Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00237
         (453 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0591 + 4261483-4261631,4261837-4262007,4262127-4262226,426...    31   0.43 
07_01_0042 - 334417-334431,334563-334688,334852-335136,335220-33...    31   0.57 
06_01_0988 - 7660092-7660168,7660260-7660328,7660418-7660462,766...    28   4.0  
03_05_1111 - 30479793-30479823,30479887-30479978,30480261-304804...    27   7.1  

>06_01_0591 +
           4261483-4261631,4261837-4262007,4262127-4262226,
           4263151-4263315,4263416-4263544,4263758-4263858,
           4264527-4264596,4265080-4265331,4265828-4265897,
           4266281-4266341,4266916-4267003,4267746-4267830,
           4268168-4268234,4268442-4268559,4268843-4268923,
           4269022-4269267,4269670-4269771,4269847-4269914,
           4270040-4270171,4270283-4270430,4270504-4270790,
           4270920-4271067,4271156-4271331,4271407-4271518,
           4271614-4271667,4273134-4273244,4273317-4273478,
           4273627-4273814,4273948-4274137,4274297-4274464,
           4274832-4274912
          Length = 1359

 Score = 31.1 bits (67), Expect = 0.43
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +2

Query: 287 QLSNLTLTTEHRWYPRARDKKGQKTGMD*PYLEPSYFYWYRC-NIACF 427
           +L     T   R   R RD  G+ TG D P + P Y  W+R  N+  F
Sbjct: 29  ELRGAETTRVERRRERRRDALGRGTGGDSPRVSPIYILWFRSRNLVVF 76


>07_01_0042 -
           334417-334431,334563-334688,334852-335136,335220-335368,
           336239-336536,337030-337131,337245-337613,337973-338115,
           338334-338518,339246-339475,339734-339821,340158-340253,
           340397-340512,340604-340852,340950-341175,341411-341622
          Length = 962

 Score = 30.7 bits (66), Expect = 0.57
 Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
 Frame = -3

Query: 232 RHFQNCIIFTCLFW*SS*IARKENHSLDEELQW*SHRQ*SLFYCRIYLMP---LLGLMLF 62
           RH    +I  CLF+ SS       H LD  ++W S     + +  +Y +P    +G+ + 
Sbjct: 36  RHIMTAVIIACLFFISSDNMHTLIHKLDNNIKWWSMYVAWICFASLYHLPSFQSMGVDMR 95

Query: 61  CELNRTFYLYF 29
             L+    +YF
Sbjct: 96  MNLSLFLTIYF 106


>06_01_0988 -
           7660092-7660168,7660260-7660328,7660418-7660462,
           7660683-7660767,7660930-7661041,7661113-7661228,
           7661325-7661495,7661572-7661703,7662278-7662366,
           7662761-7662824,7663043-7663148,7663507-7663613,
           7663744-7663797,7664105-7664226,7664593-7664748,
           7664861-7665059
          Length = 567

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
 Frame = -1

Query: 432 EVKQAILHLYQ*K*EGSK*GQSIPVFWPFLSRALGYH-RCSVVNVRFDSCFLANSGFIHG 256
           E ++ ++ + + + E  K     P  +   S   GY  RC +  + FDS +    G+  G
Sbjct: 405 ETEKMLIAMVETELEKRKAEGKYPAHFRGQSHFFGYEGRCGLPTI-FDSNYCYALGYGSG 463

Query: 255 ALLTSSKSGIFKTVLSL 205
           ALL   K+G+  +V +L
Sbjct: 464 ALLQCGKTGLITSVGNL 480


>03_05_1111 -
           30479793-30479823,30479887-30479978,30480261-30480410,
           30482229-30482354,30482563-30482628,30483134-30483214,
           30483310-30483422,30483553-30483721,30484253-30484330,
           30485489-30485752,30486239-30486379,30486548-30486759,
           30486819-30486940,30487281-30487398,30487925-30487997
          Length = 611

 Score = 27.1 bits (57), Expect = 7.1
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +2

Query: 305 LTTEHRWYPRARDKK 349
           LT  H WYP AR+KK
Sbjct: 63  LTHPHIWYPNAREKK 77


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,874,863
Number of Sequences: 37544
Number of extensions: 170921
Number of successful extensions: 393
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 393
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 883560296
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)