Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00241
         (753 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   2.0  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    22   6.0  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    22   6.0  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    22   6.0  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    22   6.0  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    22   6.0  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +3

Query: 90  LKLRVRKDTC*FIKMTEVLQPGNET 164
           +K+ ++  T  FIK  E L+PGN++
Sbjct: 108 VKIMLQNATDLFIKSLESLKPGNQS 132


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = +2

Query: 194 GWCFVGSFSDDWRLQNRTFGGVKKLDT 274
           GW   G+    W L  +     KKL T
Sbjct: 218 GWSMSGTMLVPWALMEQPLAQTKKLAT 244


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = +2

Query: 194 GWCFVGSFSDDWRLQNRTFGGVKKLDT 274
           GW   G+    W L  +     KKL T
Sbjct: 218 GWSMSGTMLVPWALMEQPLAQTKKLAT 244


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = +2

Query: 194 GWCFVGSFSDDWRLQNRTFGGVKKLDT 274
           GW   G+    W L  +     KKL T
Sbjct: 218 GWSMSGTMLVPWALMEQPLAQTKKLAT 244


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = +2

Query: 194 GWCFVGSFSDDWRLQNRTFGGVKKLDT 274
           GW   G+    W L  +     KKL T
Sbjct: 218 GWSMSGTMLVPWALMEQPLAQTKKLAT 244


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = +2

Query: 194 GWCFVGSFSDDWRLQNRTFGGVKKLDT 274
           GW   G+    W L  +     KKL T
Sbjct: 218 GWSMSGTMLVPWALMEQPLAQTKKLAT 244


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,170
Number of Sequences: 336
Number of extensions: 3586
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)