Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00251
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.4  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   4.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.8  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -2

Query: 262  IPIFNKILLLM*RTGYCIYFHALLVCSLLH 173
            I +  K +++M  +G  I+   + +CSL+H
Sbjct: 1150 IKLVIKAIIIMILSGCIIFTEGIWICSLIH 1179


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 602 LSTLDLASSPWLMPV 558
           +ST+DL SS W +P+
Sbjct: 391 MSTIDLRSSYWQIPL 405


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -2

Query: 256 IFNKILLLM*RTGYCIYFHALLVCSLLHFCYYI 158
           +F   LLL+    Y  Y H L  C+ + F  ++
Sbjct: 247 LFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHL 279


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,450
Number of Sequences: 336
Number of extensions: 3835
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)