Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00236
         (315 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   3.1  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   3.1  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   3.1  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   3.1  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   3.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      20   7.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      20   7.1  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    20   7.1  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    19   9.4  

>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 3.1
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +1

Query: 40  GGEPDKDTCRGDGGS 84
           GG PD  T  GDG S
Sbjct: 187 GGTPDSITLFGDGTS 201



 Score = 20.2 bits (40), Expect = 5.4
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +1

Query: 151 IGCGEDGT 174
           +GCG DGT
Sbjct: 246 VGCGTDGT 253


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 3.1
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +1

Query: 40  GGEPDKDTCRGDGGS 84
           GG PD  T  GDG S
Sbjct: 187 GGTPDSITLFGDGTS 201



 Score = 20.2 bits (40), Expect = 5.4
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +1

Query: 151 IGCGEDGT 174
           +GCG DGT
Sbjct: 246 VGCGTDGT 253


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 3.1
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +1

Query: 40  GGEPDKDTCRGDGGS 84
           GG PD  T  GDG S
Sbjct: 187 GGTPDSITLFGDGTS 201


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 3.1
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +1

Query: 40  GGEPDKDTCRGDGGS 84
           GG PD  T  GDG S
Sbjct: 187 GGTPDSITLFGDGTS 201


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 3.1
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +1

Query: 40  GGEPDKDTCRGDGGS 84
           GG PD  T  GDG S
Sbjct: 187 GGTPDSITLFGDGTS 201


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 56  LSGSPPAHMNV 24
           LS  PPAHM +
Sbjct: 134 LSQPPPAHMGI 144


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 56 LSGSPPAHMNV 24
          LS  PPAHM +
Sbjct: 26 LSQPPPAHMGI 36


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = +3

Query: 45  GARQGHLQGGRGVAPRVPH 101
           G   G++ GG G     PH
Sbjct: 11  GIHPGYMDGGAGAGLYEPH 29


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
          protein.
          Length = 392

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 5/14 (35%), Positives = 9/14 (64%)
 Frame = -2

Query: 47 SPPAHMNVECNWKN 6
          +P   + +ECNW +
Sbjct: 9  NPQFGLQLECNWSS 22


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,521
Number of Sequences: 336
Number of extensions: 1003
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5836655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)