Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00239
         (513 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   4.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.5  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 12/48 (25%), Positives = 24/48 (50%)
 Frame = -2

Query: 326 LFSLRFTYFRLHITLSHNVTK*STTIARWNFWVLLVRFFACSSSWPFL 183
           +F    +++R+ +   +N+T   + I   N  +  + FF  + SWP L
Sbjct: 242 IFMTTTSFYRI-LNSGYNLTTFGSFIFNANSAIEGIIFFNLAKSWPQL 288


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 8/38 (21%), Positives = 18/38 (47%)
 Frame = -3

Query: 349 CSFAALMACSLCALRTSGFILRLAIMSLSEAPQSHVGT 236
           CS A  + C L    T+  ++ +  + +  +  ++V T
Sbjct: 416 CSLAIFVLCELLIEGTTSILINVPSLIIHVSTSAYVAT 453


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,015
Number of Sequences: 336
Number of extensions: 1740
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12258909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)