Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00246X
         (381 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   1.2  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   1.2  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   1.2  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              23   1.6  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    23   1.6  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    21   3.7  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -3

Query: 178 MPRGQRFSLDYFSLLR 131
           +PRG+ FSL Y  LLR
Sbjct: 91  LPRGELFSLYYPQLLR 106


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -3

Query: 178 MPRGQRFSLDYFSLLR 131
           +PRG+ FSL Y  LLR
Sbjct: 91  LPRGELFSLYYPQLLR 106


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = -2

Query: 278 YSIVVREAIAFKSSSLVSPSEAKAN*ARGGSTENAERTTLFP 153
           YS+      A  +++LV+P   +      GS E+ + T L P
Sbjct: 404 YSVARFAETALGAAALVAPGMEEPTNTASGSNEDEDETPLDP 445


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 205 LALASDGETNEELLKAMASLTTMLYDQISRLK 300
           +A  +D E N E L++   +T   YD+I RLK
Sbjct: 27  IAQVTDDE-NCETLQSEVHITKDEYDEIGRLK 57


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 205 LALASDGETNEELLKAMASLTTMLYDQISRLK 300
           +A  +D E N E L++   +T   YD+I RLK
Sbjct: 27  IAQVTDDE-NCETLQSEVHITKDEYDEIGRLK 57


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +1

Query: 151 PGKSVVLSAFSVLPPLAQLALASDGET 231
           P K +   AF   PPL + A+    +T
Sbjct: 406 PSKPMCAEAFQEFPPLGRFAVRDMRQT 432


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,567
Number of Sequences: 438
Number of extensions: 1986
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9300375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)