Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00252
         (738 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    27   0.16 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.84 
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   5.9  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 13/43 (30%), Positives = 17/43 (39%)
 Frame = +1

Query: 55  LPRCQRWRYPQWPWHLANYMSQPPTKLPRSPPSSKRGSLEPRP 183
           +P C  W   +        +  PPT  PR    S+R    PRP
Sbjct: 228 VPECADWYKGRLTDEQLKELENPPTPKPRPTKVSRRKPRPPRP 270


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 10/42 (23%), Positives = 20/42 (47%)
 Frame = -1

Query: 225  HQCSRHDQSLLDQPWARLQGSSLRGWWRSRQLCGWLRHVVCE 100
            H C+ + + +L +   +     L  W + R++C W +   CE
Sbjct: 1113 HNCNAYYRCVLGELRKQYCAGGLH-WNKERKICDWPKSAKCE 1153


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/42 (26%), Positives = 17/42 (40%)
 Frame = -1

Query: 321 GSKLRAIPLRPEENSTISSAWMSSSHKHERYHHQCSRHDQSL 196
           G   R I     E  T   +W++ +  + R  H C   D+ L
Sbjct: 244 GQITRRIAAVASEKVTSEKSWIALNDDYNRLCHLCFLLDEKL 285


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,845
Number of Sequences: 336
Number of extensions: 3887
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)