Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00247
         (740 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.0  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   4.5  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   7.9  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   7.9  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 7/21 (33%), Positives = 16/21 (76%)
 Frame = +1

Query: 172 KRPMSAYMLWLNSAREQIKSE 234
           K+P++A+ML++   R ++ +E
Sbjct: 480 KKPLNAFMLYMKEMRAKVVAE 500


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 7/21 (33%), Positives = 16/21 (76%)
 Frame = +1

Query: 172 KRPMSAYMLWLNSAREQIKSE 234
           K+P++A+ML++   R ++ +E
Sbjct: 372 KKPLNAFMLYMKEMRAKVVAE 392


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 660 IIFNCNWYFVYKMPLNNSFLDSIFL 734
           +IF  NWY    + + NS L+ IFL
Sbjct: 86  LIFLVNWYPRLIIGIMNSTLNLIFL 110


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 144 PDGKNFEIIFELVHN 100
           P G NFEI FE  +N
Sbjct: 319 PAGSNFEIGFENYYN 333


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = +1

Query: 19  DGPKLASTGNILFEPHTFLHILYVYSLVVYQFKNYF 126
           DG  L  TG  +     F+H  Y  + + +   N+F
Sbjct: 92  DGLMLDKTGICVSNVFDFVHFYYPVATMSFYVLNFF 127


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,278
Number of Sequences: 336
Number of extensions: 3041
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)