Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00251
(728 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 88 5e-18
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 87 1e-17
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 87 1e-17
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 86 2e-17
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 85 3e-17
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 85 5e-17
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 84 8e-17
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 84 1e-16
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 81 6e-16
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 77 2e-14
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 76 2e-14
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 74 1e-13
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 70 2e-12
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 68 7e-12
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 67 1e-11
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 67 1e-11
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 62 5e-10
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 57 1e-08
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 54 1e-07
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 46 3e-05
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 42 3e-04
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 41 0.001
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 34 0.084
At5g04200.1 68418.m00408 latex-abundant protein, putative (AMC9)... 32 0.45
At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyc... 31 1.0
At3g02600.1 68416.m00251 phosphatidic acid phosphatase family pr... 29 2.4
At4g09150.1 68417.m01515 T-complex protein 11 contains Pfam PF05... 29 3.2
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 29 4.2
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 29 4.2
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 29 4.2
At1g03590.1 68414.m00339 protein phosphatase 2C family protein /... 29 4.2
At5g59930.1 68418.m07515 DC1 domain-containing protein / UV-B li... 28 5.5
At3g29080.1 68416.m03641 hypothetical protein 27 9.6
At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C... 27 9.6
At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C... 27 9.6
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 88.2 bits (209), Expect = 5e-18
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = -3
Query: 648 GKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSCWM 502
G SIYG KFEDENFTLKHTGPG+LSMANAG +TNGSQFFI TVKTS W+
Sbjct: 166 GISIYGAKFEDENFTLKHTGPGILSMANAGPNTNGSQFFICTVKTS-WL 213
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/44 (38%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Frame = -2
Query: 508 LDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKR-IVIKDCGQI 380
LD +HVVFG V+EGM++V+ +E+ +++ K+ I CG++
Sbjct: 213 LDNKHVVFGQVIEGMKLVRTLESQETRAFDVPKKGCRIYACGEL 256
Score = 34.7 bits (76), Expect = 0.064
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = -2
Query: 727 YKGSIFHRVIPNFMLQGG 674
YKGS FHR+I +FM+QGG
Sbjct: 139 YKGSSFHRIIKDFMIQGG 156
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/49 (81%), Positives = 43/49 (87%)
Frame = -3
Query: 648 GKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSCWM 502
G+SIYG KF DENF LKHTGPGVLSMAN+G DTNGSQFFITTV TS W+
Sbjct: 110 GESIYGQKFADENFKLKHTGPGVLSMANSGEDTNGSQFFITTVTTS-WL 157
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/43 (58%), Positives = 32/43 (74%)
Frame = -2
Query: 508 LDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQI 380
LDGRHVVFG VV+GM+VV +IE G QSG ++VI D G++
Sbjct: 157 LDGRHVVFGKVVQGMDVVYKIEAEGKQSGTPKSKVVIADSGEL 199
Score = 37.5 bits (83), Expect = 0.009
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = -2
Query: 727 YKGSIFHRVIPNFMLQGG 674
YKGS FHR+IP+FM+QGG
Sbjct: 83 YKGSKFHRIIPSFMIQGG 100
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 86.6 bits (205), Expect = 1e-17
Identities = 39/49 (79%), Positives = 44/49 (89%)
Frame = -3
Query: 648 GKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSCWM 502
G+SIYG+KFEDENF KHTGPG+LSMANAGA+TNGSQFFI TVKT W+
Sbjct: 82 GESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTD-WL 129
Score = 66.1 bits (154), Expect = 2e-11
Identities = 28/44 (63%), Positives = 36/44 (81%)
Frame = -2
Query: 508 LDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQIA 377
LDG+HVVFG VVEG++VVK IE GS SGK +K +V+ DCGQ++
Sbjct: 129 LDGKHVVFGQVVEGLDVVKAIEKVGSSSGKPTKPVVVADCGQLS 172
Score = 37.1 bits (82), Expect = 0.012
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2
Query: 727 YKGSIFHRVIPNFMLQGG 674
+KGS FHRVIPNFM QGG
Sbjct: 55 FKGSKFHRVIPNFMCQGG 72
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 86.2 bits (204), Expect = 2e-17
Identities = 40/49 (81%), Positives = 42/49 (85%)
Frame = -3
Query: 648 GKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSCWM 502
G+SIYG KF DENF LKHTGPG LSMANAG DTNGSQFFITTV TS W+
Sbjct: 113 GESIYGEKFADENFKLKHTGPGFLSMANAGQDTNGSQFFITTVTTS-WL 160
Score = 55.2 bits (127), Expect = 4e-08
Identities = 24/43 (55%), Positives = 32/43 (74%)
Frame = -2
Query: 508 LDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQI 380
LDGRHVVFG VV GM+VV ++E G+QSG ++VI D G++
Sbjct: 160 LDGRHVVFGKVVTGMDVVYKVEAEGNQSGTPKSKVVIVDSGEL 202
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = -2
Query: 727 YKGSIFHRVIPNFMLQGG 674
YKGS FHR+IP+FMLQGG
Sbjct: 86 YKGSSFHRIIPSFMLQGG 103
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 85.4 bits (202), Expect = 3e-17
Identities = 39/49 (79%), Positives = 43/49 (87%)
Frame = -3
Query: 648 GKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSCWM 502
G+SIYG KFEDENF KHTGPG+LSMANAGA+TNGSQFFI TVKT W+
Sbjct: 83 GESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTD-WL 130
Score = 66.5 bits (155), Expect = 2e-11
Identities = 29/44 (65%), Positives = 36/44 (81%)
Frame = -2
Query: 508 LDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQIA 377
LDG+HVVFG VVEG++VVK IE GS SGK +K +VI DCG+I+
Sbjct: 130 LDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTKPVVIADCGEIS 173
Score = 37.5 bits (83), Expect = 0.009
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2
Query: 727 YKGSIFHRVIPNFMLQGG 674
+KGS FHRVIPNFM QGG
Sbjct: 56 FKGSSFHRVIPNFMCQGG 73
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 85.0 bits (201), Expect = 5e-17
Identities = 38/49 (77%), Positives = 44/49 (89%)
Frame = -3
Query: 648 GKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSCWM 502
G+SIYG+KFEDENF LKHTGPG+LSMAN+G +TNGSQFFI T KTS W+
Sbjct: 82 GESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFFICTEKTS-WL 129
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/43 (58%), Positives = 33/43 (76%)
Frame = -2
Query: 508 LDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQI 380
LDG+HVVFG VV+G VVK +E GS G S+R+VI+DCG++
Sbjct: 129 LDGKHVVFGKVVDGYNVVKAMEDVGSDMGNPSERVVIEDCGEL 171
Score = 36.7 bits (81), Expect = 0.016
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -2
Query: 727 YKGSIFHRVIPNFMLQGG 674
YKGS FHR+IP FM QGG
Sbjct: 55 YKGSAFHRIIPGFMCQGG 72
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 84.2 bits (199), Expect = 8e-17
Identities = 38/49 (77%), Positives = 44/49 (89%)
Frame = -3
Query: 648 GKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSCWM 502
G+SIYG+KF+DENF KHTGPG+LSMANAGA+TNGSQFFI T KTS W+
Sbjct: 83 GESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICTEKTS-WL 130
Score = 68.1 bits (159), Expect = 6e-12
Identities = 30/44 (68%), Positives = 36/44 (81%)
Frame = -2
Query: 508 LDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQIA 377
LDG+HVVFG VVEG+ VV+ IE GS SG+TSK +VI DCGQI+
Sbjct: 130 LDGKHVVFGQVVEGLNVVRDIEKVGSDSGRTSKPVVIADCGQIS 173
Score = 36.7 bits (81), Expect = 0.016
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -2
Query: 727 YKGSIFHRVIPNFMLQGG 674
YKGS FHRVIP FM QGG
Sbjct: 56 YKGSSFHRVIPKFMCQGG 73
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 83.8 bits (198), Expect = 1e-16
Identities = 38/49 (77%), Positives = 43/49 (87%)
Frame = -3
Query: 648 GKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSCWM 502
G+SIYG+KF DENF LKHTGPG LSMAN+G D+NGSQFFITTV TS W+
Sbjct: 137 GESIYGDKFADENFKLKHTGPGFLSMANSGPDSNGSQFFITTVTTS-WL 184
Score = 48.4 bits (110), Expect = 5e-06
Identities = 21/44 (47%), Positives = 29/44 (65%)
Frame = -2
Query: 508 LDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQIA 377
LDG HVVFG V+ GMEVV++IE G SG ++I G+++
Sbjct: 184 LDGHHVVFGKVLSGMEVVRKIEAQGQDSGVPKANVIIFASGEVS 227
Score = 35.9 bits (79), Expect = 0.028
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = -2
Query: 727 YKGSIFHRVIPNFMLQGG 674
+KGS FHR+IP FM+QGG
Sbjct: 110 FKGSSFHRIIPGFMIQGG 127
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 81.4 bits (192), Expect = 6e-16
Identities = 36/49 (73%), Positives = 41/49 (83%)
Frame = -3
Query: 648 GKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSCWM 502
GKS+YG F+DENF L H GPGVLSMANAG +TNGSQFFI T+KTS W+
Sbjct: 164 GKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTS-WL 211
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/44 (61%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Frame = -2
Query: 508 LDGRHVVFGNVVEGMEVVKQIETFGSQSG-KTSKRIVIKDCGQI 380
LDGRHVVFG V+EGMEVVK IE + G + K++VI DCGQ+
Sbjct: 211 LDGRHVVFGQVIEGMEVVKLIEEQETDRGDRPRKKVVIADCGQL 254
Score = 35.1 bits (77), Expect = 0.048
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2
Query: 727 YKGSIFHRVIPNFMLQGG 674
YKGS FHRVI +FM+QGG
Sbjct: 137 YKGSTFHRVIRDFMIQGG 154
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 76.6 bits (180), Expect = 2e-14
Identities = 34/47 (72%), Positives = 39/47 (82%)
Frame = -3
Query: 642 SIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSCWM 502
SIYG+KFEDENFT KHTGPG+LSMAN+G +TNG QFFIT K W+
Sbjct: 110 SIYGHKFEDENFTAKHTGPGLLSMANSGPNTNGCQFFITCAKCD-WL 155
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = -2
Query: 508 LDGRHVVFGNVV-EGMEVVKQIETFG-SQSGKTSKRIVIKDCGQI 380
LD +HVVFG V+ +G+ V+++IE + + +VI +CG++
Sbjct: 155 LDNKHVVFGRVLGDGLLVMRKIENVAIGPNNRPKLAVVITECGEM 199
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 76.2 bits (179), Expect = 2e-14
Identities = 35/49 (71%), Positives = 41/49 (83%)
Frame = -3
Query: 648 GKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSCWM 502
G+SIYG KF+DENF KHTG G+LSMAN+G +TNGSQFFI T KTS W+
Sbjct: 82 GESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFFICTDKTS-WL 129
Score = 66.5 bits (155), Expect = 2e-11
Identities = 29/44 (65%), Positives = 36/44 (81%)
Frame = -2
Query: 508 LDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQIA 377
LDG+HVVFG VV+G++VVK IE GS SGKTSK + I DCGQ++
Sbjct: 129 LDGKHVVFGQVVKGLDVVKAIEKVGSDSGKTSKVVTITDCGQLS 172
Score = 37.5 bits (83), Expect = 0.009
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2
Query: 727 YKGSIFHRVIPNFMLQGG 674
+KGSIFHRVIP FM QGG
Sbjct: 55 FKGSIFHRVIPGFMCQGG 72
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/46 (71%), Positives = 39/46 (84%)
Frame = -3
Query: 648 GKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTS 511
G+SIYG KF+DENF LKH G+LSMAN+G +TNGSQFFITT +TS
Sbjct: 83 GESIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQFFITTTRTS 128
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/44 (50%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = -2
Query: 508 LDGRHVVFGNVVEGMEVVKQIETFG-SQSGKTSKRIVIKDCGQI 380
LDG+HVVFG V +GM VV+ IE + S+ +VI DCG+I
Sbjct: 130 LDGKHVVFGRVTKGMGVVRSIEHVSIEEQSCPSQDVVIHDCGEI 173
Score = 33.1 bits (72), Expect = 0.19
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2
Query: 727 YKGSIFHRVIPNFMLQGG 674
YKG+ FHRVI FM+QGG
Sbjct: 56 YKGNRFHRVIKGFMIQGG 73
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/42 (78%), Positives = 37/42 (88%), Gaps = 1/42 (2%)
Frame = -3
Query: 648 GKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFIT 526
G+SIYG+KFEDE N LKHTG G+LSMANAG +TNGSQFFIT
Sbjct: 72 GESIYGSKFEDEINKELKHTGAGILSMANAGPNTNGSQFFIT 113
Score = 34.3 bits (75), Expect = 0.084
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = -2
Query: 508 LDGRHVVFGNVVEGMEVVKQI 446
LDG+H +FG V GMEV+K++
Sbjct: 120 LDGKHTIFGRVCRGMEVIKRL 140
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -2
Query: 727 YKGSIFHRVIPNFMLQGGTSPTITALG 647
Y +FHR++ +F++QGG PT T G
Sbjct: 46 YDNVLFHRIVKDFIVQGG-DPTGTGRG 71
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 67.7 bits (158), Expect = 7e-12
Identities = 30/58 (51%), Positives = 42/58 (72%)
Frame = -3
Query: 642 SIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSCWMADMLSLGMLLK 469
SIYG F DENF ++H+ G+++MAN G D+NGSQFFITTVK S + + LG +++
Sbjct: 127 SIYGGTFPDENFKIQHSHAGMVAMANTGPDSNGSQFFITTVKASWLEGEHVVLGKVIQ 184
Score = 44.4 bits (100), Expect = 8e-05
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Frame = -2
Query: 508 LDGRHVVFGNVVEGMEVVKQIE-TFGSQSGKTSKRIVIKDCGQI 380
L+G HVV G V++GM+ V IE G+ SGK K++VI D G+I
Sbjct: 172 LEGEHVVLGKVIQGMDNVFAIEGGAGTYSGKPRKKVVIADSGEI 215
Score = 31.1 bits (67), Expect = 0.78
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -2
Query: 727 YKGSIFHRVIPNFMLQGG 674
YKG+ FHR+I F++QGG
Sbjct: 98 YKGTPFHRIISGFVIQGG 115
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 67.3 bits (157), Expect = 1e-11
Identities = 30/40 (75%), Positives = 32/40 (80%)
Frame = -3
Query: 648 GKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFI 529
G+SIYG KF DENF L H G GVLSMAN G +TNGSQFFI
Sbjct: 86 GESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQFFI 125
Score = 55.2 bits (127), Expect = 4e-08
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = -2
Query: 508 LDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQ 383
LDG+HVVFG VVEGM V+K++E G+ GK + + I DCG+
Sbjct: 133 LDGKHVVFGKVVEGMAVIKKMELVGTSDGKPTSPVKIIDCGE 174
Score = 31.9 bits (69), Expect = 0.45
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -2
Query: 727 YKGSIFHRVIPNFMLQGG 674
+KGS FHRVI FM QGG
Sbjct: 59 FKGSSFHRVIKGFMAQGG 76
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 67.3 bits (157), Expect = 1e-11
Identities = 30/40 (75%), Positives = 32/40 (80%)
Frame = -3
Query: 648 GKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFI 529
G+SIYG KF DENF L H G GVLSMAN G +TNGSQFFI
Sbjct: 86 GESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQFFI 125
Score = 55.2 bits (127), Expect = 4e-08
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = -2
Query: 508 LDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQ 383
LDG+HVVFG VVEGM V+K++E G+ GK + + I DCG+
Sbjct: 133 LDGKHVVFGKVVEGMAVIKKMELVGTSDGKPTSPVKIIDCGE 174
Score = 31.9 bits (69), Expect = 0.45
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -2
Query: 727 YKGSIFHRVIPNFMLQGG 674
+KGS FHRVI FM QGG
Sbjct: 59 FKGSSFHRVIKGFMAQGG 76
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 61.7 bits (143), Expect = 5e-10
Identities = 31/50 (62%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Frame = -3
Query: 648 GKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSCWM 502
G+SI+G +FEDE + +L+H P LSMANAG +TNGSQFFITTV T W+
Sbjct: 538 GQSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATP-WL 586
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = -2
Query: 508 LDGRHVVFGNVVEGMEVVKQIE 443
LD +H VFG VV+GM+VV+ IE
Sbjct: 586 LDNKHTVFGRVVKGMDVVQGIE 607
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/45 (62%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = -3
Query: 648 GKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVK 517
G SI+G KF DE +LKH G+LSMAN+G +TNGSQFFIT K
Sbjct: 63 GTSIWGKKFNDEIRDSLKHNARGMLSMANSGPNTNGSQFFITYAK 107
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -2
Query: 727 YKGSIFHRVIPNFMLQGG 674
Y G+IFHR I FM+QGG
Sbjct: 37 YDGTIFHRNIKGFMIQGG 54
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Frame = -3
Query: 648 GKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFI 529
G+SI+G F+DE N L H+G GV+SMAN+G TNGSQFF+
Sbjct: 406 GESIWGKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFFV 446
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -2
Query: 727 YKGSIFHRVIPNFMLQGGTSPTITALG 647
Y G FHR I NFM+QGG PT T G
Sbjct: 380 YNGVAFHRSIRNFMIQGG-DPTGTGKG 405
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Frame = -2
Query: 535 LHHHCQDLLLDGRHVVFGNVVEGMEVVKQI--ETFGSQSGKTSKRIVIKDCGQIA*FKS 365
+H L +DG HVV G VVEG+++++ I E + + SK +VI DCG+++ ++S
Sbjct: 114 IHMKDYGLQVDGDHVVIGKVVEGLDLMRNIEKEVITTTTRTPSKPVVIADCGELSDYRS 172
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/41 (51%), Positives = 26/41 (63%)
Frame = -3
Query: 648 GKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFIT 526
G+SIY KF DE+ L+H G+LSM+ A D GS F IT
Sbjct: 86 GESIYAGKFPDESPKLRHEETGLLSMSIADRDKFGSHFHIT 126
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/42 (40%), Positives = 28/42 (66%)
Frame = -2
Query: 508 LDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQ 383
LD +VVFG +++G E++K+IE G + GK + + I CG+
Sbjct: 133 LDRNNVVFGKLIQGKEILKKIERVGDEEGKPTVSVKIIRCGE 174
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Frame = -3
Query: 648 GKSIYGNKFEDE-NFTLKHTGPGVLSMANAGA-DTNGSQFFITTVKTSCWM 502
G SIYG F DE + L+ + G+++MANA + ++NGSQFF T K W+
Sbjct: 75 GDSIYGGVFADEFHSRLRFSHRGIVAMANASSPNSNGSQFFFTLDKCD-WL 124
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = -2
Query: 727 YKGSIFHRVIPNFMLQGGTSPTITALGEIHLRQ*V*RREFH 605
+ +IFHRVIP F++QGG PT + G + V EFH
Sbjct: 49 FDNTIFHRVIPGFLVQGG-DPTGSGTGGDSIYGGVFADEFH 88
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 34.3 bits (75), Expect = 0.084
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Frame = -3
Query: 645 KSIYGNK---FEDE-NFTLKHTGPGVLSMANAGADTNGSQFFIT 526
K +YG + ++DE + LKH+ G ++MA+ G + N SQF+ T
Sbjct: 68 KFLYGEQARFYKDEIHLDLKHSKTGTVAMASGGENLNASQFYFT 111
Score = 32.3 bits (70), Expect = 0.34
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -2
Query: 508 LDGRHVVFGNVVEGMEVVKQI-ETFGSQSGKTSKRIVIK 395
LDG+H VFG + EG + + +I E + + K I IK
Sbjct: 119 LDGKHTVFGQIAEGFDTLTRINEAYVDPKNRPYKNIRIK 157
>At5g04200.1 68418.m00408 latex-abundant protein, putative (AMC9) /
caspase family protein similar to latex-abundant protein
[Hevea brasiliensis] gb:AAD13216; contains Pfam profile
PF00656: ICE-like protease (caspase) p20 domain
Length = 325
Score = 31.9 bits (69), Expect = 0.45
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +1
Query: 457 QLPCLQQHSQRQHVCHPAGGLDSGDEELGTISISTGISHGEDARSSVLKGEILVFKLI 630
QLP + CH G +D E++G S+S+ IS + + + L FK +
Sbjct: 133 QLPKGTSFTMISDSCHSGGLIDKEKEQIGPSSVSSNISPAIETTNKTITSRALPFKAV 190
>At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 290
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = -2
Query: 508 LDGRHVVFGNVVEGMEVVKQIET 440
LDG ++VFG V+EG++VV I +
Sbjct: 209 LDGGNIVFGTVLEGLDVVTSISS 231
>At3g02600.1 68416.m00251 phosphatidic acid phosphatase family
protein / PAP2 family protein similar to phosphatidic
acid phosphatase [Mus musculus] GI:1487873; contains
Pfam profile: PF01569 phosphatase PAP2 superfamily
Length = 364
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = -2
Query: 301 TFPVKNNLNEIWVIPIFNKILLLM*RTGYCIYFHALLVCSLLHFCYYIFISTSSLAVCLD 122
++P+K+N IW +P++ +L L+ IYF V L H + S AV D
Sbjct: 108 SYPLKSNTVPIWSVPVYAMLLPLV--IFIFIYFRRRDVYDLHHAVLGLLYSVLVTAVLTD 165
Query: 121 LNNSHYRRP 95
+ RP
Sbjct: 166 AIKNAVGRP 174
>At4g09150.1 68417.m01515 T-complex protein 11 contains Pfam
PF05794: T-complex protein 11
Length = 1097
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -1
Query: 665 NHNGTGGNPSTAISLKTRISPLSTLDLASSPW 570
NH+G+ G PST + +S +S ++ SSP+
Sbjct: 851 NHSGSSGLPSTTMRTGGNVSSVSKVNTPSSPF 882
>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -2
Query: 727 YKGSIFHRVIPNFMLQGGTSPT 662
+KG F RVI N+++Q G SP+
Sbjct: 117 FKGMPFQRVIKNYLVQAGHSPS 138
>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -2
Query: 727 YKGSIFHRVIPNFMLQGGTSPT 662
+KG F RVI N+++Q G SP+
Sbjct: 117 FKGMPFQRVIKNYLVQAGHSPS 138
>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -2
Query: 727 YKGSIFHRVIPNFMLQGGTSPT 662
+KG F RVI N+++Q G SP+
Sbjct: 117 FKGMPFQRVIKNYLVQAGHSPS 138
>At1g03590.1 68414.m00339 protein phosphatase 2C family protein /
PP2C family protein similar to protein phosphatase-2C;
PP2C (GI:3643088) [Mesembryanthemum crystallinum];
contains Pfam PF00481 : Protein phosphatase 2C domain;
Length = 447
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 485 KDNMSAIQQEVLTVVMKNWEPLVSAPALAMERTPGPVCLR 604
K + A+Q E V + W P +AP LAM R G CL+
Sbjct: 228 KGRVFALQDE--PEVSRVWLPFDNAPGLAMARAFGDFCLK 265
>At5g59930.1 68418.m07515 DC1 domain-containing protein / UV-B
light-insensitive protein, putative similar to ULI3
(UV-B light insensitive) [Arabidopsis thaliana]
GI:17225050; contains Pfam profile PF03107: DC1 domain
Length = 656
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 241 LLLM*RTGYCIYFHALLVCSLLHFCYYI 158
++L R G +YF C L+HF YY+
Sbjct: 629 VILKFREGNIVYFFCSRSCFLMHFSYYL 656
>At3g29080.1 68416.m03641 hypothetical protein
Length = 445
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 387 PQSLITILLEVFPDWLPKVSICLTTSMPSTTFPKTTCLPSSRRS 518
P SL T+ + F L + ++ + S S T P+T +PS RRS
Sbjct: 165 PSSLQTLACDTFR--LTRFTVKSSVSFGSPTSPETKLIPSLRRS 206
>At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase-2C GB:AAC36699
from [Mesembryanthemum crystallinum]
Length = 358
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 527 VMKNWEPLVSAPALAMERTPGPVCLR 604
V + W+P+ +P LAM R G C++
Sbjct: 242 VHRVWQPVDESPGLAMSRAFGDYCIK 267
>At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase-2C GB:AAC36699
from [Mesembryanthemum crystallinum]
Length = 358
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 527 VMKNWEPLVSAPALAMERTPGPVCLR 604
V + W+P+ +P LAM R G C++
Sbjct: 242 VHRVWQPVDESPGLAMSRAFGDYCIK 267
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,331,195
Number of Sequences: 28952
Number of extensions: 317081
Number of successful extensions: 832
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1594686376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -