Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00243
(658 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 27 0.12
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 24 1.5
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 23 1.9
M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee homeobox-... 23 2.6
DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein ... 23 3.4
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 23 3.4
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 23 3.4
AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein ... 23 3.4
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 23 3.4
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 4.5
AB248729-1|BAF02606.1| 43|Apis mellifera distal-less protein. 22 4.5
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 27.5 bits (58), Expect = 0.12
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 276 NSAPADLQEITACSYYWGKMDRYEAERLLENKP 374
NSA D+ ++ Y+ K D+YE +L P
Sbjct: 69 NSAKRDINDVLNVLYFINKNDKYEENTILTTMP 101
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 23.8 bits (49), Expect = 1.5
Identities = 16/66 (24%), Positives = 33/66 (50%)
Frame = +3
Query: 258 LRRLVPNSAPADLQEITACSYYWGKMDRYEAERLLENKPEGTFLLRDSAQEEHLFSVSFR 437
L+R++P++ D ++ C+ ++ + + L+ENKPE L + + F V F
Sbjct: 64 LKRVLPDALATDCKK---CTDKQREVIKKVIKFLVENKPELWDSLANKYDPDKKFRVKFE 120
Query: 438 KYGRSL 455
+ + L
Sbjct: 121 EEAKKL 126
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 23.4 bits (48), Expect = 1.9
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -2
Query: 99 WPATNTASYPGWLWWQA 49
W ++ S+P +WW+A
Sbjct: 171 WICSSAISFPAIVWWRA 187
>M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E30. ).
Length = 109
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3
Query: 440 LAERHREQVLLLRGVTQQERALWF 369
L ER R+Q+ G+T+ + +WF
Sbjct: 45 LTERRRQQLSRDLGLTEAQIKIWF 68
>DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein 4
protein.
Length = 128
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -1
Query: 472 CSMRACSERPYLRNDTENRCSSCAESRSR 386
C+ A + L + EN CS C+E + +
Sbjct: 56 CTPDAAELKRNLPDALENECSPCSEKQKK 84
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 22.6 bits (46), Expect = 3.4
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +3
Query: 315 SYYWGKMDRYEAERLLENKPEGTFLLRDSAQEEHLFSVSFRKYGR 449
+YY GK++R E +R+ K L + + + + V +YG+
Sbjct: 551 NYYSGKLERTEEQRIALRKYHAPRLAKLALESTSMIDVV--RYGK 593
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 22.6 bits (46), Expect = 3.4
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +3
Query: 315 SYYWGKMDRYEAERLLENKPEGTFLLRDSAQEEHLFSVSFRKYGR 449
+YY GK++R E +R+ K L + + + + V +YG+
Sbjct: 589 NYYSGKLERTEEQRIALRKYHAPRLAKLALESTSMIDVV--RYGK 631
>AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein
protein.
Length = 128
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -1
Query: 472 CSMRACSERPYLRNDTENRCSSCAESRSR 386
C+ A + L + EN CS C+E + +
Sbjct: 56 CTPDAAELKRNLPDALENECSPCSEKQKK 84
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 22.6 bits (46), Expect = 3.4
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 85 VSCRPLILLKSSIFNISLVSGSTSMMSCSRADTSGT 192
++C + L SS+ I+L G ++ +S +R +GT
Sbjct: 215 INCTYVALYPSSVQVIALGVGVSNFLSSTRTAETGT 250
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 22.2 bits (45), Expect = 4.5
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +3
Query: 360 LENKPEGTFLLRDSAQEEHLFSVSFRKYGRSLHARIE 470
L++ PEG F +E HL R + + R+E
Sbjct: 273 LDSLPEGLFASTRDLREIHLAYNGLRDLPKGIFTRLE 309
>AB248729-1|BAF02606.1| 43|Apis mellifera distal-less protein.
Length = 43
Score = 22.2 bits (45), Expect = 4.5
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -3
Query: 455 QRAPVLAERHREQVLLLRGVTQQERALWF 369
QR LA R ++ G+TQ + +WF
Sbjct: 1 QRTQYLALPERAELAASLGLTQTQVKIWF 29
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,286
Number of Sequences: 438
Number of extensions: 3314
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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