Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00250
         (505 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   1.6  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   2.1  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   4.7  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   6.3  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   6.3  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   8.3  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   8.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.3  

>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/40 (25%), Positives = 21/40 (52%)
 Frame = +3

Query: 48  PTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHEADKA 167
           P N I+SGN + +  + + + K     G L + +++ + A
Sbjct: 43  PVNDIISGNILPLYTSAENIFKQLREWGRLYYPIYKLNAA 82


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 132 HHGLKLSLAPLAVLHSRPCCY 70
           H G+  +  P+ VLH  P C+
Sbjct: 181 HMGVHRAKPPMRVLHQCPVCH 201


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = +3

Query: 48  PTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHEADKA 167
           P N I+SGN   +  + + + K     G L + +++ + A
Sbjct: 43  PVNDIISGNIPPLYTSAENIFKQLREWGRLYYPIYKLNAA 82


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 11/38 (28%), Positives = 15/38 (39%)
 Frame = -2

Query: 216 HHSSQPKHIVLLASCQELYRLREDRAQDHHGLKLSLAP 103
           HHS  P H V  A+  E           + G +L  +P
Sbjct: 52  HHSHMPPHSVFAANNAEFPEFVHSGMVHNDGTQLMPSP 89


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 11/38 (28%), Positives = 15/38 (39%)
 Frame = -2

Query: 216 HHSSQPKHIVLLASCQELYRLREDRAQDHHGLKLSLAP 103
           HHS  P H V  A+  E           + G +L  +P
Sbjct: 52  HHSHMPPHSVFAANNAEFPEFVHSGMVHNDGTQLMPSP 89


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 81  PCCYPTRWG 55
           PCC PT+ G
Sbjct: 335 PCCVPTQLG 343


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 7   SNSQQPWLMLKSRSPPTPSCRVTT 78
           S    P+ +L  R+PP P   VT+
Sbjct: 337 STGFSPYEILYGRTPPNPLDAVTS 360


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 5/9 (55%), Positives = 6/9 (66%)
 Frame = -2

Query: 75   CYPTRWGWW 49
            CY T W W+
Sbjct: 1402 CYFTNWAWY 1410



 Score = 20.6 bits (41), Expect = 8.3
 Identities = 5/9 (55%), Positives = 6/9 (66%)
 Frame = -2

Query: 75   CYPTRWGWW 49
            CY T W W+
Sbjct: 1827 CYFTNWAWY 1835



 Score = 20.6 bits (41), Expect = 8.3
 Identities = 5/9 (55%), Positives = 6/9 (66%)
 Frame = -2

Query: 75   CYPTRWGWW 49
            CY T W W+
Sbjct: 2325 CYFTNWAWY 2333


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -1

Query: 373 DNTGAADNFPCLAILVNLAETSPFSKLFVVV 281
           + +G+  N  CL I V + +   +   FV+V
Sbjct: 52  EESGSMANQKCLEITVKILKIVAYLVTFVIV 82


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -1

Query: 373 DNTGAADNFPCLAILVNLAETSPFSKLFVVV 281
           + +G+  N  CL I V + +   +   FV+V
Sbjct: 52  EESGSMANQKCLEITVKILKIVAYLVTFVIV 82


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -1

Query: 373 DNTGAADNFPCLAILVNLAETSPFSKLFVVV 281
           + +G+  N  CL I V + +   +   FV+V
Sbjct: 52  EESGSMANQKCLEITVKILKIVAYLVTFVIV 82


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -1

Query: 373 DNTGAADNFPCLAILVNLAETSPFSKLFVVV 281
           + +G+  N  CL I V + +   +   FV+V
Sbjct: 52  EESGSMANQKCLEITVKILKIVAYLVTFVIV 82


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,834
Number of Sequences: 336
Number of extensions: 2316
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)