Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00245
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    30   0.023
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    27   0.21 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    26   0.37 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.0  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   4.6  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   6.0  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   8.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   8.0  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   8.0  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 29.9 bits (64), Expect = 0.023
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 512 GAFSDLKSMRFLDLSYNKISYIQPGVFK 595
           G  +  K + +LDLSYN++  I  G FK
Sbjct: 388 GQLARFKCLSWLDLSYNRLGQIDAGTFK 415



 Score = 27.9 bits (59), Expect = 0.092
 Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
 Frame = +1

Query: 1   IERLQYNAFAHTGDMDTLDVSYNMLIEFNLNNTQISS---LTKLLLNNNFIKTIS 156
           +  L  N F  TG ++ LDVS+N+L +  L +  ++S   L++L L+ N I ++S
Sbjct: 332 LRSLPDNLFRETG-LERLDVSHNLLGKLPLTSLSLASAQTLSELDLSWNSISSLS 385



 Score = 27.1 bits (57), Expect = 0.16
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +1

Query: 103 ISSLTKLLLNNNFIKTISDRTLLGLTSLKEIIVTHNKIE 219
           ++ L +L L+NN ++ + D +   L SLK++ +  N IE
Sbjct: 41  LNRLEELDLSNNRLRNVPDNSFHFLRSLKKVHLQDNTIE 79



 Score = 25.8 bits (54), Expect = 0.37
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +1

Query: 52  LDVSYNMLIEFNLNNTQISSLTKLLLNNNFIKTISDRTLLGLTSLKE 192
           L++ YN L    +    ++ L  L L  N I T+S+ +LLG  +  E
Sbjct: 495 LNLDYNDLSAVPIVTHSLTELRHLSLEGNPITTLSNTSLLGAANQLE 541



 Score = 25.4 bits (53), Expect = 0.49
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = +1

Query: 112 LTKLLLNNNFIKTISDRTLLGLTSLKEIIVTHNKI 216
           L ++ L++N I+++  R  + L SLK + +  NKI
Sbjct: 118 LEQIHLDDNRIESLERRAFMNLKSLKRLNLKGNKI 152



 Score = 24.6 bits (51), Expect = 0.85
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 503 IGVGAFSDLKSMRFLDLSYNKISYIQPGVF 592
           I    F +L  +  LDL+YN IS +   +F
Sbjct: 155 IAYETFQNLPELEDLDLAYNSISSLDFNIF 184



 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +2

Query: 515 AFSDLKSMRFLDLSYNKISYIQPGVFKD 598
           AF +LKS++ L+L  NKI+ I    F++
Sbjct: 135 AFMNLKSLKRLNLKGNKIATIAYETFQN 162



 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = +2

Query: 524 DLKSMRFLDLSYNKISYI 577
           ++ S+R+L+L YN +S +
Sbjct: 488 NISSLRYLNLDYNDLSAV 505



 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = +2

Query: 527 LKSMRFLDLSYNKISYIQPGVFK 595
           L++++ LDLS+N I+ +    F+
Sbjct: 222 LQNIKVLDLSFNNITSVAKQFFR 244


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 471 HLASLVRLNATSERLLFWNKKY 406
           HLAS++RL  T  ++ F N +Y
Sbjct: 72  HLASIIRLTPTQVKIWFQNHRY 93


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
 Frame = -1

Query: 570 EILL*LKSRNLID----FKSENAPTPI*LYYFCTISNHLASLVRL 448
           E++L LK+R +I      K E     + L   CT+ +HL+ L+RL
Sbjct: 823 ELVLMLKNRYIILNGRLIKMETKAQSVALGKICTLHHHLSKLIRL 867


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +3

Query: 378 LGNSSVAILDISCSKITNVQKLHLNELKRL 467
           L  ++   LD+S +K TN++K +LN  ++L
Sbjct: 302 LSKNNDQCLDLSKTKETNLEKSNLNHNEQL 331


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +3

Query: 378 LGNSSVAILDISCSKITNVQKLHLNELKRL 467
           L  ++   LD+S +K TN++K +LN  ++L
Sbjct: 194 LSKNNDQCLDLSKTKETNLEKSNLNHNEQL 223


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 678 YLSSLDVSYNDLDDLKGERFYQLQ 749
           Y +    SY  LDDL  + FY ++
Sbjct: 109 YSNVTTCSYYSLDDLSEDTFYDIR 132


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -2

Query: 167 KVLSDIVLIKLLFSNNFV 114
           K +SD++++KL   N++V
Sbjct: 236 KAMSDLMIVKLSHCNSYV 253


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/45 (24%), Positives = 22/45 (48%)
 Frame = +1

Query: 175 LTSLKEIIVTHNKIEHFSDNSLLDQMDSIFWTFRLMINWPLMRIL 309
           L +LK ++  HN I   S   L    +  FW+++  +++    I+
Sbjct: 97  LKNLK-MVQNHNNIREKSHYCLFVASNCFFWSYQSYMSYIFANIM 140


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/45 (24%), Positives = 22/45 (48%)
 Frame = +1

Query: 175 LTSLKEIIVTHNKIEHFSDNSLLDQMDSIFWTFRLMINWPLMRIL 309
           L +LK ++  HN I   S   L    +  FW+++  +++    I+
Sbjct: 97  LKNLK-MVQNHNNIREKSHYCLFVASNCFFWSYQSYMSYIFANIM 140


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +2

Query: 2   SKDCNTTLSLTLEIWIPLMYLTI 70
           +KD N+  SL L +WI + ++ +
Sbjct: 244 AKDHNSLYSLHLLLWITVTFILL 266


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,510
Number of Sequences: 336
Number of extensions: 3800
Number of successful extensions: 19
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)