Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00250
(505 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P25398 Cluster: 40S ribosomal protein S12; n=129; Eukar... 99 5e-20
UniRef50_Q9SKZ3 Cluster: 40S ribosomal protein S12-2; n=3; Magno... 89 5e-17
UniRef50_Q201W7 Cluster: 40S ribosomal protein S12; n=1; Acyrtho... 89 7e-17
UniRef50_Q5B5V7 Cluster: 40S ribosomal protein S12; n=1; Emerice... 83 3e-15
UniRef50_Q5DE28 Cluster: 40S ribosomal protein S12; n=2; Platyhe... 83 5e-15
UniRef50_A2YI73 Cluster: 40S ribosomal protein S12; n=5; Oryza s... 82 6e-15
UniRef50_Q54PX9 Cluster: 40S ribosomal protein S12; n=1; Dictyos... 78 1e-13
UniRef50_P48589 Cluster: 40S ribosomal protein S12; n=13; Saccha... 71 1e-11
UniRef50_Q8IGF9 Cluster: RH29995p; n=2; Drosophila melanogaster|... 68 1e-10
UniRef50_Q5CFW0 Cluster: 40S ribosomal protein S12; n=4; Apicomp... 68 1e-10
UniRef50_Q03253 Cluster: 40S ribosomal protein S12; n=10; Trypan... 66 3e-10
UniRef50_UPI0000D633F9 Cluster: UPI0000D633F9 related cluster; n... 62 9e-09
UniRef50_O97249 Cluster: 40S ribosomal protein S12; n=5; Plasmod... 60 3e-08
UniRef50_A7AM93 Cluster: 40S ribosomal protein S12, putative; n=... 54 2e-06
UniRef50_Q22W26 Cluster: 40S ribosomal protein S12; n=1; Tetrahy... 53 3e-06
UniRef50_A0EEB1 Cluster: 40S ribosomal protein S12; n=7; Paramec... 52 1e-05
UniRef50_Q7R1B2 Cluster: GLP_306_61647_62024; n=1; Giardia lambl... 47 2e-04
UniRef50_A0C845 Cluster: Chromosome undetermined scaffold_157, w... 42 0.010
UniRef50_UPI00004982F0 Cluster: 40S ribosomal protein S12; n=3; ... 40 0.042
UniRef50_Q3W1D8 Cluster: Catalytic domain of components of vario... 38 0.17
UniRef50_Q017M6 Cluster: Homology to unknown gene; n=1; Ostreoco... 38 0.17
UniRef50_Q3LWI8 Cluster: Ribosomal protein S12; n=1; Bigelowiell... 36 0.52
UniRef50_Q3SAE1 Cluster: Ribosomal protein L7A; n=2; Naegleria g... 34 1.6
UniRef50_Q140Y0 Cluster: Hypothetical exported protein; n=3; Bur... 34 2.1
UniRef50_Q5PB92 Cluster: Putative uncharacterized protein; n=1; ... 32 6.4
UniRef50_Q8GZ45 Cluster: Probable threonyl-tRNA synthetase, cyto... 32 6.4
UniRef50_UPI0001555481 Cluster: PREDICTED: similar to structural... 32 8.5
UniRef50_Q1X873 Cluster: Fanconi anemia B; n=3; Danio rerio|Rep:... 32 8.5
UniRef50_Q6ZDB7 Cluster: Putative pentatricopeptide (PPR) repeat... 32 8.5
UniRef50_A5C1P4 Cluster: Putative uncharacterized protein; n=1; ... 32 8.5
UniRef50_A6RWC0 Cluster: Putative uncharacterized protein; n=1; ... 32 8.5
>UniRef50_P25398 Cluster: 40S ribosomal protein S12; n=129;
Eukaryota|Rep: 40S ribosomal protein S12 - Homo sapiens
(Human)
Length = 132
Score = 99.1 bits (236), Expect = 5e-20
Identities = 39/59 (66%), Positives = 52/59 (88%)
Frame = +2
Query: 254 QHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 430
+HQI L+KVD+NKKLGEW GLCKID++G RK+VGCSCVV+KD+G+E+ A DV+++Y K
Sbjct: 71 EHQINLIKVDDNKKLGEWVGLCKIDREGNPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
Score = 91.5 bits (217), Expect = 1e-17
Identities = 49/98 (50%), Positives = 60/98 (61%)
Frame = +3
Query: 60 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEADKALDKRQAVLCVLAENCDEAAYKKLV 239
I +G MDVN ALQEVLKTALIH GL G+ EA KALDKRQA LCV A NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVQASNCDEPMYVKLV 65
Query: 240 QALCNNIRFHWSRLTTTKSLENGLVSARLTRMARQGKL 353
+AL + + ++ K L + ++ R K+
Sbjct: 66 EALLAEHQINLIKVDDNKKLGEWVGLCKIDREGNPRKV 103
>UniRef50_Q9SKZ3 Cluster: 40S ribosomal protein S12-2; n=3;
Magnoliophyta|Rep: 40S ribosomal protein S12-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 144
Score = 89.0 bits (211), Expect = 5e-17
Identities = 38/57 (66%), Positives = 47/57 (82%)
Frame = +2
Query: 257 HQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYL 427
H I L+ V + K LGEWAGLCKID +G ARK+VGCSC+VIKDFGEET AL+++K +L
Sbjct: 85 HSIKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCSCLVIKDFGEETTALNIVKKHL 141
Score = 68.9 bits (161), Expect = 6e-11
Identities = 30/59 (50%), Positives = 45/59 (76%)
Frame = +3
Query: 75 NMDVNVALQEVLKTALIHGGLVHGLHEADKALDKRQAVLCVLAENCDEAAYKKLVQALC 251
+MDV+ AL+ ++ + +GG+V GLHE+ K ++KR A LCVLAE+C++ Y KLV+ALC
Sbjct: 24 DMDVSTALELTVRKSRAYGGVVRGLHESAKLIEKRNAQLCVLAEDCNQPDYVKLVKALC 82
>UniRef50_Q201W7 Cluster: 40S ribosomal protein S12; n=1;
Acyrthosiphon pisum|Rep: 40S ribosomal protein S12 -
Acyrthosiphon pisum (Pea aphid)
Length = 136
Score = 88.6 bits (210), Expect = 7e-17
Identities = 36/64 (56%), Positives = 50/64 (78%)
Frame = +2
Query: 239 SGSVQQHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLK 418
+G ++ PL++VD+NK LGEW+GLCK D +G+ARK+VGCSCVV+K FG++T LD L
Sbjct: 68 TGLCAENSTPLIEVDSNKTLGEWSGLCKYDNNGQARKVVGCSCVVVKHFGDDTQELDTLL 127
Query: 419 DYLK 430
+ LK
Sbjct: 128 EILK 131
Score = 77.0 bits (181), Expect = 2e-13
Identities = 39/76 (51%), Positives = 51/76 (67%)
Frame = +3
Query: 24 MADVEVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHEADKALDKRQAVLCVLA 203
M+DVE V G + ++ L+EVLK A ++G L+HG+HE KAL+K+ VLCVLA
Sbjct: 1 MSDVEDAVEV-----GEHGEMYNLLKEVLKNAQVNGSLLHGIHEGTKALEKKLGVLCVLA 55
Query: 204 ENCDEAAYKKLVQALC 251
NC+EA YKKLV LC
Sbjct: 56 NNCEEAMYKKLVTGLC 71
>UniRef50_Q5B5V7 Cluster: 40S ribosomal protein S12; n=1; Emericella
nidulans|Rep: 40S ribosomal protein S12 - Emericella
nidulans (Aspergillus nidulans)
Length = 183
Score = 83.0 bits (196), Expect = 3e-15
Identities = 45/77 (58%), Positives = 53/77 (68%)
Frame = +3
Query: 24 MADVEVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHEADKALDKRQAVLCVLA 203
+A EVEVP +G M V AL+ VL+ ALIH GL GL EA KALD+RQA +CVL
Sbjct: 13 VAAEEVEVPAESG-AGGQMSVLDALKGVLRIALIHDGLARGLREAAKALDRRQAHMCVLN 71
Query: 204 ENCDEAAYKKLVQALCN 254
E C+E AYKKLV ALC+
Sbjct: 72 EGCEEEAYKKLVVALCS 88
Score = 49.6 bits (113), Expect(2) = 7e-11
Identities = 19/37 (51%), Positives = 29/37 (78%)
Frame = +2
Query: 320 KIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 430
++D++G ARK+V CSCVV+KD+GEE+ VL +Y +
Sbjct: 144 QLDREGNARKVVNCSCVVVKDWGEESQERSVLLNYFQ 180
Score = 39.1 bits (87), Expect(2) = 7e-11
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +2
Query: 254 QHQIPLVKVDNNKKLGEWAGLC 319
+H+IPL+KV + K LGEW GLC
Sbjct: 89 EHKIPLIKVPDGKMLGEWVGLC 110
>UniRef50_Q5DE28 Cluster: 40S ribosomal protein S12; n=2;
Platyhelminthes|Rep: 40S ribosomal protein S12 -
Schistosoma japonicum (Blood fluke)
Length = 131
Score = 82.6 bits (195), Expect = 5e-15
Identities = 35/54 (64%), Positives = 43/54 (79%)
Frame = +2
Query: 254 QHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVL 415
+H IPLVKV +NKKLGEW+GLCK DK+GKARK+V SC+V+ D GEE+ L L
Sbjct: 65 EHGIPLVKVPDNKKLGEWSGLCKYDKEGKARKVVSASCIVVTDIGEESYGLKYL 118
Score = 64.9 bits (151), Expect = 1e-09
Identities = 28/59 (47%), Positives = 43/59 (72%)
Frame = +3
Query: 78 MDVNVALQEVLKTALIHGGLVHGLHEADKALDKRQAVLCVLAENCDEAAYKKLVQALCN 254
MD++ A+Q+VLK A+ G+ GL++ K +++R VLC LA+NC+E AY L++ALCN
Sbjct: 6 MDLDSAVQQVLKNAVKCRGICRGLNQCTKLIEQRGVVLCFLADNCNEKAYTTLIEALCN 64
>UniRef50_A2YI73 Cluster: 40S ribosomal protein S12; n=5; Oryza
sativa|Rep: 40S ribosomal protein S12 - Oryza sativa
subsp. indica (Rice)
Length = 156
Score = 82.2 bits (194), Expect = 6e-15
Identities = 42/90 (46%), Positives = 56/90 (62%)
Frame = +3
Query: 30 DVEVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHEADKALDKRQAVLCVLAEN 209
+ +E P P+L G MD+ ALQ V+K + H GLV GL EA KA++K A LCVLAE+
Sbjct: 4 ETPIETPAAPVL-GEPMDLMTALQLVMKKSSAHDGLVKGLREAAKAIEKHAAQLCVLAED 62
Query: 210 CDEAAYKKLVQALCNNIRFHWSRLTTTKSL 299
CD+ Y KLV+ALC H + + K+L
Sbjct: 63 CDQPDYVKLVKALCAEHNVHLVTVPSAKTL 92
Score = 74.5 bits (175), Expect = 1e-12
Identities = 37/77 (48%), Positives = 50/77 (64%), Gaps = 18/77 (23%)
Frame = +2
Query: 254 QHQIPLVKVDNNKKLGEWAGL------------------CKIDKDGKARKIVGCSCVVIK 379
+H + LV V + K LGEWAGL CKID +GKARK+VGCSCVV+K
Sbjct: 78 EHNVHLVTVPSAKTLGEWAGLYEKPSCPGFNNTYCHSQLCKIDSEGKARKVVGCSCVVVK 137
Query: 380 DFGEETPALDVLKDYLK 430
D+GEE+ L++++DY+K
Sbjct: 138 DYGEESEGLNIVQDYVK 154
>UniRef50_Q54PX9 Cluster: 40S ribosomal protein S12; n=1;
Dictyostelium discoideum AX4|Rep: 40S ribosomal protein
S12 - Dictyostelium discoideum AX4
Length = 136
Score = 78.2 bits (184), Expect = 1e-13
Identities = 33/58 (56%), Positives = 44/58 (75%)
Frame = +2
Query: 254 QHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYL 427
+H IPL++V +NK LGEWAGLCK+DKD ARK+V CS +VIK FG+E+ L +Y+
Sbjct: 76 EHNIPLIEVPDNKALGEWAGLCKLDKDLAARKVVACSTLVIKTFGKESDDYKFLMEYI 133
Score = 68.9 bits (161), Expect = 6e-11
Identities = 43/112 (38%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Frame = +3
Query: 57 PILSGN----NMDVNVALQEVLKTALIHGGLVHGLHEADKALDKRQAVLCVLAENCDEAA 224
P+++ N N D VALQ+V+K +L G+ GLHE KALDKR A LCVLA NCDE
Sbjct: 6 PVIAANPLEKNTDPMVALQKVIKESLAVQGVARGLHETVKALDKRTARLCVLASNCDEPN 65
Query: 225 YKKLVQALCNNIRFHWSRLTTTKSLENGLVSARLTRMARQGKLSAAPVLSSK 380
+ +LV+AL + K+L +L + K+ A L K
Sbjct: 66 FVRLVKALATEHNIPLIEVPDNKALGEWAGLCKLDKDLAARKVVACSTLVIK 117
>UniRef50_P48589 Cluster: 40S ribosomal protein S12; n=13;
Saccharomycetales|Rep: 40S ribosomal protein S12 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 143
Score = 70.9 bits (166), Expect = 1e-11
Identities = 29/57 (50%), Positives = 46/57 (80%)
Frame = +2
Query: 254 QHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDY 424
++++PL+KV + K+LGEWAGL KID++G ARK+VG S VV+K++G ET L ++ ++
Sbjct: 83 ENKVPLIKVADAKQLGEWAGLGKIDREGNARKVVGASVVVVKNWGAETDELSMIMEH 139
Score = 57.2 bits (132), Expect = 2e-07
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Frame = +3
Query: 24 MADVE--VEVPTNPILSGN-NMDVNVALQEVLKTALIHGGLVHGLHEADKALDKRQAVLC 194
M+DVE VEV ++ + + AL+ VL+TAL+H GL GL E+ KAL + +A+L
Sbjct: 1 MSDVEEVVEVQEETVVEQTAEVTIEDALKVVLRTALVHDGLARGLRESTKALTRGEALLV 60
Query: 195 VLAENCDEAAYKKLVQALCNN 257
VL + EA KLV+ L N+
Sbjct: 61 VLVSSVTEANIIKLVEGLAND 81
>UniRef50_Q8IGF9 Cluster: RH29995p; n=2; Drosophila
melanogaster|Rep: RH29995p - Drosophila melanogaster
(Fruit fly)
Length = 127
Score = 67.7 bits (158), Expect = 1e-10
Identities = 34/53 (64%), Positives = 43/53 (81%), Gaps = 1/53 (1%)
Frame = +3
Query: 21 TMADVEVEVPTN-PILSGNNMDVNVALQEVLKTALIHGGLVHGLHEADKALDK 176
TMADV+V+VP+ P+L G MD+N ALQEVLK +LI GL+HG+H+A KALDK
Sbjct: 16 TMADVDVDVPSAAPVLDGA-MDINTALQEVLKKSLIADGLIHGIHQACKALDK 67
>UniRef50_Q5CFW0 Cluster: 40S ribosomal protein S12; n=4;
Apicomplexa|Rep: 40S ribosomal protein S12 -
Cryptosporidium hominis
Length = 143
Score = 67.7 bits (158), Expect = 1e-10
Identities = 32/78 (41%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Frame = +3
Query: 24 MADVEVEVPTNPILSGNNM--DVNVALQEVLKTALIHGGLVHGLHEADKALDKRQAVLCV 197
M+DVE++ + + D+ A++ VLK + + GGL+ GL+E ALD ++A +C
Sbjct: 1 MSDVEIDQEGTQVQVEQEVVNDLTTAIRYVLKNSFVRGGLLRGLNEVVLALDSKKAQVCF 60
Query: 198 LAENCDEAAYKKLVQALC 251
LAE+C+E YK+LV+ALC
Sbjct: 61 LAESCEEDCYKQLVEALC 78
Score = 62.5 bits (145), Expect = 5e-09
Identities = 26/59 (44%), Positives = 42/59 (71%)
Frame = +2
Query: 251 QQHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYL 427
++ IPL+ V ++K+LGE AGLCK+D++G RK+VG + V I D+G E+ A L+ ++
Sbjct: 79 RERGIPLIMVPDSKELGEMAGLCKVDREGNPRKVVGAASVAIVDYGVESEAYHYLQKHI 137
>UniRef50_Q03253 Cluster: 40S ribosomal protein S12; n=10;
Trypanosomatidae|Rep: 40S ribosomal protein S12 -
Trypanosoma brucei brucei
Length = 144
Score = 66.5 bits (155), Expect = 3e-10
Identities = 28/60 (46%), Positives = 40/60 (66%)
Frame = +2
Query: 251 QQHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 430
+Q+ I LV +D +KL +WAGL ++ DG RK + CSC+ ++DFGE T ALD L L+
Sbjct: 85 KQNNIDLVSMDEREKLAQWAGLTRMAADGSVRKTLKCSCLAVRDFGERTKALDYLLSQLQ 144
Score = 58.4 bits (135), Expect = 9e-08
Identities = 40/89 (44%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Frame = +3
Query: 93 ALQEVLKTALIHGGLVHGLHEADKALDKRQAVLCVLAENCDEAAYKKLVQALC--NNIRF 266
AL+ VL A GL+ GL E +ALD+R A LCVLA++C++ YKKLV AL NNI
Sbjct: 32 ALRIVLMKARETNGLICGLSEVTRALDRRTAHLCVLADDCEDEEYKKLVTALAKQNNI-- 89
Query: 267 HWSRLTTTKSLENGLVSARLTRMARQGKL 353
L + E A LTRMA G +
Sbjct: 90 ---DLVSMDEREKLAQWAGLTRMAADGSV 115
>UniRef50_UPI0000D633F9 Cluster: UPI0000D633F9 related cluster; n=1;
Mus musculus|Rep: UPI0000D633F9 UniRef100 entry - Mus
musculus
Length = 132
Score = 61.7 bits (143), Expect = 9e-09
Identities = 25/59 (42%), Positives = 41/59 (69%)
Frame = +2
Query: 254 QHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 430
+HQI L+K D+ + L EW + D++GK+ K+V C+ VV+K +G+E+ A D +K+Y K
Sbjct: 71 EHQISLIKDDDKRNLREWGRPLQTDQEGKSNKVVVCNSVVVKGYGKESQAKDDIKEYFK 129
Score = 32.3 bits (70), Expect = 6.4
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +3
Query: 60 ILSGNNMDVNVALQEVLKTALIHGG-LVHGLHEADKALDKRQAVLCVLAENCDEAAYKKL 236
+L + +D+N L +VL A H G LV + A A L NC+E Y KL
Sbjct: 6 LLGESKIDINTDLGDVLTYAPSHDGKLVQDTNTAKLPRPSTSAKLS-FPVNCNEPMYVKL 64
Query: 237 VQALC 251
V+A C
Sbjct: 65 VKAHC 69
>UniRef50_O97249 Cluster: 40S ribosomal protein S12; n=5;
Plasmodium|Rep: 40S ribosomal protein S12 - Plasmodium
falciparum (isolate 3D7)
Length = 141
Score = 60.1 bits (139), Expect = 3e-08
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = +2
Query: 254 QHQIPLVKVDNNKK-LGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVL 415
+ IPL V N+ K LG WAGL K+D +G ARKI+G S V + DFGE++ D L
Sbjct: 78 EKNIPLFMVQNDSKDLGHWAGLFKLDNEGNARKIIGASSVAVVDFGEDSAEKDFL 132
Score = 59.3 bits (137), Expect = 5e-08
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +3
Query: 24 MADVEVEVPTNPILSGNNMDVNV-ALQEVLKTALIHGGLVHGLHEADKALDKRQAVLCVL 200
M+DVE N ++ + NV A+Q+V+K A +H GL G+ E K+++ ++A +C L
Sbjct: 1 MSDVE-SADNNVVVEEKAVFDNVTAIQKVIKNAHVHDGLKIGIREVIKSIESQEAKVCFL 59
Query: 201 AENCDEAAYKKLVQALC 251
++ C E AYKKL+ LC
Sbjct: 60 SDVCSEPAYKKLITTLC 76
>UniRef50_A7AM93 Cluster: 40S ribosomal protein S12, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S12, putative -
Babesia bovis
Length = 167
Score = 53.6 bits (123), Expect = 2e-06
Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Frame = +2
Query: 251 QQHQIPLVKVD-NNKKLGEWAGLCKIDKDGKARKIVGCSCVVI-KDFGEETPALDVLKDY 424
++H +P ++ + +++K+GEWAGLCK D +G ARKIVG + V I +F E++ + + +
Sbjct: 103 KEHGVPCIETEFDSEKIGEWAGLCKYDIEGVARKIVGATSVAITNNFDEKSESAEEMISL 162
Query: 425 LK 430
+K
Sbjct: 163 IK 164
Score = 49.6 bits (113), Expect = 4e-05
Identities = 21/52 (40%), Positives = 34/52 (65%)
Frame = +3
Query: 96 LQEVLKTALIHGGLVHGLHEADKALDKRQAVLCVLAENCDEAAYKKLVQALC 251
LQ +L A+ +G L+ G+H+ KA++ + A CV++ E AY KL++ALC
Sbjct: 51 LQRLLHLAMANGCLLRGIHQVTKAIEAKNARACVVSTQTSEEAYLKLIRALC 102
>UniRef50_Q22W26 Cluster: 40S ribosomal protein S12; n=1;
Tetrahymena thermophila SB210|Rep: 40S ribosomal protein
S12 - Tetrahymena thermophila SB210
Length = 126
Score = 53.2 bits (122), Expect = 3e-06
Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Frame = +3
Query: 63 LSGNNMDVNVALQEVLKTALIHGGLVHGLHEADKALDKRQAVLCVLAENCDEAAYKKLVQ 242
++ N +N L +V+K++ + GLHE + ++ +QA+ +AE+CD+ Y KLV+
Sbjct: 1 MADQNQQLNEVLAKVIKSSNCQDAISKGLHEVLRTIEAKQALFVCVAEDCDQGNYVKLVK 60
Query: 243 ALC--NNIRF 266
ALC N I++
Sbjct: 61 ALCAKNEIKY 70
Score = 32.7 bits (71), Expect = 4.8
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 254 QHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEE 394
+++I V V LGE+ G + G+ +K+ GCS + I+ + E
Sbjct: 65 KNEIKYVSVPKRASLGEYLGHFTANAKGEIKKVKGCSSLAIRKYAPE 111
>UniRef50_A0EEB1 Cluster: 40S ribosomal protein S12; n=7; Paramecium
tetraurelia|Rep: 40S ribosomal protein S12 - Paramecium
tetraurelia
Length = 129
Score = 51.6 bits (118), Expect = 1e-05
Identities = 24/56 (42%), Positives = 36/56 (64%)
Frame = +3
Query: 96 LQEVLKTALIHGGLVHGLHEADKALDKRQAVLCVLAENCDEAAYKKLVQALCNNIR 263
L+ V++T+L G L G+HE KA++ +QA VLA++C E YKKL+ AL +
Sbjct: 14 LKRVVQTSLHRGLLAKGVHEVCKAIESKQAKFVVLADDCTEDTYKKLIVALAKQFQ 69
Score = 38.3 bits (85), Expect = 0.097
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = +2
Query: 251 QQHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEE 394
+Q QIP+ KV+ LGEW G+ K K K CS V +K F E
Sbjct: 66 KQFQIPVWKVEKGALLGEWIGISKFLTKTKKIKSRKCSSVALKHFAIE 113
>UniRef50_Q7R1B2 Cluster: GLP_306_61647_62024; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_306_61647_62024 - Giardia lamblia
ATCC 50803
Length = 125
Score = 47.2 bits (107), Expect = 2e-04
Identities = 22/68 (32%), Positives = 37/68 (54%)
Frame = +3
Query: 96 LQEVLKTALIHGGLVHGLHEADKALDKRQAVLCVLAENCDEAAYKKLVQALCNNIRFHWS 275
L+E K GLV G + K L++++A +C LA +C+E Y +V+ LC + H
Sbjct: 10 LKETFKRIHNMDGLVTGHRQVFKYLERKRAKICFLASDCEEKQYADIVECLCKEYKVHLC 69
Query: 276 RLTTTKSL 299
+ T ++L
Sbjct: 70 KKFTRRTL 77
>UniRef50_A0C845 Cluster: Chromosome undetermined scaffold_157,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_157,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 779
Score = 41.5 bits (93), Expect = 0.010
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +3
Query: 162 KALDKRQAVLCVLAENCDEAAYKKLVQALCNNIRFH-WSRLTTTKSLENGLV-SARLTRM 335
KA++ +QA VLA++C E YKKLV AL + W LENGL + L R
Sbjct: 55 KAIESKQAKFIVLADDCSEDTYKKLVIALAKQFQIPVWKVEKGVLYLENGLAFQSSLLRQ 114
Query: 336 ARQGKLSA 359
R + +A
Sbjct: 115 RRSNQENA 122
>UniRef50_UPI00004982F0 Cluster: 40S ribosomal protein S12; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S12 - Entamoeba histolytica HM-1:IMSS
Length = 136
Score = 39.5 bits (88), Expect = 0.042
Identities = 15/52 (28%), Positives = 30/52 (57%)
Frame = +3
Query: 96 LQEVLKTALIHGGLVHGLHEADKALDKRQAVLCVLAENCDEAAYKKLVQALC 251
++ +L A L G+ + K ++ ++A+ C +AE+CD Y L++A+C
Sbjct: 26 IKAILYQARAQNALTKGIRQCLKVIEAKKALYCFIAEDCDNDKYTGLLKAIC 77
Score = 38.7 bits (86), Expect = 0.074
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +2
Query: 251 QQHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVI 376
++ + +V V +LGEW CKI +DG A +I CSC ++
Sbjct: 78 KEQGVKIVMVPQKIQLGEWTNQCKI-RDGAAVRIAKCSCAIV 118
>UniRef50_Q3W1D8 Cluster: Catalytic domain of components of various
dehydrogenase complexes; n=4; Actinomycetales|Rep:
Catalytic domain of components of various dehydrogenase
complexes - Frankia sp. EAN1pec
Length = 294
Score = 37.5 bits (83), Expect = 0.17
Identities = 22/61 (36%), Positives = 30/61 (49%)
Frame = +3
Query: 81 DVNVALQEVLKTALIHGGLVHGLHEADKALDKRQAVLCVLAENCDEAAYKKLVQALCNNI 260
D N AL+ L+T + H VHG DK LD R+ VL + N E + +QA +
Sbjct: 110 DANAALRGGLRTRVAHYPFVHGKLTLDKVLDGRRVVLGTVVPNLHEVGLAE-IQAHLERV 168
Query: 261 R 263
R
Sbjct: 169 R 169
>UniRef50_Q017M6 Cluster: Homology to unknown gene; n=1;
Ostreococcus tauri|Rep: Homology to unknown gene -
Ostreococcus tauri
Length = 473
Score = 37.5 bits (83), Expect = 0.17
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = -1
Query: 442 LARRLEVVLEHIQRWSFLAEIFDDNTGAADNFPCLAILVNLAETSPFSK 296
+AR L+ VL+H +R FL E+ D + A N A V LA+TSP ++
Sbjct: 295 VARVLQEVLKHAERRGFLTEVADHDARALHNLTRGAFGVELAQTSPLTE 343
>UniRef50_Q3LWI8 Cluster: Ribosomal protein S12; n=1; Bigelowiella
natans|Rep: Ribosomal protein S12 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 110
Score = 35.9 bits (79), Expect = 0.52
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +3
Query: 78 MDVNVALQEVLKTALIHGGLVHGLHEADKALDKRQAVLCVLAENCDEAAYKKLVQALC 251
M + L+ ++K A +V G+ E K + + C+LA+NC++ YK ++ LC
Sbjct: 1 MIIEKFLKILIKEATKKNLIVKGIKETIKFIIRGYGYACILAKNCNKKQYKIAIKTLC 58
>UniRef50_Q3SAE1 Cluster: Ribosomal protein L7A; n=2; Naegleria
gruberi|Rep: Ribosomal protein L7A - Naegleria gruberi
Length = 258
Score = 34.3 bits (75), Expect = 1.6
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +3
Query: 135 LVHGLHEADKALDKRQAVLCVLAENCDEAAYKKLVQALCNNI 260
L+HG++E KA++++QA L V+A + + + ALC +
Sbjct: 135 LIHGINEVVKAVERKQASLVVIAHDVEPIELVLFLPALCKKL 176
>UniRef50_Q140Y0 Cluster: Hypothetical exported protein; n=3;
Burkholderia|Rep: Hypothetical exported protein -
Burkholderia xenovorans (strain LB400)
Length = 157
Score = 33.9 bits (74), Expect = 2.1
Identities = 28/107 (26%), Positives = 46/107 (42%)
Frame = +3
Query: 123 IHGGLVHGLHEADKALDKRQAVLCVLAENCDEAAYKKLVQALCNNIRFHWSRLTTTKSLE 302
+ G L + A + LD+ + + + AA + L A +IR L +T +
Sbjct: 36 VAGKLNNAAQVAGQKLDQAASYIGQQVDATKSAAQQNLESASAPSIRIDPGALASTA--Q 93
Query: 303 NGLVSARLTRMARQGKLSAAPVLSSKISARKLQRWMCSRTTSSRRAN 443
L SA A+ GK ++ S + + RKLQ W + SS A+
Sbjct: 94 ANLQSAASATNAQLGKAASLTGQSLESAGRKLQEWSAQSSASSANAS 140
>UniRef50_Q5PB92 Cluster: Putative uncharacterized protein; n=1;
Anaplasma marginale str. St. Maries|Rep: Putative
uncharacterized protein - Anaplasma marginale (strain St.
Maries)
Length = 1013
Score = 32.3 bits (70), Expect = 6.4
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = -2
Query: 249 TEPEQVSCMRLHHSSQPKHIVLLASCQELY-RLREDRAQDHHG-LKLSLAPLAVLHSR 82
T+PEQV+C ++ + + K + + +Y + RE R+Q HG L+ AP H +
Sbjct: 836 TDPEQVACFKIENMAS-KDSLPFTDAEAMYNKTREKRSQHKHGDLQTQQAPTKEKHQK 892
>UniRef50_Q8GZ45 Cluster: Probable threonyl-tRNA synthetase,
cytoplasmic; n=2; Arabidopsis thaliana|Rep: Probable
threonyl-tRNA synthetase, cytoplasmic - Arabidopsis
thaliana (Mouse-ear cress)
Length = 458
Score = 32.3 bits (70), Expect = 6.4
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +3
Query: 168 LDKRQAVLCVLAENCDEAAYKKLVQALCNNIRFHWSRLTTTKSLENGLVSAR 323
L RQA++C L+E+C ++Y K VQ N + ++ + +SL + AR
Sbjct: 355 LSPRQAIVCSLSEDC--SSYAKQVQKQINEVGYYVDIDESDRSLRKKVADAR 404
>UniRef50_UPI0001555481 Cluster: PREDICTED: similar to structural
maintenance of chromosomes 1B; n=3; Mammalia|Rep:
PREDICTED: similar to structural maintenance of
chromosomes 1B - Ornithorhynchus anatinus
Length = 1329
Score = 31.9 bits (69), Expect = 8.5
Identities = 20/86 (23%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Frame = +3
Query: 135 LVHGLHEADKALDKRQAVLCVLAENCDEAAYKKLVQALCNNIRF---HWSRLTTTKSLEN 305
L+HG H + + EN +E + +++ C+ RF H SR LE
Sbjct: 35 LIHGAHIGKPVSTTASVKVVYIEENGEEKTFSRIIHGDCSEFRFNDNHVSRSAYAAELEK 94
Query: 306 -GLVSARLTRMARQGKLSAAPVLSSK 380
G++S + QG + + + K
Sbjct: 95 IGIISKARNCLVFQGTVESIAMKKPK 120
>UniRef50_Q1X873 Cluster: Fanconi anemia B; n=3; Danio rerio|Rep:
Fanconi anemia B - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 807
Score = 31.9 bits (69), Expect = 8.5
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Frame = +3
Query: 165 ALD--KRQAVLCVLAENCDE--AAYKKLVQALCNNIRFH 269
ALD KRQ V CVL C + +A+K ++ ++CN+++ H
Sbjct: 71 ALDQQKRQKVPCVLLRLCKKRASAFKYMLYSICNDLKLH 109
>UniRef50_Q6ZDB7 Cluster: Putative pentatricopeptide (PPR)
repeat-containing protein; n=2; Oryza sativa|Rep:
Putative pentatricopeptide (PPR) repeat-containing
protein - Oryza sativa subsp. japonica (Rice)
Length = 735
Score = 31.9 bits (69), Expect = 8.5
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +3
Query: 84 VNVALQEVLKTALIHGGLVHGLHEADKALDKRQAVLCVLAENC--DEAAYKKLVQALCNN 257
V + L+ L+TA + L+HGL A + + + A++C D Y +V LC
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190
Query: 258 IRFHWSRLTTTKSLENG 308
R + + +++ NG
Sbjct: 191 GRTEEAEVLLEEAMSNG 207
>UniRef50_A5C1P4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 545
Score = 31.9 bits (69), Expect = 8.5
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 132 GLVHGLHEADKALDKRQAVLCVLAENCDEAAYKKLVQALCNNIRFHWS 275
G+V GLH +++ QA L V+A+ D + + LC I ++
Sbjct: 290 GVVDGLHHITYYIEQNQAQLAVIAQEVDPIEFAVWLSVLCQKIEVFYA 337
>UniRef50_A6RWC0 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1073
Score = 31.9 bits (69), Expect = 8.5
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Frame = +3
Query: 36 EVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHEADKALDKRQAV-LCVLAENC 212
EV+ T NN + +AL + A + HE D+ + QA+ L ++A C
Sbjct: 96 EVKDLTVATRDSNNDGMPIALGVRGRLAALWSEDTMKAHE-DRLHGQVQALQLLLMAGQC 154
Query: 213 DEAAYKKLVQALCNNIRFHWSRLTTTKSLENGLVSARLTRMARQGKLSAA 362
+A +K + AL N R TKSL ++++R ARQ L ++
Sbjct: 155 RDAVTQKSLLALKENQRLIQKVADDTKSLRESSAGSQVSRSARQSILGSS 204
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 487,433,161
Number of Sequences: 1657284
Number of extensions: 9213373
Number of successful extensions: 28591
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 27741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28583
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30110042232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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