Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00245
(750 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g06780.1 68414.m00721 glycosyl transferase family 8 protein c... 42 6e-04
At5g44700.1 68418.m05477 leucine-rich repeat transmembrane prote... 35 0.066
At3g28040.1 68416.m03500 leucine-rich repeat transmembrane prote... 34 0.088
At1g09760.1 68414.m01095 U2 small nuclear ribonucleoprotein A, p... 34 0.12
At3g56370.1 68416.m06269 leucine-rich repeat transmembrane prote... 32 0.35
At1g34420.1 68414.m04275 leucine-rich repeat family protein / pr... 31 0.62
At5g41740.1 68418.m05076 disease resistance protein (TIR-NBS-LRR... 30 1.4
At2g17440.1 68415.m02012 leucine-rich repeat family protein cont... 30 1.4
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 30 1.9
At5g25550.1 68418.m03040 leucine-rich repeat family protein / ex... 29 2.5
At4g26050.1 68417.m03750 leucine-rich repeat family protein cont... 29 2.5
At3g23570.1 68416.m02965 dienelactone hydrolase family protein s... 29 2.5
At2g33080.1 68415.m04056 leucine-rich repeat family protein cont... 29 2.5
At1g73070.1 68414.m08449 leucine-rich repeat family protein cont... 29 2.5
At1g66150.1 68414.m07508 leucine-rich repeat protein kinase, put... 29 2.5
At1g47890.1 68414.m05333 disease resistance family protein conta... 29 2.5
At4g20140.1 68417.m02947 leucine-rich repeat transmembrane prote... 29 3.3
At1g69545.1 68414.m07997 leucine-rich repeat family protein cont... 29 3.3
At1g65850.1 68414.m07472 disease resistance protein (TIR-NBS-LRR... 29 3.3
At1g08590.1 68414.m00952 CLAVATA1 receptor kinase (CLV1) similar... 29 3.3
At5g48940.1 68418.m06054 leucine-rich repeat transmembrane prote... 29 4.4
At5g44510.1 68418.m05453 disease resistance protein (TIR-NBS-LRR... 29 4.4
At4g28650.1 68417.m04095 leucine-rich repeat transmembrane prote... 29 4.4
At4g03260.1 68417.m00445 leucine-rich repeat family protein cont... 29 4.4
At3g53240.1 68416.m05868 leucine-rich repeat family protein cont... 29 4.4
At3g25510.1 68416.m03172 disease resistance protein (TIR-NBS-LRR... 29 4.4
At1g78230.1 68414.m09116 leucine-rich repeat family protein 29 4.4
At1g12290.1 68414.m01421 disease resistance protein (CC-NBS-LRR ... 29 4.4
At5g65700.1 68418.m08269 leucine-rich repeat transmembrane prote... 28 5.8
At5g56040.1 68418.m06992 leucine-rich repeat protein kinase, put... 28 5.8
At5g05850.1 68418.m00643 leucine-rich repeat family protein cont... 28 5.8
At3g15410.1 68416.m01955 leucine-rich repeat family protein cont... 28 5.8
At2g24230.1 68415.m02894 leucine-rich repeat transmembrane prote... 28 5.8
At1g74180.1 68414.m08591 leucine-rich repeat family protein cont... 28 5.8
At1g11130.1 68414.m01274 leucine-rich repeat family protein / pr... 28 5.8
At1g05310.1 68414.m00538 pectinesterase family protein contains ... 28 5.8
At5g20690.1 68418.m02457 leucine-rich repeat transmembrane prote... 28 7.6
At3g13380.1 68416.m01683 leucine-rich repeat family protein / pr... 28 7.6
At2g15080.2 68415.m01719 disease resistance family protein conta... 28 7.6
At2g15080.1 68415.m01718 disease resistance family protein conta... 28 7.6
At1g34110.1 68414.m04230 leucine-rich repeat transmembrane prote... 28 7.6
>At1g06780.1 68414.m00721 glycosyl transferase family 8 protein
contains Pfam profile: PF01501 glycosyl transferase
family 8
Length = 589
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/77 (28%), Positives = 39/77 (50%)
Frame = +3
Query: 246 PNGLNFLDISFNDKLAFNANIVKSSMYLNKLIISGLEPNISLIGLGNSSVAILDISCSKI 425
PN N+ D +FN + F+ N++ SS+ +N I S EP + + S+ IS +
Sbjct: 289 PNQQNYFDANFNHYVVFSDNVLASSVVVNSTISSSKEPERIVFHVVTDSLNYPAISMWFL 348
Query: 426 TNVQKLHLNELKRLDDL 476
N+Q ++ +DD+
Sbjct: 349 LNIQSKATIQILNIDDM 365
>At5g44700.1 68418.m05477 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1252
Score = 34.7 bits (76), Expect = 0.066
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +1
Query: 52 LDVSYNMLI-EFNLNNTQISSLTKLLLNNNFIKTISDRTLLGLTSLKEIIVTHNKIE 219
LD+S N L + + Q+ LT L LNNN ++ ++ LT+L+E + HN +E
Sbjct: 366 LDLSNNTLTGQIPDSLFQLVELTNLYLNNNSLEGTLSSSISNLTNLQEFTLYHNNLE 422
>At3g28040.1 68416.m03500 leucine-rich repeat transmembrane protein
kinase, putative contains Pfam profiles: PF00560 leucine
rich repeat, PF00069 eukaryotic protein kinase domain
Length = 1016
Score = 34.3 bits (75), Expect = 0.088
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +1
Query: 19 NAFAHTGDMDTLDVSYNMLI-EFNLNNTQISSLTKL-LLNNNFIKTISDRTLLGLTSLKE 192
NA ++ + LD+S+N L + + I+SL L L N+F T+SD +SL+
Sbjct: 118 NALSNNNHLQKLDLSHNNLSGQIPSSLGSITSLQHLDLTGNSFSGTLSDDLFNNCSSLRY 177
Query: 193 IIVTHNKIE 219
+ ++HN +E
Sbjct: 178 LSLSHNHLE 186
>At1g09760.1 68414.m01095 U2 small nuclear ribonucleoprotein A,
putative identical to U2 small nuclear ribonucleoprotein
A' (U2 snRNP-A') [Arabidopsis thaliana]
SWISS-PROT:P43333; supported by
cDNA:gi_16649064_gb_AY059902.1_
Length = 249
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +1
Query: 19 NAFAHTGDMDTLDVSYNMLIEFNLNNTQISSLTKLLLNNNFIKTISDRTLLGLTSLKEII 198
N A DT+D+S N +++ N ++ L LL+NNN I I+ L L ++
Sbjct: 36 NLGATEDQFDTIDLSDNEIVKLE-NFPYLNRLGTLLINNNRITRINPNLGEFLPKLHSLV 94
Query: 199 VTHNKI 216
+T+N++
Sbjct: 95 LTNNRL 100
>At3g56370.1 68416.m06269 leucine-rich repeat transmembrane protein
kinase, putative leucine-rich receptor-like protein
kinase - Malus domestica, EMBL:AF053127
Length = 964
Score = 32.3 bits (70), Expect = 0.35
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 43 MDTLDVSYNMLIEFNLNNTQIS-SLTKLLLNNNFIKTISDRTLLGLTSLKEIIVTHNKI 216
+ LDVS+N L T + SL +L L NN ++ ++ +SL+ +I++HNK+
Sbjct: 426 LSVLDVSHNQLNGMIPRETGGAVSLEELRLENNLLEGNIPSSIKNCSSLRSLILSHNKL 484
>At1g34420.1 68414.m04275 leucine-rich repeat family protein /
protein kinase family protein contains leucine rich
repeat (LRR) domains, Pfam:PF00560; contains protein
kinase domain, Pfam:PF00069
Length = 966
Score = 31.5 bits (68), Expect = 0.62
Identities = 14/37 (37%), Positives = 25/37 (67%)
Frame = +3
Query: 387 SSVAILDISCSKITNVQKLHLNELKRLDDLKLYKNNI 497
S++ IL+ISC+ ++ L++LKRL ++ L NN+
Sbjct: 440 SNLLILNISCNSLSGSIPPSLSQLKRLSNMNLQGNNL 476
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/77 (23%), Positives = 36/77 (46%)
Frame = +1
Query: 43 MDTLDVSYNMLIEFNLNNTQISSLTKLLLNNNFIKTISDRTLLGLTSLKEIIVTHNKIEH 222
+D D N I +L N +S L LLL+NN++ + +L + +L+ N+
Sbjct: 232 IDLSDNQLNGSIPSSLGN--LSKLESLLLSNNYLSGLIPESLSSIQTLRRFAANRNRFTG 289
Query: 223 FSDNSLLDQMDSIFWTF 273
+ L ++++ +F
Sbjct: 290 EIPSGLTKHLENLDLSF 306
>At5g41740.1 68418.m05076 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1046
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Frame = +3
Query: 333 KLIISGLEP--NISLIGLGNSSVAILDI-SCSKITNVQKLHLNELKRLDDLKLYKNNIIK 503
+L+ G+EP N+ +I L N S + +I + SK TN+++L L L +L +N+ K
Sbjct: 602 ELLWGGIEPLPNLKIINL-NRSYRLKEIPNLSKATNLERLTLESCLSLVELPSSISNLHK 660
Query: 504 LE 509
LE
Sbjct: 661 LE 662
>At2g17440.1 68415.m02012 leucine-rich repeat family protein
contains Pfam PF00560: Leucine Rich Repeats
Length = 526
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 40 DMDTLDVSYNMLIEFNLNNTQISSLTKLLLNNNFIKTISDRTLLG-LTSLKEIIVTHNKI 216
++ LDVS+N L + +L KL + NNF S L+G L L+E+ +++N+I
Sbjct: 392 NLKELDVSFNELESVPESLCYAKTLVKLNIGNNFANLRSLPGLIGNLEKLEELDMSNNQI 451
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Frame = +1
Query: 37 GDMDTLDVSYNMLIEFNLNNTQISSLTKLLL----NNNFIKTISDRTLLGLTSLKEIIVT 204
G M L + N L + ++ I+SL +L+L +NN T+ + LTSL+++ VT
Sbjct: 699 GSMQKLFLQGNGLSDESIQWEGIASLKRLMLLSISHNNL--TVLPSAMGSLTSLRQLDVT 756
Query: 205 HNKIEHF-SDNSLLDQMD 255
+NK+ ++ LL Q++
Sbjct: 757 NNKLTSLPNELGLLTQLE 774
>At5g25550.1 68418.m03040 leucine-rich repeat family protein /
extensin family protein similar to leucine-rich
repeat/extensin 1 (GI:13809918) [Arabidopsis thaliana];
contains Pfam PF00560: Leucine Rich Repeat domains
Length = 433
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +1
Query: 97 TQISSLTKLLLNNNFIKTISDRTLLGLTSLKEIIVTHNKIEHFSDNSLLDQ-MDSIF 264
+Q+S L +L L+NN ++GL LK + + +N+ E SL D+ +D++F
Sbjct: 144 SQLSLLFELDLSNNRFAGKFPEVVIGLPKLKYLDLRYNEFEGELPESLFDKDLDALF 200
>At4g26050.1 68417.m03750 leucine-rich repeat family protein
contains Pfam PF00560: Leucine Rich Repeat domains;
Length = 383
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/60 (25%), Positives = 36/60 (60%)
Frame = +1
Query: 40 DMDTLDVSYNMLIEFNLNNTQISSLTKLLLNNNFIKTISDRTLLGLTSLKEIIVTHNKIE 219
++ TLD+S L + ++ ++S++KL L+NN I+ I + + + +L + + N+++
Sbjct: 58 NIKTLDLSGMSLASLSASSINLASISKLDLSNNNIQKIPESLVARMLNLWALDLQSNQLK 117
>At3g23570.1 68416.m02965 dienelactone hydrolase family protein
similar to SP|Q9ZT66 Endo-1,3;1,4-beta-D-glucanase
precursor (EC 3.2.1.-) {Zea mays}; contains Pfam
profile: PF01738 dienelactone hydrolase family
Length = 239
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 424 ILEQEISRIATDEFPRPINDILGSKPEIISLFK 326
+L EI +++ E R DIL SKP++ S K
Sbjct: 167 VLGAEIDQVSPPELVRQFEDILASKPQVKSFVK 199
>At2g33080.1 68415.m04056 leucine-rich repeat family protein
contains leucine rich-repeat domain Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Cf-2.2
[Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780
Length = 740
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Frame = +1
Query: 37 GD-MDTLDVSYNMLIEFNLNNTQI--SSLTKLLLNNNFIKTISDRTLLGLTSLKEIIVTH 207
GD + TLD+ +N LI L + + SSL L ++NN IK L L +L+ +I++
Sbjct: 453 GDSLQTLDIGFN-LISGTLPRSLLNCSSLEFLSVDNNRIKDTFPFWLKALPNLQVLILSS 511
Query: 208 NKI 216
NK+
Sbjct: 512 NKL 514
>At1g73070.1 68414.m08449 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to receptor-like
protein kinase INRPK1 [Ipomoea nil]
gi|14495542|gb|AAB36558
Length = 598
Score = 29.5 bits (63), Expect = 2.5
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Frame = +3
Query: 237 SVRPNGLNFLDISFNDKLAFNANIVKSSMYLNKLI--ISGLEPNISLIGLGN-SSVAILD 407
S + LNF + +L +KS L+ SG+ P+ LGN SS+ +D
Sbjct: 72 SKKVTSLNFTGSGVSGQLGPEIGQLKSLEILDMSSNNFSGIIPS----SLGNCSSLVYID 127
Query: 408 ISCSKITNVQKLHLNELKRLDDLKLYKNNII-KLESERFRI 527
+S + + L LK L DL LY N++ +L FRI
Sbjct: 128 LSENSFSGKVPDTLGSLKSLADLYLYSNSLTGELPKSLFRI 168
>At1g66150.1 68414.m07508 leucine-rich repeat protein kinase,
putative (TMK1) identical to protein kinase TMK1
gi|166888|gb|AAA32876, SP|P43298 Putative receptor
protein kinase TMK1 precursor (EC 2.7.1.-) {Arabidopsis
thaliana}
Length = 942
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/57 (26%), Positives = 33/57 (57%)
Frame = +1
Query: 40 DMDTLDVSYNMLIEFNLNNTQISSLTKLLLNNNFIKTISDRTLLGLTSLKEIIVTHN 210
+++ L++ +N + + + ++SL L+L+NN +I GLTSL+ + + +N
Sbjct: 89 ELERLELQWNNISGPVPSLSGLASLQVLMLSNNNFDSIPSDVFQGLTSLQSVEIDNN 145
>At1g47890.1 68414.m05333 disease resistance family protein contains
leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon
pimpinellifolium] gi|1184077|gb|AAC15780
Length = 1019
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +1
Query: 43 MDTLDVSYNML---IEFNLNNTQISSLTKLLLNNNFIKTISDRTLLGLTSLKEIIVTHNK 213
++ LD+S N L + + L T +SSL+ L L NN + + T L+ + V+HN+
Sbjct: 637 LEILDLSNNNLNGSLPWCLE-TLMSSLSDLDLRNNSLSGSLPEIFMNATKLRSLDVSHNR 695
Query: 214 IE 219
+E
Sbjct: 696 ME 697
>At4g20140.1 68417.m02947 leucine-rich repeat transmembrane protein
kinase, putative Cf-2.2, Lycopersicon pimpinellifolium,
PIR:T10515
Length = 1249
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = +1
Query: 100 QISSLTKLLLNNNFIKTISDRTLLGLTSLKEIIVTHNKIE 219
++ LT L L+NN ++ ++ LT+L+ +++ HN +E
Sbjct: 382 ELVELTDLYLHNNTLEGTLSPSISNLTNLQWLVLYHNNLE 421
>At1g69545.1 68414.m07997 leucine-rich repeat family protein
contains Pfam PF00560: Leucine Rich Repeat domains;
similar to disease resistance protein RPP1-WsA
(GI:3860163)[Arabidopsis thaliana]
Length = 703
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 381 GNSSVAILDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKLES 512
G SS+ L +S + N+Q+L+L+E L +L N+I L++
Sbjct: 196 GCSSLVELPLSIGNLINLQELYLSECSSLVELPSSIGNLINLKT 239
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 381 GNSSVAILDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKLE 509
G SS+ L +S + N+Q+L+L+E L +L N+I L+
Sbjct: 435 GCSSLVELPLSIGNLINLQELYLSECSSLVELPSSIGNLINLQ 477
>At1g65850.1 68414.m07472 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1036
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +3
Query: 387 SSVAILDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKLE 509
SS+ L S K TN+QKL+LN L +L N+ KL+
Sbjct: 690 SSLVELPSSIGKATNLQKLYLNMCTSLVELPSSIGNLHKLQ 730
>At1g08590.1 68414.m00952 CLAVATA1 receptor kinase (CLV1) similar to
receptor-like protein kinase (Ipomoea nil) (U77888)
Length = 1029
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 381 GNSSVAILDISCSKITNVQKLHLNELKRLDDLKLYKNNI 497
G +S+ LD+S ++IT + + ELK L L L +N +
Sbjct: 291 GMTSLVFLDLSDNQITGEIPMEVGELKNLQLLNLMRNQL 329
>At5g48940.1 68418.m06054 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1135
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 40 DMDTLDVSYNMLI-EFNLNNTQISSLTKLLLNNNFIKTISDRTLLGLTSLKEIIVTHNKI 216
++ LD+S N L Q+ +LTKLLL +N I + + TSL + + +N+I
Sbjct: 420 NLQALDLSQNYLTGSLPAGLFQLRNLTKLLLISNAISGVIPLEIGNCTSLVRLRLVNNRI 479
>At5g44510.1 68418.m05453 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1187
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 381 GNSSVAILDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKLES 512
G S++ L S ITN+Q L+LN L +L N I L+S
Sbjct: 880 GCSNLLELPSSIWNITNLQSLYLNGCSSLKELPSLVENAINLQS 923
>At4g28650.1 68417.m04095 leucine-rich repeat transmembrane protein
kinase, putative receptor-like protein kinase 5,
Arabidopsis thaliana, PIR1:S27756
Length = 1013
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 381 GN-SSVAILDISCSKITNVQKLHLNELKRLDDLKLYKNN 494
GN +S+ LD++ K++ L +LK L+ L LY+NN
Sbjct: 233 GNINSLKYLDLAIGKLSGEIPSELGKLKSLETLLLYENN 271
>At4g03260.1 68417.m00445 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 677
Score = 28.7 bits (61), Expect = 4.4
Identities = 21/67 (31%), Positives = 29/67 (43%)
Frame = +1
Query: 52 LDVSYNMLIEFNLNNTQISSLTKLLLNNNFIKTISDRTLLGLTSLKEIIVTHNKIEHFSD 231
LD+SYN ++ SSL +L L N I I GL L ++ V + FS
Sbjct: 468 LDLSYNRILRLGHGLASCSSLKELYLAGNKISEIE-----GLHRLLKLTVLDLRFNKFST 522
Query: 232 NSLLDQM 252
L Q+
Sbjct: 523 TKCLGQL 529
>At3g53240.1 68416.m05868 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Cf-2.1
[Lycopersicon pimpinellifolium] gi|1184075|gb|AAC15779
Length = 891
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = +2
Query: 512 GAFSDLKSMRFLDLSYNKI 568
G+FS+L+S+ LDLS+NK+
Sbjct: 744 GSFSNLRSIESLDLSFNKL 762
>At3g25510.1 68416.m03172 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1981
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +3
Query: 366 SLIGLGNSSVAILDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKLES 512
+LI G SS+ L S N+QKLHL L +L N+ KL++
Sbjct: 1894 TLILCGCSSLVELPYSIGSANNLQKLHLCRCTSLVELPASIGNLHKLQN 1942
>At1g78230.1 68414.m09116 leucine-rich repeat family protein
Length = 676
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 524 DLKSMRFLDLSYNKISYIQPGV 589
DL +R LDLSYN+IS I G+
Sbjct: 488 DLTRLRVLDLSYNRISRIGQGL 509
>At1g12290.1 68414.m01421 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 884
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 521 SDLKSMRFLDLSYNKISYIQPGVFK 595
S+L S+R+LDLSY+ I + G+ K
Sbjct: 586 SELVSLRYLDLSYSSIGRLPVGLLK 610
>At5g65700.1 68418.m08269 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1003
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 512 GAFSDLKSMRFLDLSYNKISYIQPG 586
G+ S ++S+ LD SYN +S + PG
Sbjct: 569 GSISSMQSLTSLDFSYNNLSGLVPG 593
>At5g56040.1 68418.m06992 leucine-rich repeat protein kinase,
putative contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 953
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 40 DMDTLDVSYNMLIEFNLNNT-QISSLTKLLLNNNFIKTISDRTLLGLTSLKEIIVTHNKI 216
++ +D+SYN L N +I +LTKLLL +N++ + T+L + + N++
Sbjct: 410 ELQAIDLSYNNLSGSIPNGIFEIRNLTKLLLLSNYLSGFIPPDIGNCTNLYRLRLNGNRL 469
>At5g05850.1 68418.m00643 leucine-rich repeat family protein
contains Pfam PF00560: Leucine Rich Repeat domains;
similar to (SP:Q9UQ13) Leucine-rich repeat protein
SHOC-2 (Ras-binding protein Sur-8) (SP:Q9UQ13) {Homo
sapiens}
Length = 506
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 19 NAFAHTGDMDTLDVSYNMLIEFNLN-NTQISSLTKLLLNNNFIKTI 153
++ H G + LD SYN L N ++ L KLL++ N I+++
Sbjct: 290 DSICHCGSLVVLDASYNNLTYLPTNIGFELVKLEKLLIHLNKIRSL 335
>At3g15410.1 68416.m01955 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Hcr2-5D
[Lycopersicon esculentum] gi|3894393|gb|AAC78596;
identical to leucine-rich repeat protein [Arabidopsis
thaliana] gi|2760084|emb|CAA76000
Length = 584
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +1
Query: 43 MDTLDVSYNMLIEFNLNNTQISSLTKLLLNNNFIKTISDRTLLGLTSLKEIIVTHNKIEH 222
M +LDVS+N + E SL KL ++N +K + D ++ L ++ T+N+I
Sbjct: 93 MKSLDVSFNSISELPEQIGSAISLVKLDCSSNRLKELPD-SIGRCLDLSDLKATNNQISS 151
Query: 223 FSDN 234
++
Sbjct: 152 LPED 155
>At2g24230.1 68415.m02894 leucine-rich repeat transmembrane protein
kinase, putative
Length = 853
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 518 FSDLKSMRFLDLSYNKISYIQPGVFKD 598
F+D+KS+ FL++S N+ GVFK+
Sbjct: 231 FADMKSISFLNISGNQFDGSVTGVFKE 257
>At1g74180.1 68414.m08591 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Hcr2-0B [Lycopersicon
esculentum] gi|3894387|gb|AAC78593
Length = 951
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/44 (36%), Positives = 29/44 (65%)
Frame = +1
Query: 25 FAHTGDMDTLDVSYNMLIEFNLNNTQISSLTKLLLNNNFIKTIS 156
F+ D+++LD+SYNML + N+ + Q+++LT L + N +S
Sbjct: 802 FSKLKDIESLDLSYNML-QGNIPH-QLTNLTSLAVFNVSFNNLS 843
>At1g11130.1 68414.m01274 leucine-rich repeat family protein /
protein kinase family protein contains leucine
rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to leucine-rich
repeat transmembrane protein kinase 2 [Zea mays]
gi|3360291|gb|AAC27895
Length = 768
Score = 28.3 bits (60), Expect = 5.8
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +1
Query: 40 DMDTLDVSYNMLI-EFNLNNTQISSLTKLLLNNNFIKTISDRTLLGLTSLKEIIVTHNKI 216
D+ L + N+L E Q+S LTKL L++N ++ ++ L SLK + + NK+
Sbjct: 140 DLSELSLGSNLLSGEIPDYFQQLSKLTKLDLSSNILEGHLPSSMGDLASLKILYLQDNKL 199
Query: 217 EHFSDNSLLDQMDSIFWT 270
LD ++ +F T
Sbjct: 200 -----TGTLDVIEDLFLT 212
>At1g05310.1 68414.m00538 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 393
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 309 VKSSMYLNKLIISGLEPNISLIGLGNSSVAI 401
+ S MY K++I +PNI+L G G AI
Sbjct: 123 INSGMYYEKVVIPKTKPNITLQGQGFDITAI 153
>At5g20690.1 68418.m02457 leucine-rich repeat transmembrane protein
kinase, putative receptor-like protein kinase PRK1,
tomato, PIR:T07865
Length = 659
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +1
Query: 121 LLLNNNFIKTISDRTLLGLTSLKEIIVTHNKIEHFSDNSL--LDQMDSI 261
+L NN+F I D ++ LK + + HNK E +S+ L Q++ +
Sbjct: 125 MLSNNSFSGEIRDDFFKDMSKLKRLFLDHNKFEGSIPSSITQLPQLEEL 173
>At3g13380.1 68416.m01683 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 1164
Score = 27.9 bits (59), Expect = 7.6
Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Frame = +3
Query: 249 NGLNFLDISFND---KLAFNANIVKSSMYLNKLIISGLEPNISL-IGLGN-SSVAILDIS 413
+ L LD+S N+ ++ ++SS L KL+I+ + ++ + LG S+ +D+S
Sbjct: 375 SNLRVLDLSSNEFTGEVPSGFCSLQSSSVLEKLLIANNYLSGTVPVELGKCKSLKTIDLS 434
Query: 414 CSKITNVQKLHLNELKRLDDLKLYKNNI 497
+ +T + + L +L DL ++ NN+
Sbjct: 435 FNALTGLIPKEIWTLPKLSDLVMWANNL 462
>At2g15080.2 68415.m01719 disease resistance family protein contains
leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon
pimpinellifolium] gi|1184077|gb|AAC15780
Length = 983
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 91 NNTQISSLTKLLLNNNFIKTISDRTLLGLTSLKEIIVTHNKIEHFSDNSLLDQMDSI 261
N + S+LT L L NN + R++ L +LKE+ +++ + D ++ + SI
Sbjct: 396 NISSYSNLTVLRLGNNNFRGPIHRSISKLVNLKELDLSNYNTQGLVDFTIFSHLKSI 452
>At2g15080.1 68415.m01718 disease resistance family protein contains
leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon
pimpinellifolium] gi|1184077|gb|AAC15780
Length = 983
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 91 NNTQISSLTKLLLNNNFIKTISDRTLLGLTSLKEIIVTHNKIEHFSDNSLLDQMDSI 261
N + S+LT L L NN + R++ L +LKE+ +++ + D ++ + SI
Sbjct: 396 NISSYSNLTVLRLGNNNFRGPIHRSISKLVNLKELDLSNYNTQGLVDFTIFSHLKSI 452
>At1g34110.1 68414.m04230 leucine-rich repeat transmembrane protein
kinase, putative contains similarity to receptor protein
kinase-like protein GI:10177178 from [Arabidopsis
thaliana]
Length = 1045
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 40 DMDTLDVSYNMLI-EFNLNNTQISSLTKLLLNNNFIKTISDRTLLGLTSLKEIIVTHNKI 216
+++ LD+S N L+ +S L KL+LNNN + +++ L L + +++N +
Sbjct: 506 NLEQLDLSRNSFTGNIPLSFGNLSYLNKLILNNNLLTGQIPKSIKNLQKLTLLDLSYNSL 565
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,207,494
Number of Sequences: 28952
Number of extensions: 297602
Number of successful extensions: 1261
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1261
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1663169840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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