Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00251
         (728 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    24   4.2  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    23   9.7  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    23   9.7  

>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -2

Query: 547 WFPVLHHHCQD 515
           W+P + HHC D
Sbjct: 100 WYPEIKHHCPD 110


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 98  TFIYINYYASIWYINK*YLL 39
           TFI + YYAS+  +   YL+
Sbjct: 164 TFIVMTYYASLMAVTMRYLI 183


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 98  TFIYINYYASIWYINK*YLL 39
           TFI + YYAS+  +   YL+
Sbjct: 164 TFIVMTYYASLMAVTMRYLI 183


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 740,184
Number of Sequences: 2352
Number of extensions: 15754
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)