Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00251
         (728 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    25   0.97 
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    25   0.97 
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   3.9  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           23   3.9  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           23   3.9  
U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              22   6.8  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   9.0  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   9.0  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   9.0  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 24.6 bits (51), Expect = 0.97
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 473 NNIPKDNMSAIQQEVLTVVMKNWE 544
           NNI K NMS I++E +T    +WE
Sbjct: 413 NNIFK-NMSQIEREAITFQYTDWE 435


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 24.6 bits (51), Expect = 0.97
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 473 NNIPKDNMSAIQQEVLTVVMKNWE 544
           NNI K NMS I++E +T    +WE
Sbjct: 413 NNIFK-NMSQIEREAITFQYTDWE 435


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -2

Query: 511 LLDGRHVVFGNVVEGMEVVKQIETFGSQSGKT 416
           LL G   VFG  V+GM V   ++  G   G+T
Sbjct: 877 LLQGVQQVFGQGVQGMNVPYGMQR-GQSGGQT 907



 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -3

Query: 546 GSQFFITTVKTSCWMADMLSLGMLLKAW 463
           G++ + T +KT+ W    ++ G  LKA+
Sbjct: 113 GAKDYQTFLKTAAWARVHVNEGQFLKAF 140


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 169 KNATMNILIMHGNKCNNQFATSIAI 243
           KN  + IL  HG +CN+   TSI +
Sbjct: 89  KNPKLGILGTHGRQCND---TSIGV 110


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 169 KNATMNILIMHGNKCNNQFATSIAI 243
           KN  + IL  HG +CN+   TSI +
Sbjct: 90  KNPKLGILGTHGRQCND---TSIGV 111


>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 549 NGSQFFITTVKTSCWMADMLSLGMLLK 469
           N +  F TTV    W+ D  ++G + K
Sbjct: 105 NDTVSFTTTVSARFWLMDCRNIGAVPK 131


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +3

Query: 618 LQTYCRRWISPSAVMVGEVPPCSMKL 695
           +  Y R W+  S ++    P CS KL
Sbjct: 134 IDEYERLWVLDSGLVNNTQPMCSPKL 159


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +3

Query: 411 LEVFPDWLPKVSICLTTSMPSTTFPKTTC 497
           L V+P++   V +C   S   ++  KT C
Sbjct: 643 LNVYPEFQENVQLCSEISESYSSNNKTLC 671


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +3

Query: 618 LQTYCRRWISPSAVMVGEVPPCSMKL 695
           +  + R WI  S ++    P CS KL
Sbjct: 133 IDKFDRLWILDSGIINNTQPMCSPKL 158


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,397
Number of Sequences: 438
Number of extensions: 4281
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)