Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00251
(728 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 79 5e-16
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 79 6e-16
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 76 6e-15
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 63 5e-11
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 63 5e-11
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 52 6e-08
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 50 3e-07
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 36 0.004
SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Sch... 27 2.7
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 27 3.6
SPBC36.05c |clr6||histone deacetylase |Schizosaccharomyces pombe... 27 3.6
SPBC14F5.05c |sam1||S-adenosylmethionine synthetase |Schizosacch... 25 8.4
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 25 8.4
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 25 8.4
SPCC1795.08c |||histone acetyltransferase complex subunit |Schiz... 25 8.4
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 79.4 bits (187), Expect = 5e-16
Identities = 37/49 (75%), Positives = 40/49 (81%)
Frame = -3
Query: 648 GKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSCWM 502
GKSIYG KF DENF LKH PG+LSMANAG +TNGSQFFITTV T W+
Sbjct: 73 GKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTP-WL 120
Score = 62.5 bits (145), Expect = 6e-11
Identities = 27/43 (62%), Positives = 33/43 (76%)
Frame = -2
Query: 508 LDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQI 380
LDG+HVVFG V EGM+VVK++E+ GS SG T RIVI CG +
Sbjct: 120 LDGKHVVFGEVTEGMDVVKKVESLGSNSGATRARIVIDKCGTV 162
Score = 36.7 bits (81), Expect = 0.003
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -2
Query: 727 YKGSIFHRVIPNFMLQGG 674
Y GS FHRVIP FMLQGG
Sbjct: 46 YAGSTFHRVIPQFMLQGG 63
Score = 26.2 bits (55), Expect = 4.8
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -1
Query: 722 GLHFPSCHPQFHAARRDFTNHNGTGG 645
G F PQF DFT NGTGG
Sbjct: 48 GSTFHRVIPQFMLQGGDFTRGNGTGG 73
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 79.0 bits (186), Expect = 6e-16
Identities = 36/49 (73%), Positives = 41/49 (83%)
Frame = -3
Query: 648 GKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSCWM 502
GKSIYG++F DENF L H PG+LSMANAG D+NGSQFFITTVKT W+
Sbjct: 98 GKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSNGSQFFITTVKTP-WL 145
Score = 41.1 bits (92), Expect = 2e-04
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = -2
Query: 727 YKGSIFHRVIPNFMLQGG 674
Y+GSIFHRVIPNFM+QGG
Sbjct: 71 YEGSIFHRVIPNFMIQGG 88
Score = 33.5 bits (73), Expect = 0.032
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -2
Query: 508 LDGRHVVFGNVVEGMEVVKQI 446
LDG HVVFG V+ G ++VK+I
Sbjct: 145 LDGHHVVFGEVLSGYDIVKKI 165
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 75.8 bits (178), Expect = 6e-15
Identities = 35/45 (77%), Positives = 38/45 (84%)
Frame = -3
Query: 648 GKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 514
G+SIYG KFEDENF LKH P +LSMANAG +TNGSQFFITTV T
Sbjct: 78 GESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPT 122
Score = 42.3 bits (95), Expect = 7e-05
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = -2
Query: 508 LDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCG 386
LDG+HVVFG V++G V+ IE +++ +VI++CG
Sbjct: 125 LDGKHVVFGKVIQGKSTVRTIENLETKNDDPVVPVVIEECG 165
Score = 37.5 bits (83), Expect = 0.002
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -2
Query: 727 YKGSIFHRVIPNFMLQGG 674
YKGS FHRVI NFMLQGG
Sbjct: 51 YKGSRFHRVIKNFMLQGG 68
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 62.9 bits (146), Expect = 5e-11
Identities = 31/50 (62%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = -3
Query: 648 GKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSCWM 502
G SIYG+KF+DE + L HTG G+LSMANAG +TN SQFFIT T W+
Sbjct: 64 GTSIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTP-WL 112
Score = 41.5 bits (93), Expect = 1e-04
Identities = 35/99 (35%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Frame = -2
Query: 727 YKGSIFHRVIPNFMLQGGTSPTITALGEIHLRQ*V*RREFHP*AHWTWRPL-----HG*C 563
Y G IFHRVIP+F++QGG PT T G + E H H T + G
Sbjct: 38 YDGVIFHRVIPDFVIQGG-DPTGTGRGGTSIYGDKFDDEIHSDLHHTGAGILSMANAGPN 96
Query: 562 RC*Y*WFPVLHHHCQDLLLDGRHVVFGNVVEGMEVVKQI 446
+F L LDG+H +FG VV G+ V K++
Sbjct: 97 TNSSQFFITL---APTPWLDGKHTIFGRVVSGLSVCKRM 132
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 62.9 bits (146), Expect = 5e-11
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = -3
Query: 624 FEDENFTLKHTGPGVLSMANAGADTNGSQFFITTV 520
F DENFTLKH PG+LSMANAG D+NG QFFITTV
Sbjct: 91 FPDENFTLKHDRPGLLSMANAGKDSNGCQFFITTV 125
Score = 44.8 bits (101), Expect = 1e-05
Identities = 19/44 (43%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Frame = -2
Query: 508 LDGRHVVFGNVVEGMEVVKQIE-TFGSQSGKTSKRIVIKDCGQI 380
LDG+HVVFG V+EG ++VK+IE T + + + I +CG++
Sbjct: 130 LDGKHVVFGEVIEGYDIVKEIESTPVGANSRPKSNVAIVECGEM 173
Score = 32.3 bits (70), Expect = 0.073
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -2
Query: 727 YKGSIFHRVIPNFMLQGG 674
YK S FHR+I FM+QGG
Sbjct: 55 YKNSTFHRIIQGFMIQGG 72
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 52.4 bits (120), Expect = 6e-08
Identities = 28/50 (56%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Frame = -3
Query: 648 GKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSCWM 502
G+SI+ FEDE + LKH P +SMAN+G +TNGSQFFITT T W+
Sbjct: 517 GESIWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTP-WL 565
Score = 33.1 bits (72), Expect = 0.042
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -2
Query: 727 YKGSIFHRVIPNFMLQGG 674
Y +IFHR+I NFM+QGG
Sbjct: 491 YDNTIFHRIIKNFMIQGG 508
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 50.0 bits (114), Expect = 3e-07
Identities = 24/41 (58%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Frame = -3
Query: 648 GKSIYGNKFEDENFT-LKHTGPGVLSMANAGADTNGSQFFI 529
G+SI+G F+DE LKH G++SMAN G +TNGSQFFI
Sbjct: 338 GQSIWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFI 378
Score = 30.7 bits (66), Expect = 0.22
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 4/110 (3%)
Frame = -2
Query: 727 YKGSIFHRVIPNFMLQGGTSPTITALGEIHLRQ*V*RREF-HP*AHWTWRPLHG*CR--- 560
Y+ +IFHR I FM+QGG P+ T G + + EF +P H + R
Sbjct: 312 YRNTIFHRNIARFMIQGG-DPSGTGRGGQSIWGKPFKDEFCNPLKHDDRGIISMANRGKN 370
Query: 559 C*Y*WFPVLHHHCQDLLLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSK 410
F +L+ + LD +H +FG VV G+ V+ +E + S K
Sbjct: 371 TNGSQFFILYGPAKH--LDNKHTIFGRVVGGLNVLDALEKVPTNSNDHPK 418
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 36.3 bits (80), Expect = 0.004
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = -2
Query: 727 YKGSIFHRVIPNFMLQGGTSPTITALG 647
Y G+I HRV+P F++QGG PT T +G
Sbjct: 49 YDGTIVHRVVPEFLIQGG-DPTGTGMG 74
Score = 33.9 bits (74), Expect = 0.024
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -3
Query: 648 GKSIYGNKFEDENFT-LKHTGPGVLSMANAGADTNGSQFFITTVKTSCWMADMLSLGMLL 472
G+SIYG F E L+ G++ MA + N SQFFIT T W G ++
Sbjct: 75 GESIYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVV 134
>SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 27.1 bits (57), Expect = 2.7
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 420 FPDWLPKVSICLTTSMPSTTFPKTTCLPS 506
FP WL K S CL +P T+ P T + S
Sbjct: 302 FP-WLKKNSFCLYLPIPLTSIPSTPSIRS 329
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 26.6 bits (56), Expect = 3.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2
Query: 547 WFPVLHHHC 521
WFP +HHHC
Sbjct: 97 WFPEVHHHC 105
>SPBC36.05c |clr6||histone deacetylase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 405
Score = 26.6 bits (56), Expect = 3.6
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +2
Query: 473 NNIPKDNMSAIQQEVLTVVMKNWEPLVSAPALAMERTPG 589
NN+ N + + +++N L AP++ M +TPG
Sbjct: 345 NNMENHNTRQYLDSITSEIIENLRNLSFAPSVQMHKTPG 383
>SPBC14F5.05c |sam1||S-adenosylmethionine synthetase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 382
Score = 25.4 bits (53), Expect = 8.4
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +3
Query: 615 RLQTYCRRWISPSAVMVGEVPPCSMKLGMTRWKMEPL 725
R Y RWI+ S V G C ++L EPL
Sbjct: 279 RSAAYAARWIAKSLVAAGLARRCLVQLSYAIGVAEPL 315
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 25.4 bits (53), Expect = 8.4
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = -3
Query: 651 WGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSCWMADMLSLGM 478
W + I+G + F HT L +AN GS F T KT + ++ + GM
Sbjct: 400 WREEIFGPVLAVKTF---HTNEEALELANDSEYGLGSGVFSTNPKTLEFFSNNIEAGM 454
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 25.4 bits (53), Expect = 8.4
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 479 IPKDNMSAIQQEVLTVVMKNWEPLVSAPAL-AMERTPGPV 595
+P+D S + +L + + W PL +A L A+ P P+
Sbjct: 316 LPRDIKSKDPRNLLLAIFQQWLPLSTAILLTAIREIPSPI 355
>SPCC1795.08c |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 985
Score = 25.4 bits (53), Expect = 8.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 624 TYCRRWISPSAVMVGEVPPCSMKLGMTRWKME 719
T +R I+PSA ++PP L ++R K E
Sbjct: 848 TMTKRAIAPSAASTEKLPPVPSPLELSRLKSE 879
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,943,272
Number of Sequences: 5004
Number of extensions: 60770
Number of successful extensions: 182
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 181
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 343230174
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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