Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00246X
(381 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81532-2|CAB04324.1| 290|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z78542-6|CAB01749.2| 695|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z93383-11|CAI58635.1| 279|Caenorhabditis elegans Hypothetical p... 28 2.6
AC006656-2|AAF39880.1| 326|Caenorhabditis elegans Hypothetical ... 28 2.6
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z69646-7|CAA93471.3| 1484|Caenorhabditis elegans Hypothetical pr... 27 3.4
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 27 3.4
L07144-10|AAK21437.1| 1327|Caenorhabditis elegans Hypothetical p... 27 4.5
AF016421-10|AAC25792.1| 473|Caenorhabditis elegans Hypothetical... 27 4.5
Z92832-4|CAB07373.1| 488|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical pr... 27 6.0
AC024798-12|AAK29920.2| 1725|Caenorhabditis elegans Hypothetical... 27 6.0
Z68132-2|CAA92220.2| 762|Caenorhabditis elegans Hypothetical pr... 26 7.9
AL117195-17|CAB60767.1| 534|Caenorhabditis elegans Hypothetical... 26 7.9
AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical ... 26 7.9
>Z81532-2|CAB04324.1| 290|Caenorhabditis elegans Hypothetical
protein F36F2.2 protein.
Length = 290
Score = 28.7 bits (61), Expect = 1.5
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 244 KALHWFHHQKLKLTEREEAAPKMPRGQRFSL 152
K L H ++ T EE+ P P+GQRF L
Sbjct: 163 KGLEEVHEIEVDKTVIEESIPNQPKGQRFDL 193
>Z78542-6|CAB01749.2| 695|Caenorhabditis elegans Hypothetical
protein F20D1.7 protein.
Length = 695
Score = 28.7 bits (61), Expect = 1.5
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 46 IAIAAMAAVTNLSNVLKN-GNDNFTARMFTEVV-KNNPGKSVVLSAFSVLPPLAQLALAS 219
+A+ ++ + N+L+N G D+ R V+ +NN KS+ + F +P L L L+
Sbjct: 124 MALTSLLELDLSDNMLENLGADSIHIRSIQRVILRNNQIKSIGVHVFRYMPTLKMLDLSG 183
Query: 220 DGET 231
+ T
Sbjct: 184 NNMT 187
>Z93383-11|CAI58635.1| 279|Caenorhabditis elegans Hypothetical
protein F54B8.16 protein.
Length = 279
Score = 27.9 bits (59), Expect = 2.6
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -2
Query: 137 TSVNILAVKLSFPFLSTLERFVTAAIAAMAIVNKQMIVFMFV 12
TSV + +K +F F+ TLERF++ N++ I F ++
Sbjct: 87 TSVTMGIIKGTFAFMITLERFISVFFPIHYRNNRRKIPFYWI 128
>AC006656-2|AAF39880.1| 326|Caenorhabditis elegans Hypothetical
protein H12I13.2 protein.
Length = 326
Score = 27.9 bits (59), Expect = 2.6
Identities = 15/57 (26%), Positives = 24/57 (42%)
Frame = +1
Query: 76 NLSNVLKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETNEELL 246
NLS + N + +++ N PG L F+ P L ++ DG N+ L
Sbjct: 66 NLSTGIANNGSSCWLNCLIQIMFNTPGVEFSLHQFATKPFLERMRDTKDGNRNKVAL 122
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.5 bits (58), Expect = 3.4
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Frame = -1
Query: 135 FGKHSGCEVIVSIFEYIREICDG--CHCRDG---DSKQTNDCLHV 16
FG + GC+ I + ++ DG CHCRDG D + +C+ +
Sbjct: 4095 FGNNGGCKHICT------DVRDGFYCHCRDGFRPDPQSPKECIDI 4133
>Z69646-7|CAA93471.3| 1484|Caenorhabditis elegans Hypothetical
protein F57C7.4 protein.
Length = 1484
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 130 TEVVKNNPGKSVVLSAFSVLPPLAQLAL 213
T ++KN P KS V +F++ P QLA+
Sbjct: 674 TTIIKNVPSKSDVFVSFTIPPAGTQLAM 701
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.5 bits (58), Expect = 3.4
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Frame = -1
Query: 135 FGKHSGCEVIVSIFEYIREICDG--CHCRDG---DSKQTNDCLHV 16
FG + GC+ I + ++ DG CHCRDG D + +C+ +
Sbjct: 4095 FGNNGGCKHICT------DVRDGFYCHCRDGFRPDPQSPKECIDI 4133
>L07144-10|AAK21437.1| 1327|Caenorhabditis elegans Hypothetical
protein R05D3.11 protein.
Length = 1327
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -1
Query: 105 VSIFEYIREICDGCHCRDGDSKQTNDC 25
V I R+ C GC C DGD + C
Sbjct: 950 VDISSVSRDFCSGCSC-DGDCSDASKC 975
>AF016421-10|AAC25792.1| 473|Caenorhabditis elegans Hypothetical
protein F44E7.7 protein.
Length = 473
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 149 LFFTTSVNILAVKLSFPFLSTLE 81
LFF S +L V + FPFL+T E
Sbjct: 443 LFFIVSGIVLIVNIPFPFLTTAE 465
>Z92832-4|CAB07373.1| 488|Caenorhabditis elegans Hypothetical
protein F31D4.5 protein.
Length = 488
Score = 26.6 bits (56), Expect = 6.0
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +1
Query: 157 KSVVLSAFSVLPPLAQLALASDGETNEELLKAMASLTTMLY 279
K+ +L A LP A + ASD +T E LKA+ S T + Y
Sbjct: 156 KNCLLIAHPQLPS-AIIVAASDHQTQEMWLKALRSATKISY 195
>Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical
protein F01G10.5 protein.
Length = 824
Score = 26.6 bits (56), Expect = 6.0
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1
Query: 76 NLSNVLKNGNDNFTARMFTEVVKNNPGKSVVLS 174
+L+ L GNDN T ++ P KSV S
Sbjct: 658 SLAEFLSKGNDNETLEEMMRLIAQTPRKSVAFS 690
>AC024798-12|AAK29920.2| 1725|Caenorhabditis elegans Hypothetical
protein Y48G9A.1 protein.
Length = 1725
Score = 26.6 bits (56), Expect = 6.0
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 184 VLPPLAQLALASDGE-TNEELLKAMASLTTMLYDQISRLKAVIFVQLKALSLKWRLRYPS 360
V+PP+ + ALA + E LKA L + Y +R + +QL + WR+RY S
Sbjct: 842 VVPPILK-ALADENEYVRASALKAGQRLISQ-YCSHARKLLLPQLQLALMDENWRIRYAS 899
Query: 361 MMV 369
+ +
Sbjct: 900 VQL 902
>Z68132-2|CAA92220.2| 762|Caenorhabditis elegans Hypothetical
protein F09C8.2 protein.
Length = 762
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 88 VLKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLP 192
+L +D + +EVV N P +++ LSAF P
Sbjct: 359 LLTPNSDALLQKKLSEVVHNPPQRAIGLSAFPAFP 393
>AL117195-17|CAB60767.1| 534|Caenorhabditis elegans Hypothetical
protein Y57A10A.24 protein.
Length = 534
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/54 (20%), Positives = 24/54 (44%)
Frame = -1
Query: 168 DNAFPWIIFHYFGKHSGCEVIVSIFEYIREICDGCHCRDGDSKQTNDCLHVCGL 7
++ F WI + E + S ++Y++++C D++ C +C L
Sbjct: 13 NSQFLWIFLINLITSANSEALASPYQYLKDLCPVGQLPLTDTEHVKTCASLCPL 66
>AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical
protein Y106G6D.7 protein.
Length = 948
Score = 26.2 bits (55), Expect = 7.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 85 NVLKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPP 195
N+ +NG F A + V++NN G+ + A V PP
Sbjct: 370 NLGRNGPPPFQAGVPPPVIQNNMGRPIAPPAAMVRPP 406
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,413,236
Number of Sequences: 27780
Number of extensions: 156010
Number of successful extensions: 455
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 455
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 567749674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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