Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00245
(750 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51747| Best HMM Match : LRR_1 (HMM E-Value=2.5e-16) 39 0.004
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.020
SB_42679| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-08) 36 0.046
SB_26267| Best HMM Match : TSP_C (HMM E-Value=0) 34 0.11
SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33) 34 0.11
SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_53214| Best HMM Match : LRR_1 (HMM E-Value=7.4e-06) 33 0.33
SB_22886| Best HMM Match : LRR_1 (HMM E-Value=2e-06) 31 1.00
SB_35110| Best HMM Match : LRR_1 (HMM E-Value=3.9e-09) 30 1.7
SB_56441| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_22441| Best HMM Match : LRR_1 (HMM E-Value=1.8e-19) 30 2.3
SB_30296| Best HMM Match : Met_synt_B12 (HMM E-Value=0) 29 3.0
SB_13884| Best HMM Match : LRR_1 (HMM E-Value=6.3e-06) 29 3.0
SB_13921| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_35937| Best HMM Match : LRR_1 (HMM E-Value=7.1e-09) 29 5.3
SB_4797| Best HMM Match : LRR_1 (HMM E-Value=6.7e-13) 29 5.3
SB_10386| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_50513| Best HMM Match : Lig_chan (HMM E-Value=0.0083) 28 9.3
SB_17671| Best HMM Match : 7tm_1 (HMM E-Value=0.00083) 28 9.3
>SB_51747| Best HMM Match : LRR_1 (HMM E-Value=2.5e-16)
Length = 288
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/62 (33%), Positives = 36/62 (58%)
Frame = +1
Query: 43 MDTLDVSYNMLIEFNLNNTQISSLTKLLLNNNFIKTISDRTLLGLTSLKEIIVTHNKIEH 222
+++LD+S+N +L SLT+L L++N I+ +S T L LK +I+ HN ++
Sbjct: 105 LESLDLSFNEFESLDLQEVDCPSLTQLDLSHNSIQFVS-ATPRDLRHLKSLILNHNNLQS 163
Query: 223 FS 228
S
Sbjct: 164 LS 165
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 36.7 bits (81), Expect = 0.020
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +1
Query: 10 LQYNAFAHTGDMDTLDVSYNMLIEFNLNNTQ-ISSLTKLLLNNNFIKTISDRTLLGLTSL 186
L + F + +LD+S N L + + +SSL L L+ N ++ I + T GL +L
Sbjct: 107 LPRSVFRDLASLRSLDLSANRLSSLPEDTFEGLSSLQDLFLDFNRLRAIPETTFHGLAAL 166
Query: 187 KEIIVTHNKIEHFSDNSL 240
+ + + +N ++ FS+ +L
Sbjct: 167 QRLRLHNNNLKTFSERTL 184
Score = 35.9 bits (79), Expect = 0.035
Identities = 16/36 (44%), Positives = 26/36 (72%)
Frame = +1
Query: 103 ISSLTKLLLNNNFIKTISDRTLLGLTSLKEIIVTHN 210
+++L +L L+NN +KT S+RTL G SLK + + +N
Sbjct: 163 LAALQRLRLHNNNLKTFSERTLQGTLSLKSLQLNNN 198
>SB_42679| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-08)
Length = 537
Score = 35.5 bits (78), Expect = 0.046
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +1
Query: 106 SSLTKLLLNNNFIKTISDRTLLGLTSLKEIIVTHNKIEHFSDNSL 240
++L L+L+NN I I + GLTSL+ + ++HN E + ++
Sbjct: 47 TNLVTLILSNNEIIAIDENAFQGLTSLRNLSLSHNDFESWDSTAI 91
>SB_26267| Best HMM Match : TSP_C (HMM E-Value=0)
Length = 2996
Score = 34.3 bits (75), Expect = 0.11
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Frame = +3
Query: 249 NGLNFLDISFND--KLAFNANIVKSSMYLNKLIISGLEPNISLIGLGNSSVAILDISCSK 422
+ + LD+S+N+ L +A SS Y L + L + LI L + ++ +LD+ ++
Sbjct: 592 SSIRILDLSYNEIRTLKEDAFAGLSSSYKVMLRNNKLIQS-PLIPLAHLNLVVLDLQFNQ 650
Query: 423 ITNVQKLHLNELKRLDDLKLYKNNIIKLESERFR 524
I + LN L DL L NNI +L + F+
Sbjct: 651 IPTINVGELNVFTGLRDLFLQNNNITELGKDLFK 684
Score = 30.7 bits (66), Expect = 1.3
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +1
Query: 40 DMDTLD-VSYNMLIEFNLNNTQISSLTKLLLNNNFIKTISDRTLLGLTSLKEIIVTHNKI 216
D + +D +SY L F N +Q L L L+NN I++I+ L LK + + HNK+
Sbjct: 141 DNNQIDRISYPNLEPFFQNRSQ---LVHLNLSNNAIESIASEAFSQLIHLKVLDLRHNKL 197
Query: 217 EHFSDNSLLDQMDSIFWTFRLMINWPLMRIL 309
+ + D + L + L ++L
Sbjct: 198 STITAQGGVTPFDQLPKLKTLYVRQELAKLL 228
>SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33)
Length = 1065
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 1 IERLQYNAFAHTGDMDTLDVSYNMLIEFNLNNTQISSLTKLL-LNNNFIKTISDRTLLGL 177
++++ F ++ LDVS+N + F+ + L ++L +NNN + T+ L +
Sbjct: 203 MKKITQGTFGSLMSLEFLDVSFNEIRHFDEESLACLPLLEVLHINNNSLTTVPLHALRKV 262
Query: 178 TSLKEIIVTHNKIEHFSDNS 237
LKE+ ++ N I + S +
Sbjct: 263 KFLKELDLSANLISYVSSTA 282
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +2
Query: 515 AFSDLKSMRFLDLSYNKISYIQPGVFKD 598
+F D + +++LDLS N IS IQ G F++
Sbjct: 88 SFQDYQYLKWLDLSNNDISDIQDGTFEN 115
>SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 740
Score = 32.7 bits (71), Expect = 0.33
Identities = 22/81 (27%), Positives = 40/81 (49%)
Frame = +1
Query: 19 NAFAHTGDMDTLDVSYNMLIEFNLNNTQISSLTKLLLNNNFIKTISDRTLLGLTSLKEII 198
N A DT+D S N + + + L +LLNNN + +++ L +L+ II
Sbjct: 526 NMGATLDQFDTIDFSDNDIRKIE-GFPLLKRLKTILLNNNRVCRVAEGLGECLPNLESII 584
Query: 199 VTHNKIEHFSDNSLLDQMDSI 261
+T+N ++ D L+ + S+
Sbjct: 585 LTNNAMQELKDLEPLESVKSL 605
>SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 825
Score = 32.7 bits (71), Expect = 0.33
Identities = 21/76 (27%), Positives = 34/76 (44%)
Frame = +1
Query: 19 NAFAHTGDMDTLDVSYNMLIEFNLNNTQISSLTKLLLNNNFIKTISDRTLLGLTSLKEII 198
+AF ++ L +S N + + L +L L N + I D T L +LK +
Sbjct: 103 SAFNRLSSLEVLKLSKNRISTIRGAFWGQNKLQQLNLERNRLSHIQDTTFKHLLALKVLN 162
Query: 199 VTHNKIEHFSDNSLLD 246
+ +N+I H S S D
Sbjct: 163 LANNRIYHISQGSFSD 178
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +2
Query: 503 IGVGAFSDLKSMRFLDLSYNKISY 574
I G+FSDL+S+ LDLS N IS+
Sbjct: 171 ISQGSFSDLRSLEGLDLSNNDISW 194
>SB_53214| Best HMM Match : LRR_1 (HMM E-Value=7.4e-06)
Length = 298
Score = 32.7 bits (71), Expect = 0.33
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +1
Query: 112 LTKLLLNNNFIKTISDRTLLGLTSLKEIIVTHNKIEHFSDN 234
LT L L+NNF+ +I L L SLK V N+I+ +D+
Sbjct: 147 LTILYLSNNFLDSIPGGCFLDLKSLKHFFVGDNQIKKVADD 187
>SB_22886| Best HMM Match : LRR_1 (HMM E-Value=2e-06)
Length = 583
Score = 31.1 bits (67), Expect = 1.00
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 10 LQYNAFAHTGDMDTLDVSYNMLIEFNLNNTQISSLTKLLLN 132
+ Y A + ++ +LDVS+NM +F+L I S L LN
Sbjct: 145 IDYAALGYFKNLTSLDVSHNMFSDFDLKQISIKSPNLLELN 185
>SB_35110| Best HMM Match : LRR_1 (HMM E-Value=3.9e-09)
Length = 546
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Frame = +1
Query: 37 GDMDTLDVSYNMLIEFNLNNTQI-SSLTKLLLNNNFIKTI------SDRTLLGLTSLKEI 195
G ++ LD+SYN L ++ + +L L L N I+ + + RT+ G+T+LK +
Sbjct: 85 GHLEKLDLSYNRLTGADILALGLMENLRTLHLTGNEIRRLPIEMARTYRTITGITALKYL 144
Query: 196 IVTHNKI 216
+ HN+I
Sbjct: 145 NLEHNEI 151
>SB_56441| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1717
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 518 FSDLKSMRFLDLSYNKISYIQPGVFK 595
FS L+ +++LDLS+NKI + FK
Sbjct: 1684 FSGLREIKYLDLSWNKILRVDKNAFK 1709
>SB_22441| Best HMM Match : LRR_1 (HMM E-Value=1.8e-19)
Length = 261
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +1
Query: 52 LDVSYNMLIEFNLNNTQISS---LTKLLLNNNFIKTISDRTLLGLTSLKEIIVTHNKIEH 222
L SYN + NL + + L L + NNF++ I + T L L E+ + +NK+E
Sbjct: 65 LRASYNRIT--NLTRSSFAGYPYLKWLSVENNFMEVIENGTFLRQALLDELYLGYNKLER 122
Query: 223 FSDNSL 240
+ +L
Sbjct: 123 ITRGTL 128
>SB_30296| Best HMM Match : Met_synt_B12 (HMM E-Value=0)
Length = 739
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -3
Query: 430 FVILEQEISRIATDEFPRPINDILG 356
+VI + E +R+ TD +PRP+N I G
Sbjct: 134 YVIEDTEEARVNTDRYPRPLNVIEG 158
>SB_13884| Best HMM Match : LRR_1 (HMM E-Value=6.3e-06)
Length = 575
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 106 SSLTKLLLNNNFIKTISDRTLLGLTSLKEIIVTHNKIEHFSDN 234
++L L L NN I I+ GL +L+ + + HN I + N
Sbjct: 128 TNLINLTLENNSISAIAPHAFKGLDNLQSLNLRHNNISLWEGN 170
>SB_13921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 688
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +1
Query: 49 TLDVSYNMLIEFNLNNTQISSLTKLLLNNNFIKTISDRTLLGLTSLKEIIVTHNKIEHFS 228
TLD++ LIE + L L L N++ T+ + L +LK + + +N I
Sbjct: 21 TLDLNRKNLIEIPPKVLDLQHLEFLYLEGNYLTTLPETLFERLPNLKWLDLRNNHINEVP 80
Query: 229 DN 234
+N
Sbjct: 81 EN 82
>SB_35937| Best HMM Match : LRR_1 (HMM E-Value=7.1e-09)
Length = 224
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 524 DLKSMRFLDLSYNKISYIQPGVFK 595
+LK + LDLSYN++S+I + K
Sbjct: 50 ELKDLELLDLSYNRLSFIPADIGK 73
>SB_4797| Best HMM Match : LRR_1 (HMM E-Value=6.7e-13)
Length = 335
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +3
Query: 402 LDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKLES 512
LD+S + I ++ L ++L +L DL LY N I K+E+
Sbjct: 92 LDLSFNNIEVIEGL--DKLTKLKDLTLYNNRITKIEN 126
>SB_10386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/72 (18%), Positives = 35/72 (48%)
Frame = +1
Query: 52 LDVSYNMLIEFNLNNTQISSLTKLLLNNNFIKTISDRTLLGLTSLKEIIVTHNKIEHFSD 231
+D YN + F++ +++S+T L+ + KT+ + +G +L + + + H+ +
Sbjct: 545 IDPEYNEMFLFHVPEQELNSVTVLIALTSVSKTLGRKLKVGQLALGQNYSSEEEYRHWFE 604
Query: 232 NSLLDQMDSIFW 267
+ + + W
Sbjct: 605 MTRSKEKSIVRW 616
>SB_50513| Best HMM Match : Lig_chan (HMM E-Value=0.0083)
Length = 417
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = -1
Query: 531 FKSENAPTPI*LYYFCTIS---NHLASLVRLNATSERLLFWNKKYLE*LQTSFRGQ 373
F+ +++ + +Y F I N+ ++ +E +FWN +Y +Q FRG+
Sbjct: 38 FQQDSSSCSLIVYIFVKIGHLVNNETRASKITMDTEEKIFWNGEYWGDIQCEFRGK 93
>SB_17671| Best HMM Match : 7tm_1 (HMM E-Value=0.00083)
Length = 585
Score = 27.9 bits (59), Expect = 9.3
Identities = 20/71 (28%), Positives = 39/71 (54%)
Frame = +1
Query: 46 DTLDVSYNMLIEFNLNNTQISSLTKLLLNNNFIKTISDRTLLGLTSLKEIIVTHNKIEHF 225
D +S N++I ++ +NT ISS T ++ ++N T + ++S II+ H+
Sbjct: 507 DNTTISSNIIIIYH-DNTIISSNTIIIYHDN--------TTISISSDNTIIIYHDNTTIS 557
Query: 226 SDNSLLDQMDS 258
SDN+++ D+
Sbjct: 558 SDNTIIIYHDN 568
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,414,371
Number of Sequences: 59808
Number of extensions: 410626
Number of successful extensions: 959
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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