Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00243
(658 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 25 0.41
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 24 0.96
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 24 0.96
AF017414-2|AAB70261.1| 150|Tribolium castaneum abdominal-A prot... 24 0.96
AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII pr... 24 0.96
AJ850291-1|CAH64511.1| 533|Tribolium castaneum putative esteras... 23 2.9
AJ850290-1|CAH64510.1| 533|Tribolium castaneum putative esteras... 23 2.9
AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esteras... 23 2.9
AJ850288-1|CAH64508.1| 510|Tribolium castaneum putative esteras... 23 2.9
AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esteras... 23 2.9
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 22 5.1
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 22 5.1
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 21 6.7
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 25.4 bits (53), Expect = 0.41
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -3
Query: 470 LDARVQRAPVLAERHREQVLLLRGVTQQERALWF 369
L+ R QR LA R ++ G+TQ + +WF
Sbjct: 136 LNRRFQRTQYLALPERAELAASLGLTQTQVKIWF 169
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 24.2 bits (50), Expect = 0.96
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 324 SSTSRPLSPGGQLVPNSAR 268
+S S+P +PGGQ +P+ R
Sbjct: 114 NSCSQPAAPGGQPIPDIPR 132
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 24.2 bits (50), Expect = 0.96
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 324 SSTSRPLSPGGQLVPNSAR 268
+S S+P +PGGQ +P+ R
Sbjct: 173 NSCSQPAAPGGQPIPDIPR 191
>AF017414-2|AAB70261.1| 150|Tribolium castaneum abdominal-A
protein.
Length = 150
Score = 24.2 bits (50), Expect = 0.96
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 324 SSTSRPLSPGGQLVPNSAR 268
+S S+P +PGGQ +P+ R
Sbjct: 114 NSCSQPAAPGGQPIPDIPR 132
>AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII
protein.
Length = 209
Score = 24.2 bits (50), Expect = 0.96
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 324 SSTSRPLSPGGQLVPNSAR 268
+S S+P +PGGQ +P+ R
Sbjct: 173 NSCSQPAAPGGQPIPDIPR 191
>AJ850291-1|CAH64511.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 22.6 bits (46), Expect = 2.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 357 LLENKPEGTFLLRD 398
++E KPEG FL D
Sbjct: 283 VIEKKPEGAFLCED 296
>AJ850290-1|CAH64510.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 22.6 bits (46), Expect = 2.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 357 LLENKPEGTFLLRD 398
++E KPEG FL D
Sbjct: 283 VIEKKPEGAFLCED 296
>AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 22.6 bits (46), Expect = 2.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 357 LLENKPEGTFLLRD 398
++E KPEG FL D
Sbjct: 283 VIEKKPEGAFLCED 296
>AJ850288-1|CAH64508.1| 510|Tribolium castaneum putative esterase
protein.
Length = 510
Score = 22.6 bits (46), Expect = 2.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 357 LLENKPEGTFLLRD 398
++E KPEG FL D
Sbjct: 283 VIEKKPEGAFLCED 296
>AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esterase
protein.
Length = 509
Score = 22.6 bits (46), Expect = 2.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 357 LLENKPEGTFLLRD 398
++E KPEG FL D
Sbjct: 282 VIEKKPEGAFLCED 295
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 21.8 bits (44), Expect = 5.1
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -3
Query: 440 LAERHREQVLLLRGVTQQERALWF 369
L ER R+Q+ G+ + + +WF
Sbjct: 253 LTERRRQQLSAELGLNEAQIKIWF 276
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 21.8 bits (44), Expect = 5.1
Identities = 11/40 (27%), Positives = 15/40 (37%)
Frame = +3
Query: 204 PLTLLFLKFDRDSSHLRCLRRLVPNSAPADLQEITACSYY 323
PL+L + H L+ P +P D AC Y
Sbjct: 40 PLSLGMSPYASSQHHHHHLQARPPQDSPYDASVAAACKLY 79
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 21.4 bits (43), Expect = 6.7
Identities = 9/40 (22%), Positives = 22/40 (55%)
Frame = -3
Query: 236 SIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKML 117
++K +E++ ++ + + D+I+V+P+ D K L
Sbjct: 265 AVKRKEKKAQKEKDKPNSTTNGSPDVIKVEPELSDSEKTL 304
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,121
Number of Sequences: 336
Number of extensions: 2556
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -