length = 456 Score = 42.3 bits (95), Expect = 0.012 Identities = 27/68 (39%), Positives = 36/68 (52%) Frame = +1 Query: 469 QGTNRHEIPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTA 648 Q T R + P G P PR+S +P+ TG++AVD L+ IG+GQR I GKT Sbjct: 135 QVTGRTQ-PVLGDAPPPTSRPRIS--QPLPTGLRAVDGLLTIGQGQRVGIFAGAGCGKTT 191 Query: 649 LAIDTIIN 672 L + N Sbjct: 192 LLAELARN 199 >UniRef50_Q02C61 Cluster: ATPase, FliI/YscN family; n=2; Bacteria|Rep: ATPase, FliI/YscN family - Solibacter usitatus (strain Ellin6076) Length = 449 Score = 42.3 bits (95), Expect = 0.012 Identities = 18/42 (42%), Positives = 28/42 (66%) Frame = +1 Query: 526 IPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651 + R + +P+ TGI+A+D+L+P G+GQR I G GK+ L Sbjct: 133 LDRQHITQPLVTGIRAIDALLPCGKGQRIGIFGGSGVGKSTL 174 >UniRef50_A7CYE2 Cluster: Flagellar protein export ATPase FliI; n=1; Opitutaceae bacterium TAV2|Rep: Flagellar protein export ATPase FliI - Opitutaceae bacterium TAV2 Length = 461 Score = 42.3 bits (95), Expect = 0.012 Identities = 18/29 (62%), Positives = 23/29 (79%), Gaps = 1/29 (3%) Frame = +2 Query: 407 VPV-GEQILGRVVDALGNPIDGKGPIDTK 490 +PV G Q+LGRV+DALG P DG GP+ T+ Sbjct: 109 IPVSGAQLLGRVLDALGRPFDGAGPVPTR 137 Score = 39.5 bits (88), Expect = 0.084 Identities = 17/47 (36%), Positives = 28/47 (59%) Frame = +1 Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651 + P + R +RE + TG++A+D+ P+GRGQR + GK+ L Sbjct: 145 RPPHPLRRQRIREALPTGVRALDAFTPLGRGQRLGLFAGSGVGKSTL 191 >UniRef50_P0A1B9 Cluster: Probable ATP synthase spaL; n=32; Proteobacteria|Rep: Probable ATP synthase spaL - Salmonella typhimurium Length = 431 Score = 42.3 bits (95), Expect = 0.012 Identities = 21/45 (46%), Positives = 26/45 (57%) Frame = +1 Query: 517 PIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651 P RV VREP+ TG++A+D L+ G GQR I GKT L Sbjct: 124 PSYASRVGVREPLITGVRAIDGLLTCGVGQRMGIFASAGCGKTML 168 >UniRef50_P55717 Cluster: Probable ATP synthase y4yI; n=27; Bacteria|Rep: Probable ATP synthase y4yI - Rhizobium sp. (strain NGR234) Length = 451 Score = 41.9 bits (94), Expect = 0.016 Identities = 17/36 (47%), Positives = 25/36 (69%) Frame = +2 Query: 380 VKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDT 487 V TG + +VP+G +LGRV+D+ P+DGKG + T Sbjct: 100 VVSTGRMREVPIGPDLLGRVIDSRCRPLDGKGEVKT 135 Score = 36.3 bits (80), Expect = 0.78 Identities = 21/53 (39%), Positives = 28/53 (52%) Frame = +1 Query: 493 PYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651 P GR AP + R V P G++A+D L+ G GQR I G+ GK+ L Sbjct: 140 PLHGR--APNPMTRRMVERPFPLGVRALDGLLTCGEGQRIGIYGEPGGGKSTL 190 >UniRef50_A5D0F3 Cluster: Flagellar biosynthesis/type III secretory pathway ATPase; n=4; Bacteria|Rep: Flagellar biosynthesis/type III secretory pathway ATPase - Pelotomaculum thermopropionicum SI Length = 446 Score = 41.1 bits (92), Expect = 0.028 Identities = 20/45 (44%), Positives = 28/45 (62%) Frame = +2 Query: 347 GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 481 G K I +G V +G + VGE +LGRV++ LG P+DG GP+ Sbjct: 77 GELKGIYQGCSVTPSGRPFTIKVGEGLLGRVLNGLGEPMDGLGPV 121 Score = 36.3 bits (80), Expect = 0.78 Identities = 18/47 (38%), Positives = 26/47 (55%) Frame = +1 Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651 + P + R + E + TG++AVD L+ GRGQR I GK+ L Sbjct: 133 RPPNPLKRRRITEVLSTGVRAVDGLLTCGRGQRIGIFSGSGVGKSTL 179 >UniRef50_Q971B7 Cluster: V-type ATP synthase alpha chain; n=11; Archaea|Rep: V-type ATP synthase alpha chain - Sulfolobus tokodaii Length = 592 Score = 40.7 bits (91), Expect = 0.036 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%) Frame = +2 Query: 248 LEDIQAEEMVEFSS-GLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQ 424 + + Q E+V S L G +E D + V+ + +K GD V R+GA + V +G Sbjct: 20 MREAQMFEVVYVSDLKLVGEITRIEGDRAFIQVYESTDGVKPGDKVYRSGAPLSVELGPG 79 Query: 425 ILGRVVDALGNPID 466 ++G++ D L P+D Sbjct: 80 LIGKIYDGLQRPLD 93 Score = 37.1 bits (82), Expect = 0.45 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 5/61 (8%) Frame = +1 Query: 478 NRHEIPYEGRFKAPIIIPR-----VSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGK 642 N EIP + K P+ IPR + EP+ TGI+ +D++ PI +G I G +GK Sbjct: 181 NGDEIPVKMYQKWPVRIPRPYKEKLEPVEPLLTGIRVLDTVFPIAKGGTAAIPGPFGSGK 240 Query: 643 T 645 T Sbjct: 241 T 241 >UniRef50_Q8F319 Cluster: Flagellum-specific ATP synthase fliI; n=4; Leptospira|Rep: Flagellum-specific ATP synthase fliI - Leptospira interrogans Length = 454 Score = 40.3 bits (90), Expect = 0.048 Identities = 17/34 (50%), Positives = 26/34 (76%) Frame = +2 Query: 389 TGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTK 490 +G + +PVG+++LGRV++ +G PID KG I TK Sbjct: 97 SGRKLAIPVGKELLGRVLNGVGRPIDKKGHIITK 130 Score = 39.1 bits (87), Expect = 0.11 Identities = 17/47 (36%), Positives = 29/47 (61%) Frame = +1 Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651 + P + R +R+ + TG++A+D ++ IGRGQR I GK++L Sbjct: 138 EVPNPLDRPIIRDVLMTGVRAIDGILTIGRGQRVGIFSGSGVGKSSL 184 >UniRef50_Q7UIJ0 Cluster: Flagellum-specific ATP synthase; n=3; Planctomycetaceae|Rep: Flagellum-specific ATP synthase - Rhodopirellula baltica Length = 467 Score = 40.3 bits (90), Expect = 0.048 Identities = 21/68 (30%), Positives = 35/68 (51%) Frame = +1 Query: 448 FGKPY*WQGTNRHEIPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGD 627 FG+P + + + AP + R + EP+QTG++A+D+++ G GQR I Sbjct: 119 FGRPIDGKPLSDDLVRVSASRAAPDSLDRPPIDEPLQTGVRAIDAMLTCGVGQRLGIFAG 178 Query: 628 RQTGKTAL 651 GK+ L Sbjct: 179 SGVGKSTL 186 Score = 37.9 bits (84), Expect = 0.26 Identities = 16/34 (47%), Positives = 22/34 (64%) Frame = +2 Query: 371 GDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 472 GD V+ + + VG+ + GRV+DA G PIDGK Sbjct: 93 GDRVRLVSRSLTLRVGDSLCGRVIDAFGRPIDGK 126 >UniRef50_O07025 Cluster: Flagellum-specific ATP synthase; n=24; Epsilonproteobacteria|Rep: Flagellum-specific ATP synthase - Helicobacter pylori (Campylobacter pylori) Length = 434 Score = 40.3 bits (90), Expect = 0.048 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 2/72 (2%) Frame = +2 Query: 275 VEFSSGLK--GMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDA 448 +E S G + GM + E + G F + + GD V ++ PVG +LGRV++ Sbjct: 46 IEKSDGSECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLLGRVLNP 105 Query: 449 LGNPIDGKGPID 484 LG ID KG +D Sbjct: 106 LGQVIDNKGALD 117 >UniRef50_P23445 Cluster: Flagellum-specific ATP synthase; n=18; Bacteria|Rep: Flagellum-specific ATP synthase - Bacillus subtilis Length = 440 Score = 40.3 bits (90), Expect = 0.048 Identities = 18/58 (31%), Positives = 33/58 (56%) Frame = +2 Query: 293 LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 466 +K + + +N+ ++ + I G IV+ TG + V VG ++G+V+DA G P+D Sbjct: 58 IKAEVVGFQEENILLMPYLEAASIAPGSIVEATGESLRVKVGTGLIGQVIDAFGEPLD 115 Score = 37.9 bits (84), Expect = 0.26 Identities = 22/68 (32%), Positives = 34/68 (50%) Frame = +1 Query: 448 FGKPY*WQGTNRHEIPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGD 627 FG+P + R P P + R +RE M G++++DSL+ +G+GQR I Sbjct: 110 FGEPLD-ESFCRKVSPVSTEQSPPNPMKRPPIREKMGVGVRSIDSLLTVGKGQRIGIFAG 168 Query: 628 RQTGKTAL 651 GK+ L Sbjct: 169 SGVGKSTL 176 >UniRef50_A3WGS0 Cluster: FliI, Flagellum-specific ATPase; n=2; Erythrobacter|Rep: FliI, Flagellum-specific ATPase - Erythrobacter sp. NAP1 Length = 450 Score = 39.9 bits (89), Expect = 0.064 Identities = 20/48 (41%), Positives = 31/48 (64%) Frame = +2 Query: 335 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGP 478 +++ G+ +L++ V+ G+ V VG+ +LGR VD LG PIDG GP Sbjct: 72 MMLLGDAQLLQPRASVRAIGSPGSVRVGDALLGRAVDGLGQPIDG-GP 118 Score = 34.3 bits (75), Expect = 3.2 Identities = 19/47 (40%), Positives = 27/47 (57%) Frame = +1 Query: 526 IPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTI 666 + R V E G++AV++L +G GQR II GK+ L IDT+ Sbjct: 136 LARSGVSESFDCGVRAVNALATMGVGQRMGIIAGSGVGKSVL-IDTV 181 >UniRef50_A6CBM4 Cluster: Transcription termination factor Rho; n=1; Planctomyces maris DSM 8797|Rep: Transcription termination factor Rho - Planctomyces maris DSM 8797 Length = 543 Score = 39.5 bits (88), Expect = 0.084 Identities = 17/37 (45%), Positives = 24/37 (64%) Frame = +1 Query: 550 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAID 660 PM ++ +D L PIG+GQR L++ +TGKT L D Sbjct: 277 PMPITMRIMDMLTPIGKGQRALVVAPPRTGKTMLLQD 313 >UniRef50_Q4IW70 Cluster: ATP synthase F1, beta subunit; n=1; Azotobacter vinelandii AvOP|Rep: ATP synthase F1, beta subunit - Azotobacter vinelandii AvOP Length = 473 Score = 39.1 bits (87), Expect = 0.11 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = +1 Query: 517 PIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTI 666 P + + + EP TGIK +D L P+ +G + + G GKT L ++ I Sbjct: 120 PPLAAQAATSEPFATGIKVIDLLTPLVQGGKAAMFGGAGVGKTVLVMELI 169 Score = 33.5 bits (73), Expect = 5.5 Identities = 17/56 (30%), Positives = 29/56 (51%) Frame = +2 Query: 311 NLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGP 478 +L+ V + + G + + G + VPVGE +LGR++D +G + KGP Sbjct: 50 HLDARRVRAIALAATSGLPRGVMARTLGGPLRVPVGEAVLGRLLD-VGGVVGDKGP 104 >UniRef50_A5IFJ3 Cluster: ATP synthase F1, beta chain; n=3; Legionella pneumophila|Rep: ATP synthase F1, beta chain - Legionella pneumophila (strain Corby) Length = 474 Score = 39.1 bits (87), Expect = 0.11 Identities = 17/59 (28%), Positives = 33/59 (55%) Frame = +2 Query: 311 NLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDT 487 +L+ +V + ++ G IV G + +PV ++ LGR+++ G P+DG P++T Sbjct: 65 HLDEHHVRAITLHRASGLQRGLIVYDQGTSLRIPVSKECLGRLLNIFGEPLDGAPPLET 123 >UniRef50_A7R4X8 Cluster: Chromosome undetermined scaffold_808, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_808, whole genome shotgun sequence - Vitis vinifera (Grape) Length = 106 Score = 39.1 bits (87), Expect = 0.11 Identities = 18/36 (50%), Positives = 24/36 (66%) Frame = +2 Query: 257 IQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLI 364 I A E+VEF G + LNLE +NVGVV+ G+ +I Sbjct: 71 IMASELVEFEEGTIAITLNLESNNVGVVLMGDGLMI 106 >UniRef50_O67531 Cluster: Flagellum-specific ATP synthase; n=2; Aquifex aeolicus|Rep: Flagellum-specific ATP synthase - Aquifex aeolicus Length = 443 Score = 39.1 bits (87), Expect = 0.11 Identities = 20/67 (29%), Positives = 34/67 (50%) Frame = +2 Query: 269 EMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDA 448 E+ S ++G + D V V+ + +++GD V +V G ++G+VVD Sbjct: 52 EIQSNSRRIRGEVIGFSGDKVLVMPYEPVFGLRKGDKVLLKNELVSTKTGNGVVGKVVDP 111 Query: 449 LGNPIDG 469 GNP+DG Sbjct: 112 FGNPLDG 118 >UniRef50_A2WHU5 Cluster: Flagellar biosynthesis/type III secretory pathway ATPase; n=1; Burkholderia dolosa AUO158|Rep: Flagellar biosynthesis/type III secretory pathway ATPase - Burkholderia dolosa AUO158 Length = 390 Score = 38.7 bits (86), Expect = 0.15 Identities = 19/46 (41%), Positives = 27/46 (58%) Frame = +1 Query: 517 PIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALA 654 P I R+ +R TG++A+D L+ G GQR I + TGKT L+ Sbjct: 126 PSIDNRLPIRTRFLTGVRAIDGLMTCGIGQRVGIFAEAGTGKTTLS 171 >UniRef50_Q9PLK9 Cluster: Virulence ATPase, putative; n=9; Chlamydiaceae|Rep: Virulence ATPase, putative - Chlamydia muridarum Length = 434 Score = 38.3 bits (85), Expect = 0.19 Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 2/59 (3%) Frame = +1 Query: 517 PIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTII--NQQRFN 687 P + R ++E TGI+A+D+L+ IG GQR I + GK++L + TI +QQ N Sbjct: 129 PSPMSRTPIQEIFPTGIRAIDALLTIGEGQRVGIFSEPGGGKSSL-LSTIAKGSQQTIN 186 Score = 35.9 bits (79), Expect = 1.0 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = +2 Query: 407 VPVGEQILGRVVDALGNPIDGKGPI 481 +P+ +LGRV+D GNP+DG P+ Sbjct: 92 LPLSHHLLGRVIDGFGNPLDGNPPL 116 >UniRef50_A6DIN5 Cluster: Transcription termination factor Rho; n=1; Lentisphaera araneosa HTCC2155|Rep: Transcription termination factor Rho - Lentisphaera araneosa HTCC2155 Length = 613 Score = 38.3 bits (85), Expect = 0.19 Identities = 16/35 (45%), Positives = 23/35 (65%) Frame = +1 Query: 547 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651 EP ++ +D +VP+G GQR LI+ +TGKT L Sbjct: 348 EPTNHSMRVLDLVVPVGAGQRGLIVAPPRTGKTVL 382 >UniRef50_Q8TUT0 Cluster: V-type ATP synthase beta chain (EC 3.6.3.14) (V-type ATPase subunit B) [Contains: Mka atpB intein]; n=8; cellular organisms|Rep: V-type ATP synthase beta chain (EC 3.6.3.14) (V-type ATPase subunit B) [Contains: Mka atpB intein] - Methanopyrus kandleri Length = 990 Score = 38.3 bits (85), Expect = 0.19 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = +2 Query: 296 KGMALNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 472 +G L D V VF G L V+ TG + +PV +LGR+++ G PIDG Sbjct: 48 RGQVLEARRDAAVVQVFEGTSGLDTTSTKVRFTGETLRIPVSTDLLGRILNGRGEPIDG- 106 Query: 473 GP 478 GP Sbjct: 107 GP 108 >UniRef50_Q8KKY7 Cluster: Type III secretion system ATP synthase protein; n=2; Proteobacteria|Rep: Type III secretion system ATP synthase protein - Rhizobium etli (strain CFN 42 / ATCC 51251) Length = 439 Score = 37.9 bits (84), Expect = 0.26 Identities = 18/51 (35%), Positives = 28/51 (54%) Frame = +1 Query: 526 IPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQ 678 + R +R+P +GI A+D L+ G+GQR I G GK+ L + N + Sbjct: 137 LSRRPIRQPFTSGIAALDGLLTCGQGQRIGIFGAPGAGKSTLVSQIVANNK 187 >UniRef50_A1SEP6 Cluster: ATPase, FliI/YscN family; n=10; Bacteria|Rep: ATPase, FliI/YscN family - Nocardioides sp. (strain BAA-499 / JS614) Length = 435 Score = 37.9 bits (84), Expect = 0.26 Identities = 18/46 (39%), Positives = 27/46 (58%) Frame = +2 Query: 347 GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPID 484 G+ ++ GD V G + +PVGE + GRV+D LG P+D +D Sbjct: 72 GDTTGLRVGDHVVNHGEGLRIPVGEALRGRVLDGLGRPMDDGPALD 117 Score = 34.3 bits (75), Expect = 3.2 Identities = 15/45 (33%), Positives = 27/45 (60%) Frame = +1 Query: 517 PIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651 P + R + + + G++A+D+L+ GRGQR I+ GK++L Sbjct: 129 PAALSRPRIDQQLGLGVRAMDALISCGRGQRLGIMAGSGVGKSSL 173 >UniRef50_P74857 Cluster: Probable secretion system apparatus ATP synthase ssaN; n=17; Gammaproteobacteria|Rep: Probable secretion system apparatus ATP synthase ssaN - Salmonella typhimurium Length = 433 Score = 37.9 bits (84), Expect = 0.26 Identities = 14/22 (63%), Positives = 18/22 (81%) Frame = +2 Query: 407 VPVGEQILGRVVDALGNPIDGK 472 VPVGE +LGRV+D G P+DG+ Sbjct: 91 VPVGEALLGRVIDGFGRPLDGR 112 Score = 36.3 bits (80), Expect = 0.78 Identities = 17/45 (37%), Positives = 25/45 (55%) Frame = +1 Query: 517 PIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651 P + R + +P+ TGI+A+DS+ G GQR I GK+ L Sbjct: 127 PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTL 171 >UniRef50_Q53153 Cluster: FliI protein; n=7; Rhodobacteraceae|Rep: FliI protein - Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides) Length = 442 Score = 37.5 bits (83), Expect = 0.34 Identities = 18/55 (32%), Positives = 31/55 (56%) Frame = +1 Query: 487 EIPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651 E P GR P+ R +V P+ G++A+++ + +G+GQR I+ GK+ L Sbjct: 125 EWPLAGRVMNPLA--RTAVSRPLDVGVRAINAALTVGQGQRIGIVAGSGEGKSVL 177 >UniRef50_Q1FJZ5 Cluster: Transcription termination factor Rho; n=3; Clostridiales|Rep: Transcription termination factor Rho - Clostridium phytofermentans ISDg Length = 650 Score = 37.5 bits (83), Expect = 0.34 Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%) Frame = +1 Query: 532 RVSVREP-MQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651 R+ + P Q ++ VD + PIG+GQR +I+ +TGKT L Sbjct: 373 RIHLETPGCQVAMRMVDLISPIGKGQRGMIVSQPKTGKTTL 413 >UniRef50_A2W3Z6 Cluster: ATPase FliI/YscN; n=1; Burkholderia cenocepacia PC184|Rep: ATPase FliI/YscN - Burkholderia cenocepacia PC184 Length = 386 Score = 37.5 bits (83), Expect = 0.34 Identities = 14/24 (58%), Positives = 18/24 (75%) Frame = +2 Query: 410 PVGEQILGRVVDALGNPIDGKGPI 481 PVGE + GRV+D LG P+D GP+ Sbjct: 27 PVGEALFGRVLDGLGRPLDDLGPV 50 >UniRef50_Q5SJE9 Cluster: Transcription termination factor Rho; n=3; Bacteria|Rep: Transcription termination factor Rho - Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) Length = 426 Score = 37.1 bits (82), Expect = 0.45 Identities = 16/34 (47%), Positives = 21/34 (61%) Frame = +1 Query: 550 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651 P + + +D L PIGRGQR LI+ + GKT L Sbjct: 160 PDELSTRVIDLLAPIGRGQRGLIVAPPKAGKTTL 193 >UniRef50_Q55738 Cluster: DNA gyrase subunit A; n=37; Cyanobacteria|Rep: DNA gyrase subunit A - Synechocystis sp. (strain PCC 6803) Length = 860 Score = 37.1 bits (82), Expect = 0.45 Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 5/60 (8%) Frame = +2 Query: 272 MVEFSSGLK-GMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIV----DVPVGEQILGR 436 ++ SSG+ GMA N+ P N+G V+ G LI+ +I ++ + D P G QILGR Sbjct: 168 LINGSSGIAVGMATNIPPHNLGEVIDGAIALIRNPEITEQELMQIIPGPDFPTGAQILGR 227 >UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellular organisms|Rep: ATP synthase subunit beta - Fervidobacterium islandicum Length = 472 Score = 37.1 bits (82), Expect = 0.45 Identities = 18/49 (36%), Positives = 29/49 (59%) Frame = +2 Query: 335 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 481 V + D L++ G V+ TG + PVG +LGR+ + +G PID +G + Sbjct: 60 VAMDSTDGLVR-GLEVENTGEPIKAPVGRGVLGRMFNVIGEPIDEQGEL 107 Score = 34.3 bits (75), Expect = 3.2 Identities = 17/53 (32%), Positives = 28/53 (52%) Frame = +1 Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIIN 672 AP + + + E ++TG+K +D L P +G + G GKT L ++ I N Sbjct: 119 APSMTEQKTEIEILETGLKVIDLLAPFPKGGKIGFFGGAGVGKTVLVMEMIRN 171 >UniRef50_Q74G36 Cluster: Flagellum-specific ATP synthase FliI; n=15; Bacteria|Rep: Flagellum-specific ATP synthase FliI - Geobacter sulfurreducens Length = 441 Score = 36.7 bits (81), Expect = 0.59 Identities = 19/34 (55%), Positives = 23/34 (67%) Frame = +2 Query: 380 VKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 481 VKR A + VG +LGRV+D LG PID KGP+ Sbjct: 87 VKRKKA--SLGVGPGLLGRVIDGLGVPIDDKGPL 118 Score = 34.7 bits (76), Expect = 2.4 Identities = 15/40 (37%), Positives = 25/40 (62%) Frame = +1 Query: 532 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651 R +R+P+ GI+A+++L+ G GQR I+ GK+ L Sbjct: 136 RRPIRQPLDLGIRAINALLTCGEGQRVGIMAGSGVGKSTL 175 >UniRef50_Q62EB7 Cluster: ATP synthase F1, beta subunit; n=27; Bacteria|Rep: ATP synthase F1, beta subunit - Burkholderia mallei (Pseudomonas mallei) Length = 534 Score = 36.7 bits (81), Expect = 0.59 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = +1 Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTI 666 AP++ + S TGIK +D L P+ +G + + G GKT ++ I Sbjct: 149 APLLAEQKSANALFATGIKVIDLLAPLAQGGKAAMFGGAGVGKTVFVMELI 199 Score = 34.3 bits (75), Expect = 3.2 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +2 Query: 362 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 466 ++ G V+ TG + VPVG+ +LGR++ G P D Sbjct: 97 LRRGAAVRATGGPIRVPVGDAVLGRLLSVTGAPGD 131 >UniRef50_A3Z0H3 Cluster: V-type ATPase, A subunit; n=5; Bacteria|Rep: V-type ATPase, A subunit - Synechococcus sp. WH 5701 Length = 621 Score = 36.7 bits (81), Expect = 0.59 Identities = 19/59 (32%), Positives = 31/59 (52%) Frame = +2 Query: 293 LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDG 469 LK L + VF + + + GD V++TG ++ V +G +L +V D L NP+ G Sbjct: 51 LKAEVLRVHGSTADAQVFESTRGVGIGDPVEQTGELLSVKLGPGLLTQVYDGLQNPLAG 109 >UniRef50_Q98QB6 Cluster: ATP synthase subunit beta 2; n=5; Mycoplasma|Rep: ATP synthase subunit beta 2 - Mycoplasma pulmonis Length = 468 Score = 36.7 bits (81), Expect = 0.59 Identities = 21/56 (37%), Positives = 27/56 (48%) Frame = +1 Query: 538 SVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEK 705 S E + TGIK +D VPI +G + I G GKT + + I N R D K Sbjct: 117 SDNEIINTGIKIIDFFVPIIKGSKIGIFGGAGVGKTIIIKELIFNISRQRDSNDVK 172 >UniRef50_UPI00004D9CFE Cluster: FH1/FH2 domain-containing protein 3 (Formin homolog overexpressed in spleen 2) (hFHOS2) (Formactin-2).; n=3; Xenopus tropicalis|Rep: FH1/FH2 domain-containing protein 3 (Formin homolog overexpressed in spleen 2) (hFHOS2) (Formactin-2). - Xenopus tropicalis Length = 1524 Score = 36.3 bits (80), Expect = 0.78 Identities = 19/36 (52%), Positives = 24/36 (66%) Frame = +1 Query: 82 PQWPWHLANYMSQPPTKLPRSPPSSKRGSLEPRPRL 189 P+WP S PPT+L +SPPSS R S +P+PRL Sbjct: 390 PEWP-------SPPPTRLAQSPPSSSRPS-QPQPRL 417 >UniRef50_Q9FC33 Cluster: Putative transcription terminator factor; n=2; Streptomyces|Rep: Putative transcription terminator factor - Streptomyces coelicolor Length = 415 Score = 36.3 bits (80), Expect = 0.78 Identities = 15/28 (53%), Positives = 20/28 (71%) Frame = +1 Query: 568 KAVDSLVPIGRGQRELIIGDRQTGKTAL 651 + VD L P+G+GQR LI+ +TGKT L Sbjct: 152 RVVDLLAPVGKGQRGLIVAPPKTGKTVL 179 >UniRef50_Q058C4 Cluster: Flagellum-specific ATP synthase; n=1; Buchnera aphidicola str. Cc (Cinara cedri)|Rep: Flagellum-specific ATP synthase - Buchnera aphidicola subsp. Cinara cedri Length = 457 Score = 36.3 bits (80), Expect = 0.78 Identities = 19/70 (27%), Positives = 32/70 (45%) Frame = +2 Query: 290 GLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDG 469 G K L P +F K+ E I + P G ++LGRV++ G+P+D Sbjct: 71 GFKKKIFFLIPIQNSYGIFPGAKVFSENYIFNKDIKFQYFPFGSKLLGRVLNGFGHPLDN 130 Query: 470 KGPIDTKSRM 499 G ++ K ++ Sbjct: 131 LGDLNLKKKL 140 Score = 34.3 bits (75), Expect = 3.2 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Frame = +1 Query: 511 KAPII-IPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651 K PI + R + E + TG+ A++SL+ +GRGQR I GK+ L Sbjct: 146 KKPINPLNRKPITEILDTGVCAINSLLTVGRGQRMGIFSQAGIGKSML 193 >UniRef50_A7M2K2 Cluster: Putative uncharacterized protein; n=1; Bacteroides ovatus ATCC 8483|Rep: Putative uncharacterized protein - Bacteroides ovatus ATCC 8483 Length = 765 Score = 36.3 bits (80), Expect = 0.78 Identities = 16/31 (51%), Positives = 20/31 (64%) Frame = +1 Query: 568 KAVDSLVPIGRGQRELIIGDRQTGKTALAID 660 + VD PIG+GQR LI+ +TGKT L D Sbjct: 507 RVVDLFAPIGKGQRALIVAQPKTGKTILMKD 537 >UniRef50_P52607 Cluster: Flagellum-specific ATP synthase; n=3; Borrelia burgdorferi group|Rep: Flagellum-specific ATP synthase - Borrelia burgdorferi (Lyme disease spirochete) Length = 436 Score = 36.3 bits (80), Expect = 0.78 Identities = 15/38 (39%), Positives = 26/38 (68%) Frame = +2 Query: 362 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKG 475 I+ G+ V +++ + +++LGRV+D+LG PID KG Sbjct: 78 IEVGNKVYSLNKGLEINLSDELLGRVIDSLGRPIDNKG 115 >UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5; Bacteroides|Rep: ATP synthase subunit beta - Bacteroides fragilis Length = 505 Score = 36.3 bits (80), Expect = 0.78 Identities = 18/49 (36%), Positives = 29/49 (59%) Frame = +2 Query: 323 DNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDG 469 + V V + ++ G V TG + +PVGEQI GR+++ +G+ IDG Sbjct: 57 NTVRTVAMDSTDGLQRGMKVFPTGGPITMPVGEQIKGRLMNVVGDSIDG 105 Score = 35.5 bits (78), Expect = 1.4 Identities = 18/52 (34%), Positives = 29/52 (55%) Frame = +1 Query: 538 SVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 693 +V+E + TGIK +D L P +G + + G GKT L ++ I N + + G Sbjct: 129 TVQEVLFTGIKVIDLLEPYSKGGKIGLFGGAGVGKTVLIMELINNIAKKHNG 180 >UniRef50_UPI00015B5329 Cluster: PREDICTED: similar to GA14484-PA; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to GA14484-PA - Nasonia vitripennis Length = 341 Score = 35.9 bits (79), Expect = 1.0 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Frame = +2 Query: 299 GMALNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKG 475 G L + V VF G + + + TG I+ PV E +LGRV + G PID KG Sbjct: 68 GQVLEVSGSKAVVQVFEGTSGIDAKNTHCEFTGDILRTPVSEDMLGRVFNGSGKPID-KG 126 Query: 476 P 478 P Sbjct: 127 P 127 >UniRef50_Q8F7C5 Cluster: Transcription termination factor rho; n=54; cellular organisms|Rep: Transcription termination factor rho - Leptospira interrogans Length = 482 Score = 35.9 bits (79), Expect = 1.0 Identities = 15/35 (42%), Positives = 22/35 (62%) Frame = +1 Query: 547 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651 +P + +D + PIG+GQR LI+ +TGKT L Sbjct: 216 DPSMLDTRILDLMCPIGKGQRALIVAPPRTGKTIL 250 >UniRef50_Q0EZL2 Cluster: Flagellum-specific ATP synthase; n=1; Mariprofundus ferrooxydans PV-1|Rep: Flagellum-specific ATP synthase - Mariprofundus ferrooxydans PV-1 Length = 471 Score = 35.9 bits (79), Expect = 1.0 Identities = 16/40 (40%), Positives = 24/40 (60%) Frame = +2 Query: 347 GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 466 G+ + I GD ++ + VG +LGRV+DA GNP+D Sbjct: 80 GSTRGIAPGDPIEPLSTTPSIRVGPHLLGRVLDAQGNPMD 119 Score = 35.9 bits (79), Expect = 1.0 Identities = 15/40 (37%), Positives = 25/40 (62%) Frame = +1 Query: 532 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651 R ++ PMQ G++A+D+ +P+G GQR + GK+ L Sbjct: 142 RHTIDAPMQLGVRAIDACMPMGWGQRMGLFAGAGVGKSTL 181 >UniRef50_P15313 Cluster: Vacuolar ATP synthase subunit B, kidney isoform; n=451; cellular organisms|Rep: Vacuolar ATP synthase subunit B, kidney isoform - Homo sapiens (Human) Length = 513 Score = 35.9 bits (79), Expect = 1.0 Identities = 17/31 (54%), Positives = 21/31 (67%) Frame = +2 Query: 389 TGAIVDVPVGEQILGRVVDALGNPIDGKGPI 481 TG I+ PV E +LGRV + G PID KGP+ Sbjct: 109 TGDILRTPVSEDMLGRVFNGSGKPID-KGPV 138 >UniRef50_P38606 Cluster: Vacuolar ATP synthase catalytic subunit A; n=209; cellular organisms|Rep: Vacuolar ATP synthase catalytic subunit A - Homo sapiens (Human) Length = 617 Score = 35.9 bits (79), Expect = 1.0 Identities = 19/59 (32%), Positives = 29/59 (49%) Frame = +2 Query: 287 SGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPI 463 S L G + LE D + V+ + GD V RTG + V +G I+G + D + P+ Sbjct: 48 SELVGEIIRLEGDMATIQVYEETSGVSVGDPVLRTGKPLSVELGPGIMGAIFDGIQRPL 106 >UniRef50_P84582 Cluster: ATP synthase subunit alpha; n=1; Populus euphratica|Rep: ATP synthase subunit alpha - Populus euphratica (Euphrates poplar) Length = 98 Score = 35.9 bits (79), Expect = 1.0 Identities = 17/38 (44%), Positives = 25/38 (65%) Frame = +2 Query: 359 LIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 472 +++ GD + R I +PV E LGRV++AL PIDG+ Sbjct: 7 VLQVGDGIAR---IAQIPVSEAYLGRVINALAKPIDGR 41 >UniRef50_UPI0000E823B4 Cluster: PREDICTED: similar to vacuolar proton-ATPase A-subunit, partial; n=2; Gallus gallus|Rep: PREDICTED: similar to vacuolar proton-ATPase A-subunit, partial - Gallus gallus Length = 262 Score = 35.5 bits (78), Expect = 1.4 Identities = 19/57 (33%), Positives = 29/57 (50%) Frame = +2 Query: 293 LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPI 463 L G + LE D + V+ ++ GD V RTG + V +G ILG + D + P+ Sbjct: 50 LVGEIIRLEGDMATLQVYEETSGLRVGDPVLRTGQPLSVELGPGILGSIFDGIQRPL 106 >UniRef50_Q6KIC3 Cluster: ATP synthase beta chain; n=1; Mycoplasma mobile|Rep: ATP synthase beta chain - Mycoplasma mobile Length = 784 Score = 35.5 bits (78), Expect = 1.4 Identities = 18/69 (26%), Positives = 38/69 (55%) Frame = +1 Query: 487 EIPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTI 666 E+ ++ ++ P+ ++ ++TGIK +D L+PI +G + ++G GKT + + I Sbjct: 410 EMQHDSEATRYVVSPKNAI---LETGIKVIDVLLPIPKGGKTGLLGGAGVGKTVIVQELI 466 Query: 667 INQQRFNKG 693 +F+ G Sbjct: 467 NAFIKFHDG 475 Score = 33.1 bits (72), Expect = 7.3 Identities = 15/46 (32%), Positives = 25/46 (54%) Frame = +2 Query: 329 VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 466 V V GN+ +K G VK + + +++LGRV+D +G +D Sbjct: 349 VSTFVLGNETGLKIGTKVKSKNQSYAIKISKRLLGRVIDPIGKILD 394 >UniRef50_Q2IQ94 Cluster: Sodium-transporting two-sector ATPase; n=3; Bacteria|Rep: Sodium-transporting two-sector ATPase - Anaeromyxobacter dehalogenans (strain 2CP-C) Length = 475 Score = 35.5 bits (78), Expect = 1.4 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Frame = +2 Query: 299 GMALNLEPDNVGVVVFGNDK-LIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKG 475 G + L D + V V + L V TG + + V +LGRV+D LG P DG Sbjct: 51 GQVIALSRDRIAVQVLEETRGLAPARSEVTLTGQVARLGVARGMLGRVLDGLGRPADGLP 110 Query: 476 P 478 P Sbjct: 111 P 111 >UniRef50_A0Z379 Cluster: ATPase FliI/YscN; n=1; marine gamma proteobacterium HTCC2080|Rep: ATPase FliI/YscN - marine gamma proteobacterium HTCC2080 Length = 477 Score = 35.5 bits (78), Expect = 1.4 Identities = 17/52 (32%), Positives = 29/52 (55%) Frame = +2 Query: 323 DNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGP 478 D + ++ G+ + ++ G V+ +PVG +LGRV+D G P+DG P Sbjct: 76 DRLVMMCEGSAEGLRPGARVEPLEGSDRIPVGPGLLGRVIDGAGRPLDGFSP 127 Score = 35.1 bits (77), Expect = 1.8 Identities = 17/54 (31%), Positives = 32/54 (59%) Frame = +1 Query: 490 IPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651 +P +G P+ R ++++P+ GI+A++SL+ + RGQR + GK+ L Sbjct: 134 VPMQGEPLNPM--DRGALQKPLDVGIRAINSLLTVARGQRIGLFAGSGVGKSTL 185 >UniRef50_Q8ZXR2 Cluster: V-type ATP synthase beta chain; n=5; Archaea|Rep: V-type ATP synthase beta chain - Pyrobaculum aerophilum Length = 467 Score = 35.5 bits (78), Expect = 1.4 Identities = 17/46 (36%), Positives = 26/46 (56%) Frame = +2 Query: 329 VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 466 V V+ G L +G V+ G + +PV EQ++GR++D G P D Sbjct: 56 VAQVLGGTLGLPAKGSTVRFYGKTLKIPVSEQLIGRILDGKGQPRD 101 >UniRef50_A3ZQF8 Cluster: Transcription termination factor Rho; n=2; Planctomycetaceae|Rep: Transcription termination factor Rho - Blastopirellula marina DSM 3645 Length = 444 Score = 35.1 bits (77), Expect = 1.8 Identities = 14/28 (50%), Positives = 20/28 (71%) Frame = +1 Query: 568 KAVDSLVPIGRGQRELIIGDRQTGKTAL 651 + VD L P+G+GQR L++ +TGKT L Sbjct: 181 RIVDLLTPLGKGQRALVVAPPRTGKTML 208 >UniRef50_A7DBR8 Cluster: Transport system permease protein; n=3; Proteobacteria|Rep: Transport system permease protein - Methylobacterium extorquens PA1 Length = 896 Score = 34.7 bits (76), Expect = 2.4 Identities = 19/46 (41%), Positives = 26/46 (56%) Frame = +3 Query: 132 AAEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKTSRLR 269 A +I+ IL LG AP L ++S+GD AR G++T RLR Sbjct: 755 AGDIAAILPAMALGLAPLVLLRWRVNLMSLGDEEARALGVETRRLR 800 >UniRef50_Q25691 Cluster: Vacuolar ATP synthase subunit B; n=25; Eukaryota|Rep: Vacuolar ATP synthase subunit B - Plasmodium falciparum Length = 494 Score = 34.7 bits (76), Expect = 2.4 Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Frame = +2 Query: 296 KGMALNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 472 +G L + + VF G + + V+ +G I+ +P+ +++LGRV + G PID K Sbjct: 68 QGQILEVCGKKAVIQVFEGTSGIDNKNSYVEVSGDILKMPMSDEMLGRVFNGSGKPID-K 126 Query: 473 GP 478 GP Sbjct: 127 GP 128 >UniRef50_P45835 Cluster: Transcription termination factor rho; n=87; Bacteria|Rep: Transcription termination factor rho - Mycobacterium leprae Length = 610 Score = 34.7 bits (76), Expect = 2.4 Identities = 14/37 (37%), Positives = 23/37 (62%) Frame = +1 Query: 550 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAID 660 P + + +D ++PIG+GQR LI+ + GKT + D Sbjct: 337 PDRLTTRVIDLIMPIGKGQRALIVSPPKAGKTTILQD 373 >UniRef50_Q4RR34 Cluster: Chromosome 14 SCAF15003, whole genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 14 SCAF15003, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer) Length = 590 Score = 34.3 bits (75), Expect = 3.2 Identities = 16/52 (30%), Positives = 27/52 (51%) Frame = +1 Query: 496 YEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651 + G I+ R+S + P + D + IG+G L++G+ TGKT+L Sbjct: 366 HAGPVDTAFIVDRLSYKSPFADELLVEDLSLRIGQGAHVLVVGNTGTGKTSL 417 >UniRef50_Q8NR58 Cluster: Transcription termination factor; n=3; Corynebacterium|Rep: Transcription termination factor - Corynebacterium glutamicum (Brevibacterium flavum) Length = 762 Score = 34.3 bits (75), Expect = 3.2 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = +1 Query: 568 KAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGE 696 + +D ++PIG+GQR LI+ + GKT + + I N N E Sbjct: 490 RVIDLIMPIGKGQRALIVSPPKAGKTTI-LQNIANAISTNNPE 531 >UniRef50_A7CZI2 Cluster: H+transporting two-sector ATPase alpha/beta subunit central region; n=1; Opitutaceae bacterium TAV2|Rep: H+transporting two-sector ATPase alpha/beta subunit central region - Opitutaceae bacterium TAV2 Length = 403 Score = 34.3 bits (75), Expect = 3.2 Identities = 15/31 (48%), Positives = 20/31 (64%) Frame = +1 Query: 568 KAVDSLVPIGRGQRELIIGDRQTGKTALAID 660 +AVD P+G+G R LI+ +TGKT L D Sbjct: 146 RAVDLFCPVGKGTRGLIVAPPRTGKTTLLRD 176 >UniRef50_A1EBU5 Cluster: SctN; n=1; Lysobacter enzymogenes|Rep: SctN - Lysobacter enzymogenes Length = 450 Score = 34.3 bits (75), Expect = 3.2 Identities = 15/29 (51%), Positives = 20/29 (68%) Frame = +2 Query: 389 TGAIVDVPVGEQILGRVVDALGNPIDGKG 475 TG V GE +LGR++DA G+ IDG+G Sbjct: 102 TGRQASVRCGEGLLGRILDANGDAIDGRG 130 >UniRef50_Q9PK86 Cluster: V-type ATP synthase beta chain; n=19; Bacteria|Rep: V-type ATP synthase beta chain - Chlamydia muridarum Length = 438 Score = 34.3 bits (75), Expect = 3.2 Identities = 18/55 (32%), Positives = 27/55 (49%) Frame = +2 Query: 308 LNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 472 L + V + VFG + GD V G ++V G+ +LGR + G PID + Sbjct: 44 LRFDAKKVTLQVFGGTSGLSTGDKVVFLGRPMEVVYGDSLLGRRFNGTGKPIDNE 98 >UniRef50_P52157 Cluster: Transcription termination factor rho; n=14; Bacteria|Rep: Transcription termination factor rho - Streptomyces lividans Length = 707 Score = 34.3 bits (75), Expect = 3.2 Identities = 17/43 (39%), Positives = 25/43 (58%) Frame = +1 Query: 568 KAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGE 696 + +D + PIG+GQR LI+ +TGKT + + I N N E Sbjct: 440 RIIDLVAPIGKGQRGLIVAPPKTGKT-MIMQAIANAITHNNPE 481 >UniRef50_O67031 Cluster: Transcription termination factor rho; n=251; Bacteria|Rep: Transcription termination factor rho - Aquifex aeolicus Length = 436 Score = 34.3 bits (75), Expect = 3.2 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +1 Query: 547 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651 +P + + V + PIG+GQR LI+ + GKT L Sbjct: 169 DPNELSTRVVSLIAPIGKGQRGLIVAPPKAGKTVL 203 >UniRef50_Q08637 Cluster: V-type sodium ATP synthase subunit B (EC 3.6.3.15) (Na(+)- translocating ATPase subunit B); n=14; cellular organisms|Rep: V-type sodium ATP synthase subunit B (EC 3.6.3.15) (Na(+)- translocating ATPase subunit B) - Enterococcus hirae Length = 458 Score = 34.3 bits (75), Expect = 3.2 Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 5/79 (6%) Frame = +2 Query: 257 IQAEEMVE--FSSG--LKGMALNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGE 421 ++ EE++E +G +G L ++ D V +F G + + V+ G + + V E Sbjct: 24 VKYEELIEVRMQNGEIRRGQVLEVQEDKAMVQIFEGTSGINLKNSSVRFLGHPLQLGVSE 83 Query: 422 QILGRVVDALGNPIDGKGP 478 ++GRV D LG P D GP Sbjct: 84 DMIGRVFDGLGRPKD-NGP 101 >UniRef50_Q52371 Cluster: Type III secretion ATP synthase hrcN; n=18; Pseudomonas|Rep: Type III secretion ATP synthase hrcN - Pseudomonas syringae pv. syringae Length = 449 Score = 34.3 bits (75), Expect = 3.2 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 6/81 (7%) Frame = +1 Query: 448 FGKPY*WQGTNRHEIPYEGRFKAPII---IP---RVSVREPMQTGIKAVDSLVPIGRGQR 609 FG+P P + R P+I +P R + + TGI+A+DS + +G GQR Sbjct: 111 FGRPLMGDCLGAFAGPEDRRTTLPVIADALPPTQRPRITRALPTGIRAIDSAILLGEGQR 170 Query: 610 ELIIGDRQTGKTALAIDTIIN 672 + GKT L + N Sbjct: 171 VGLFAGAGCGKTTLMAELARN 191 >UniRef50_P26465 Cluster: Flagellum-specific ATP synthase; n=258; cellular organisms|Rep: Flagellum-specific ATP synthase - Salmonella typhimurium Length = 456 Score = 34.3 bits (75), Expect = 3.2 Identities = 13/42 (30%), Positives = 25/42 (59%) Frame = +1 Query: 526 IPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651 + R + + TG++A+++L+ +GRGQR + GK+ L Sbjct: 150 LQRTPIEHVLDTGVRAINALLTVGRGQRMGLFAGSGVGKSVL 191 >UniRef50_UPI00005F655A Cluster: COG1157: Flagellar biosynthesis/type III secretory pathway ATPase; n=1; Yersinia pestis Angola|Rep: COG1157: Flagellar biosynthesis/type III secretory pathway ATPase - Yersinia pestis Angola Length = 389 Score = 33.9 bits (74), Expect = 4.2 Identities = 12/23 (52%), Positives = 18/23 (78%) Frame = +2 Query: 413 VGEQILGRVVDALGNPIDGKGPI 481 +G+ LGRV++ LG P+DGKG + Sbjct: 97 IGDSWLGRVINGLGEPLDGKGQL 119 Score = 33.5 bits (73), Expect = 5.5 Identities = 18/67 (26%), Positives = 33/67 (49%) Frame = +1 Query: 451 GKPY*WQGTNRHEIPYEGRFKAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDR 630 G+P +G P + + + R +V P+ G+ A++ L+ IG+GQR ++ Sbjct: 110 GEPLDGKGQLGGSTPLQQQLPQIHPLQRRAVDTPLDVGVNAINGLLTIGKGQRVGLMAGS 169 Query: 631 QTGKTAL 651 GK+ L Sbjct: 170 GVGKSVL 176 >UniRef50_Q9MTQ2 Cluster: ATP synthase subunit beta; n=2; Amphidinium|Rep: ATP synthase subunit beta - Amphidinium operculatum (Dinoflagellate) Length = 548 Score = 33.9 bits (74), Expect = 4.2 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Frame = +1 Query: 535 VSVREPM-QTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIIN 672 + + P+ +TGIK VD L P +G + + G GKT L ++ I N Sbjct: 201 IDITAPLFETGIKVVDVLTPYKKGGKVGLFGGAGVGKTVLIMELIRN 247 >UniRef50_A6RD01 Cluster: Putative uncharacterized protein; n=1; Ajellomyces capsulatus NAm1|Rep: Putative uncharacterized protein - Ajellomyces capsulatus NAm1 Length = 762 Score = 33.9 bits (74), Expect = 4.2 Identities = 22/67 (32%), Positives = 32/67 (47%) Frame = +1 Query: 538 SVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLY 717 S RE Q + VP Q I G Q G +A D I+NQQRF+ G++ + L Sbjct: 614 STREAHQLHLNVERIRVPETVFQPSAIAGLDQAGLVEIAAD-IVNQQRFSSGQERARLLR 672 Query: 718 CIYVVIG 738 +++ G Sbjct: 673 DVFITGG 679 >UniRef50_Q141X8 Cluster: ATPase FliI/YscN; n=1; Burkholderia xenovorans LB400|Rep: ATPase FliI/YscN - Burkholderia xenovorans (strain LB400) Length = 444 Score = 33.5 bits (73), Expect = 5.5 Identities = 14/19 (73%), Positives = 17/19 (89%) Frame = +2 Query: 425 ILGRVVDALGNPIDGKGPI 481 +LGRVVD LGNP+DG GP+ Sbjct: 102 LLGRVVDGLGNPLDG-GPV 119 >UniRef50_A6VWI3 Cluster: H+transporting two-sector ATPase alpha/beta subunit central region; n=4; Gammaproteobacteria|Rep: H+transporting two-sector ATPase alpha/beta subunit central region - Marinomonas sp. MWYL1 Length = 318 Score = 33.5 bits (73), Expect = 5.5 Identities = 14/32 (43%), Positives = 21/32 (65%) Frame = +1 Query: 556 QTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651 Q ++A+D + PIG GQR LI+ +GKT + Sbjct: 55 QRTVRAMDLITPIGMGQRGLIVAPPGSGKTTM 86 >UniRef50_A3SFS3 Cluster: Flagellum-specific ATP synthase; n=2; Sulfitobacter|Rep: Flagellum-specific ATP synthase - Sulfitobacter sp. EE-36 Length = 463 Score = 33.5 bits (73), Expect = 5.5 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%) Frame = +1 Query: 505 RFKA--PIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651 RF+A P R V E ++T IK +D PI RGQR + GK+ + Sbjct: 126 RFRANPPGAFDRKKVGEKLETQIKCIDIFTPICRGQRMGVFAGSGVGKSTM 176 >UniRef50_A1T0I0 Cluster: ATPase, FliI/YscN family protein; n=1; Psychromonas ingrahamii 37|Rep: ATPase, FliI/YscN family protein - Psychromonas ingrahamii (strain 37) Length = 436 Score = 33.5 bits (73), Expect = 5.5 Identities = 13/43 (30%), Positives = 25/43 (58%) Frame = +1 Query: 523 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651 I+ + + EP GIK+++ L+ + +GQR ++ GK+ L Sbjct: 129 ILKKKPISEPFDVGIKSINGLLTLAKGQRVGLVAGSGVGKSVL 171 >UniRef50_Q85X23 Cluster: ORF56b; n=1; Pinus koraiensis|Rep: ORF56b - Pinus koraiensis (Korean pine) Length = 56 Score = 33.5 bits (73), Expect = 5.5 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = -1 Query: 483 SIGPLPSIGFPKASTTRPRICSPTGTSTIAPV 388 S GP S G P+ RPR+ PTGT APV Sbjct: 4 STGPKLSTGSPRTLKIRPRVAPPTGTLRGAPV 35 >UniRef50_A5B5Q4 Cluster: Putative uncharacterized protein; n=1; Vitis vinifera|Rep: Putative uncharacterized protein - Vitis vinifera (Grape) Length = 1855 Score = 33.5 bits (73), Expect = 5.5 Identities = 17/42 (40%), Positives = 24/42 (57%) Frame = +1 Query: 52 LLPRCQRWRYPQWPWHLANYMSQPPTKLPRSPPSSKRGSLEP 177 L+ R RW YP +PW L++Y S+ L + PSS R +P Sbjct: 1567 LMERWARWEYPVFPWILSDYSSK---YLDLADPSSYRDLSKP 1605 >UniRef50_UPI00015B4CD4 Cluster: PREDICTED: similar to ENSANGP00000024697; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to ENSANGP00000024697 - Nasonia vitripennis Length = 1018 Score = 33.1 bits (72), Expect = 7.3 Identities = 15/57 (26%), Positives = 29/57 (50%) Frame = +2 Query: 293 LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPI 463 L G + L D+ + V+ + + GD V+RTG + + + +LG + D + P+ Sbjct: 449 LLGEVIRLNGDSATIQVYEDTSGLAVGDPVRRTGRPLSIELAPGLLGSIFDGIQRPL 505 >UniRef50_Q8A876 Cluster: V-type ATP synthase subunit B; n=9; Bacteroidales|Rep: V-type ATP synthase subunit B - Bacteroides thetaiotaomicron Length = 441 Score = 33.1 bits (72), Expect = 7.3 Identities = 22/74 (29%), Positives = 34/74 (45%) Frame = +2 Query: 287 SGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 466 +G + + D+V + VF + I V G + V EQ+ GR +A G+PID Sbjct: 37 NGKLAQVVKIAGDDVTLQVFEGTEGIPTNAEVVFLGKSPTLKVSEQLAGRFFNAFGDPID 96 Query: 467 GKGPIDTKSRMRVG 508 G GP + +G Sbjct: 97 G-GPEIEGQEVEIG 109 >UniRef50_Q81SH1 Cluster: Flagellum-specific ATP synthase, putative; n=20; Bacillales|Rep: Flagellum-specific ATP synthase, putative - Bacillus anthracis Length = 434 Score = 33.1 bits (72), Expect = 7.3 Identities = 15/40 (37%), Positives = 24/40 (60%) Frame = +1 Query: 532 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651 R + + +TGIK++DS++ IG GQ+ I GK+ L Sbjct: 135 REEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKSTL 174 >UniRef50_Q5LWX0 Cluster: H+-transporting two-sector ATPase, flagellum-specific; n=17; Rhodobacteraceae|Rep: H+-transporting two-sector ATPase, flagellum-specific - Silicibacter pomeroyi Length = 445 Score = 33.1 bits (72), Expect = 7.3 Identities = 16/45 (35%), Positives = 27/45 (60%) Frame = +1 Query: 517 PIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651 P + R + + M TG+ A+++L+PI RGQR + GK++L Sbjct: 132 PPAVQRKPLGQRMATGLAALNTLLPIVRGQRVGLFAGSGVGKSSL 176 >UniRef50_Q2SEY6 Cluster: Flagellum-specific ATP synthase; n=1; Hahella chejuensis KCTC 2396|Rep: Flagellum-specific ATP synthase - Hahella chejuensis (strain KCTC 2396) Length = 416 Score = 33.1 bits (72), Expect = 7.3 Identities = 16/36 (44%), Positives = 21/36 (58%) Frame = +2 Query: 362 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDG 469 I G V TG V V + +LG+VV+A G P+DG Sbjct: 56 IHVGSEVVATGLPASVTVNDGMLGKVVNAFGTPLDG 91 >UniRef50_Q2S040 Cluster: Transcription termination factor rho; n=1; Salinibacter ruber DSM 13855|Rep: Transcription termination factor rho - Salinibacter ruber (strain DSM 13855) Length = 373 Score = 33.1 bits (72), Expect = 7.3 Identities = 13/32 (40%), Positives = 21/32 (65%) Frame = +1 Query: 565 IKAVDSLVPIGRGQRELIIGDRQTGKTALAID 660 ++ +D + P+G+GQR LI+ + GKT L D Sbjct: 113 MRVLDLVAPLGKGQRALIVSPPRAGKTVLLKD 144 >UniRef50_Q9F696 Cluster: Flagella-specific ATPase; n=16; Alphaproteobacteria|Rep: Flagella-specific ATPase - Bartonella bacilliformis Length = 315 Score = 33.1 bits (72), Expect = 7.3 Identities = 18/59 (30%), Positives = 29/59 (49%) Frame = +1 Query: 514 APIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 690 AP + R V ++TG+K +D P+ GQR I GK+ L + ++ F+K Sbjct: 7 APPALARARVGNGLRTGVKVIDIFTPLCFGQRIGIFSGSGVGKSTL-LSMMMQADHFDK 64 >UniRef50_Q1AVG2 Cluster: Transcription termination factor Rho; n=1; Rubrobacter xylanophilus DSM 9941|Rep: Transcription termination factor Rho - Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) Length = 498 Score = 33.1 bits (72), Expect = 7.3 Identities = 13/35 (37%), Positives = 21/35 (60%) Frame = +1 Query: 547 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651 +P + +D + PIG+GQR LI+ + GKT + Sbjct: 229 KPNDIAPRVIDLVAPIGKGQRGLIVSPPKAGKTTI 263 >UniRef50_A4M4Z8 Cluster: Putative uncharacterized protein; n=1; Geobacter bemidjiensis Bem|Rep: Putative uncharacterized protein - Geobacter bemidjiensis Bem Length = 519 Score = 33.1 bits (72), Expect = 7.3 Identities = 21/75 (28%), Positives = 36/75 (48%) Frame = -3 Query: 493 GFRVDWSLAINRVSQSVYYTPKDLLSDGNVYDSTSTLDNISFFDKLVITKYYHTHIVRFQ 314 G VD + AI+RV+ V + + N+ D D ++F D + + +V + Sbjct: 388 GVGVDRAEAIDRVTDRVDHAADQGRAYRNLDDLAGQFDRVAFLDLGELAEDRRADVVFLE 447 Query: 313 VKGHSLEA*GELHHL 269 V+ H+ +A GEL L Sbjct: 448 VQNHAGDAAGELEEL 462 >UniRef50_A2WHW2 Cluster: Flagellar biosynthesis/type III secretory pathway ATPase; n=3; Proteobacteria|Rep: Flagellar biosynthesis/type III secretory pathway ATPase - Burkholderia dolosa AUO158 Length = 476 Score = 33.1 bits (72), Expect = 7.3 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%) Frame = +2 Query: 263 AEEMVEFSSG--LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGR 436 A +E +SG + + D ++ F + G V GA + +G GR Sbjct: 83 ANARIETASGEWIDARVVGFRDDVTQLMPFRAPAGLFAGARVMPAGAGRQLTIGAAWRGR 142 Query: 437 VVDALGNPIDGKGPI 481 +VD +G P DG GP+ Sbjct: 143 IVDGMGEPFDGGGPL 157 >UniRef50_A7PWU3 Cluster: Chromosome chr19 scaffold_35, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_35, whole genome shotgun sequence - Vitis vinifera (Grape) Length = 126 Score = 33.1 bits (72), Expect = 7.3 Identities = 16/33 (48%), Positives = 18/33 (54%) Frame = -1 Query: 486 VSIGPLPSIGFPKASTTRPRICSPTGTSTIAPV 388 VS GP S G P RPR+ PTGT AP+ Sbjct: 46 VSTGPKLSTGSPSTLKIRPRVAPPTGTLRGAPL 78 >UniRef50_Q5CS50 Cluster: Putative uncharacterized protein; n=2; Cryptosporidium|Rep: Putative uncharacterized protein - Cryptosporidium parvum Iowa II Length = 856 Score = 33.1 bits (72), Expect = 7.3 Identities = 14/30 (46%), Positives = 21/30 (70%) Frame = +2 Query: 416 GEQILGRVVDALGNPIDGKGPIDTKSRMRV 505 GE ++ + D LGN IDG+ P TKS++R+ Sbjct: 135 GESVVRGINDNLGNNIDGRTPQTTKSQVRI 164 >UniRef50_Q98QX4 Cluster: ATP SYNTHASE BETA CHAIN; n=1; Mycoplasma pulmonis|Rep: ATP SYNTHASE BETA CHAIN - Mycoplasma pulmonis Length = 698 Score = 32.7 bits (71), Expect = 9.7 Identities = 15/40 (37%), Positives = 25/40 (62%) Frame = +1 Query: 553 MQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIIN 672 ++TGIK +D L+PI G + ++G GKT + + +IN Sbjct: 341 LETGIKVIDVLLPIPSGGKTGLLGGAGVGKT-VVVQELIN 379 >UniRef50_Q7URK7 Cluster: Excinuclease ABC subunit A; n=1; Pirellula sp.|Rep: Excinuclease ABC subunit A - Rhodopirellula baltica Length = 1031 Score = 32.7 bits (71), Expect = 9.7 Identities = 20/52 (38%), Positives = 30/52 (57%) Frame = +1 Query: 511 KAPIIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTI 666 K P+ +SVR ++ VD V I RG+ +I G +GKT+LA+DT+ Sbjct: 40 KTPVTRQPISVRGCRVHNLRDVD--VDIPRGELVVICGLSGSGKTSLALDTL 89 >UniRef50_Q3IUV2 Cluster: TraG; n=1; Rhodobacter sphaeroides 2.4.1|Rep: TraG - Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM158) Length = 1136 Score = 32.7 bits (71), Expect = 9.7 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 1/75 (1%) Frame = +2 Query: 263 AEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVK-RTGAIVDVPVGEQILGRV 439 +E SG + +NL +V G ++ D +TGA + G+QI+GRV Sbjct: 739 SEAESRLKSGGTSLDMNLNQMIGNELVRGGHNPLEVSDFFNPKTGAAMGE--GKQIVGRV 796 Query: 440 VDALGNPIDGKGPID 484 VD L N + G GP D Sbjct: 797 VDDLVNGLVGPGPQD 811 >UniRef50_Q2S0E2 Cluster: Transcription termination factor Rho; n=1; Salinibacter ruber DSM 13855|Rep: Transcription termination factor Rho - Salinibacter ruber (strain DSM 13855) Length = 472 Score = 32.7 bits (71), Expect = 9.7 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = +1 Query: 562 GIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651 G + +D PIG+GQR LI+ + GKT L Sbjct: 213 GPRILDLFAPIGKGQRGLIVSPPKAGKTVL 242 >UniRef50_Q2RXS1 Cluster: Putative uncharacterized protein precursor; n=1; Rhodospirillum rubrum ATCC 11170|Rep: Putative uncharacterized protein precursor - Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) Length = 293 Score = 32.7 bits (71), Expect = 9.7 Identities = 19/59 (32%), Positives = 28/59 (47%) Frame = +1 Query: 520 IIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGE 696 I+ RVSV P QTG A D+L + E+II D + +T++ KG+ Sbjct: 235 ILSARVSVDPPTQTGSDAEDALAATRERRVEMIIEDAAVANGPSSDETVVGATLMAKGD 293 >UniRef50_A6VUA3 Cluster: Positive regulator of sigma E, RseC/MucC; n=2; Marinomonas|Rep: Positive regulator of sigma E, RseC/MucC - Marinomonas sp. MWYL1 Length = 155 Score = 32.7 bits (71), Expect = 9.7 Identities = 15/23 (65%), Positives = 18/23 (78%) Frame = +3 Query: 192 LEETGRVLSIGDGIARVYGLKTS 260 +EETGRVLSI DG A V ++TS Sbjct: 2 IEETGRVLSIEDGFANVETIRTS 24 >UniRef50_A6Q2N1 Cluster: Flagellar-specific ATP synthase FliI; n=1; Nitratiruptor sp. SB155-2|Rep: Flagellar-specific ATP synthase FliI - Nitratiruptor sp. (strain SB155-2) Length = 431 Score = 32.7 bits (71), Expect = 9.7 Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 4/62 (6%) Frame = +1 Query: 478 NRHEIPYEGR--FKAPIIIP--RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKT 645 N+ ++ +E + K I P R ++ P+ G+++++ L IG+GQR I GK+ Sbjct: 97 NKEKLQFETKVSLKNETINPLLRERIKTPLDIGVRSINGLFTIGKGQRIGIFASAGVGKS 156 Query: 646 AL 651 L Sbjct: 157 TL 158 >UniRef50_A5GCR1 Cluster: H+-transporting two-sector ATPase, alpha/beta subunit, central region; n=1; Geobacter uraniumreducens Rf4|Rep: H+-transporting two-sector ATPase, alpha/beta subunit, central region - Geobacter uraniumreducens Rf4 Length = 524 Score = 32.7 bits (71), Expect = 9.7 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +1 Query: 550 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 651 P+ TG +AVD L P+ RG + G TGKT L Sbjct: 187 PLVTGQRAVDFLFPLARGGAAVFPGGFGTGKTVL 220 >UniRef50_A2BND1 Cluster: DNA gyrase/topoisomerase IV, subunit A; n=5; Prochlorococcus marinus|Rep: DNA gyrase/topoisomerase IV, subunit A - Prochlorococcus marinus (strain AS9601) Length = 813 Score = 32.7 bits (71), Expect = 9.7 Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 6/72 (8%) Frame = +2 Query: 284 SSGLK-GMALNLEPDNVGVVVFGNDKLIKEGDIV-KRTGAIV---DVPV-GEQILGRVVD 445 S+G+ GMA N+ P N+G +V G L+K DI K+ I+ D P GE I R ++ Sbjct: 170 STGIAVGMATNIPPHNLGEIVDGLVTLVKNKDISDKKLFNIIKGPDFPTGGELIYSRAIE 229 Query: 446 ALGNPIDGKGPI 481 L GKG I Sbjct: 230 ELYQ--TGKGSI 239 >UniRef50_A2F8P6 Cluster: ABC transporter family protein; n=1; Trichomonas vaginalis G3|Rep: ABC transporter family protein - Trichomonas vaginalis G3 Length = 536 Score = 32.7 bits (71), Expect = 9.7 Identities = 17/30 (56%), Positives = 21/30 (70%), Gaps = 1/30 (3%) Frame = +1 Query: 565 IKAVDSL-VPIGRGQRELIIGDRQTGKTAL 651 IKA+DSL +GRG+ LIIG +GKT L Sbjct: 232 IKAIDSLDFTVGRGETILIIGPNGSGKTTL 261 >UniRef50_Q4PCL5 Cluster: Putative uncharacterized protein; n=1; Ustilago maydis|Rep: Putative uncharacterized protein - Ustilago maydis (Smut fungus) Length = 867 Score = 32.7 bits (71), Expect = 9.7 Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 1/74 (1%) Frame = +1 Query: 487 EIPYEGRFKAPII-IPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDT 663 E P RF ++ + VSVR TG D + IG G+R I+G GKT L + Sbjct: 604 EDPEASRFPGSLVHLEGVSVRYDGNTGYTINDIGLTIGPGERVGIVGPNGHGKTTL-LHC 662 Query: 664 IINQQRFNKGEDEK 705 I+ + KG E+ Sbjct: 663 IVGKLTPTKGTVER 676 >UniRef50_O94034 Cluster: Nucleotide phosphodiesterase; n=4; Saccharomycetales|Rep: Nucleotide phosphodiesterase - Candida albicans (Yeast) Length = 571 Score = 32.7 bits (71), Expect = 9.7 Identities = 14/45 (31%), Positives = 29/45 (64%) Frame = -3 Query: 397 STSTLDNISFFDKLVITKYYHTHIVRFQVKGHSLEA*GELHHLLS 263 +TS LDN+ F DK ++ +++ TH+ ++G + + G+L+ +S Sbjct: 75 NTSKLDNLPFSDKSLLIQFFFTHLNILMIQGENSDE-GKLYQEIS 118 >UniRef50_O83541 Cluster: V-type ATP synthase alpha chain 2; n=7; Bacteria|Rep: V-type ATP synthase alpha chain 2 - Treponema pallidum Length = 605 Score = 32.7 bits (71), Expect = 9.7 Identities = 15/38 (39%), Positives = 23/38 (60%) Frame = +1 Query: 532 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKT 645 +++V EP+ TG +A+D P+ +G I G TGKT Sbjct: 212 KLAVCEPLVTGQRAIDVFFPLSKGGTAAIPGGFGTGKT 249 >UniRef50_Q92HL2 Cluster: Transcription termination factor rho; n=164; cellular organisms|Rep: Transcription termination factor rho - Rickettsia conorii Length = 458 Score = 32.7 bits (71), Expect = 9.7 Identities = 12/28 (42%), Positives = 20/28 (71%) Frame = +1 Query: 568 KAVDSLVPIGRGQRELIIGDRQTGKTAL 651 + ++ + P+G+GQR LI+ +TGKT L Sbjct: 192 RVIELVAPMGKGQRALIVAPPRTGKTVL 219 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 779,183,803 Number of Sequences: 1657284 Number of extensions: 16998600 Number of successful extensions: 58936 Number of sequences better than 10.0: 162 Number of HSP's better than 10.0 without gapping: 54743 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 58792 length of database: 575,637,011 effective HSP length: 99 effective length of database: 411,565,895 effective search space used: 60088620670 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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