Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00233X
(368 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O17445 Cluster: 60S ribosomal protein L15; n=132; Eukar... 109 1e-23
UniRef50_P61313 Cluster: 60S ribosomal protein L15; n=69; Eukary... 104 4e-22
UniRef50_P91374 Cluster: 60S ribosomal protein L15; n=41; Eumeta... 94 6e-19
UniRef50_P41961 Cluster: 60S ribosomal protein L15; n=3; Eukaryo... 89 3e-17
UniRef50_A2YC64 Cluster: Ribosomal protein L15; n=6; Eukaryota|R... 66 1e-10
UniRef50_A3H928 Cluster: Ribosomal protein L15e; n=1; Caldivirga... 49 2e-05
UniRef50_O58706 Cluster: 50S ribosomal protein L15e; n=40; cellu... 46 3e-04
UniRef50_UPI0000DA2AC3 Cluster: PREDICTED: hypothetical protein;... 42 0.004
UniRef50_Q4JB20 Cluster: 50S ribosomal protein L15e; n=4; Thermo... 42 0.004
UniRef50_Q8ZWD8 Cluster: 50S ribosomal protein L15e; n=4; Pyroba... 42 0.005
UniRef50_UPI00015BB1DC Cluster: LSU ribosomal protein L15E; n=1;... 40 0.014
UniRef50_A0RW64 Cluster: Ribosomal protein L15E; n=2; Crenarchae... 37 0.10
UniRef50_Q9HSL2 Cluster: 50S ribosomal protein L15e; n=6; Euryar... 37 0.13
UniRef50_A7QR50 Cluster: Chromosome chr2 scaffold_148, whole gen... 33 1.7
UniRef50_A7PSH3 Cluster: Chromosome chr6 scaffold_28, whole geno... 33 1.7
UniRef50_Q6ZWG3 Cluster: CDNA FLJ41135 fis, clone BRACE2028970; ... 33 2.2
UniRef50_Q2QM64 Cluster: G-patch domain containing protein, expr... 32 3.8
UniRef50_A7PCP4 Cluster: Chromosome chr17 scaffold_12, whole gen... 32 3.8
UniRef50_A5BC76 Cluster: Putative uncharacterized protein; n=2; ... 32 3.8
UniRef50_A7F0C9 Cluster: Putative uncharacterized protein; n=1; ... 32 3.8
UniRef50_A7DNS0 Cluster: Ribosomal protein L15e; n=1; Candidatus... 32 3.8
UniRef50_A5ZID6 Cluster: Putative uncharacterized protein; n=1; ... 31 5.1
UniRef50_A2WJ63 Cluster: Putative uncharacterized protein; n=2; ... 31 6.7
UniRef50_A1K3L4 Cluster: General secretion pathway protein F; n=... 31 6.7
UniRef50_A0D7T3 Cluster: Chromosome undetermined scaffold_40, wh... 31 6.7
UniRef50_A4M7J6 Cluster: Flagellar motor switch protein FliM; n=... 31 8.9
>UniRef50_O17445 Cluster: 60S ribosomal protein L15; n=132;
Eukaryota|Rep: 60S ribosomal protein L15 - Drosophila
melanogaster (Fruit fly)
Length = 204
Score = 109 bits (263), Expect = 1e-23
Identities = 48/57 (84%), Positives = 54/57 (94%)
Frame = +2
Query: 26 MGAYRYIQELYRKKLSDVMRFLLRVXVWQSRQLTRMHRAPRPTRPDKARRLGYRAKQ 196
MGAYRY+QELYRKK SDVMR+LLR+ VWQ RQLT++HR+PRPTRPDKARRLGYRAKQ
Sbjct: 1 MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQ 57
Score = 71.3 bits (167), Expect = 5e-12
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +1
Query: 256 GATYGKPKTHGVNQLKPXRNLQSIAEERVGRRCGGLR 366
G TYGKPK+HGVNQLKP R LQSIAEERVGRR GGLR
Sbjct: 78 GCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLR 114
>UniRef50_P61313 Cluster: 60S ribosomal protein L15; n=69;
Eukaryota|Rep: 60S ribosomal protein L15 - Homo sapiens
(Human)
Length = 204
Score = 104 bits (250), Expect = 4e-22
Identities = 47/57 (82%), Positives = 52/57 (91%)
Frame = +2
Query: 26 MGAYRYIQELYRKKLSDVMRFLLRVXVWQSRQLTRMHRAPRPTRPDKARRLGYRAKQ 196
MGAY+YIQEL+RKK SDVMRFLLRV WQ RQL+ +HRAPRPTRPDKARRLGY+AKQ
Sbjct: 1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQ 57
Score = 62.5 bits (145), Expect = 2e-09
Identities = 28/37 (75%), Positives = 30/37 (81%)
Frame = +1
Query: 256 GATYGKPKTHGVNQLKPXRNLQSIAEERVGRRCGGLR 366
GATYGKP HGVNQLK R+LQS+AEER GR CG LR
Sbjct: 78 GATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALR 114
>UniRef50_P91374 Cluster: 60S ribosomal protein L15; n=41;
Eumetazoa|Rep: 60S ribosomal protein L15 -
Caenorhabditis elegans
Length = 204
Score = 94.3 bits (224), Expect = 6e-19
Identities = 39/57 (68%), Positives = 49/57 (85%)
Frame = +2
Query: 26 MGAYRYIQELYRKKLSDVMRFLLRVXVWQSRQLTRMHRAPRPTRPDKARRLGYRAKQ 196
MGAY+Y+QE++RKK SD +R+LLR+ W RQL+ +HR PRPTRP+KARRLGYRAKQ
Sbjct: 1 MGAYKYMQEIWRKKQSDALRYLLRIRTWHYRQLSAVHRVPRPTRPEKARRLGYRAKQ 57
Score = 58.0 bits (134), Expect = 5e-08
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +1
Query: 250 C*GATYGKPKTHGVNQLKPXRNLQSIAEERVGRRCGGLR 366
C G TYGKPKTHGVN+LK ++ Q++AE R GRR G LR
Sbjct: 76 CKGQTYGKPKTHGVNELKNAKSKQAVAEGRAGRRLGSLR 114
>UniRef50_P41961 Cluster: 60S ribosomal protein L15; n=3;
Eukaryota|Rep: 60S ribosomal protein L15 - Brugia
pahangi (Filarial nematode worm)
Length = 71
Score = 88.6 bits (210), Expect = 3e-17
Identities = 38/57 (66%), Positives = 47/57 (82%)
Frame = +2
Query: 26 MGAYRYIQELYRKKLSDVMRFLLRVXVWQSRQLTRMHRAPRPTRPDKARRLGYRAKQ 196
MGAYRY+QEL+RKK S+ MR+LLR+ WQ RQLT +HR RPTRP+KARRLGY + +
Sbjct: 1 MGAYRYMQELWRKKKSETMRYLLRIRCWQYRQLTAIHRVSRPTRPEKARRLGYLSNE 57
>UniRef50_A2YC64 Cluster: Ribosomal protein L15; n=6; Eukaryota|Rep:
Ribosomal protein L15 - Oryza sativa subsp. indica
(Rice)
Length = 438
Score = 66.5 bits (155), Expect = 1e-10
Identities = 34/57 (59%), Positives = 39/57 (68%)
Frame = +2
Query: 26 MGAYRYIQELYRKKLSDVMRFLLRVXVWQSRQLTRMHRAPRPTRPDKARRLGYRAKQ 196
MGAYR + EL+R+K SDVM F+ RV W R R RPTRPDKARRLG +AKQ
Sbjct: 1 MGAYRCVSELWRRKQSDVMTFVQRVRCWDHR---RQPAIGRPTRPDKARRLGDKAKQ 54
>UniRef50_A3H928 Cluster: Ribosomal protein L15e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L15e -
Caldivirga maquilingensis IC-167
Length = 185
Score = 49.2 bits (112), Expect = 2e-05
Identities = 21/57 (36%), Positives = 37/57 (64%)
Frame = +2
Query: 26 MGAYRYIQELYRKKLSDVMRFLLRVXVWQSRQLTRMHRAPRPTRPDKARRLGYRAKQ 196
MG RY+ ++++K D +R +++ + + R+ + R +PTR DKAR+ GY+AKQ
Sbjct: 1 MGTLRYVADIWKKPYEDPLRQVIKARLIKWRREPAILRVDKPTRIDKARKYGYKAKQ 57
>UniRef50_O58706 Cluster: 50S ribosomal protein L15e; n=40; cellular
organisms|Rep: 50S ribosomal protein L15e - Pyrococcus
horikoshii
Length = 194
Score = 45.6 bits (103), Expect = 3e-04
Identities = 23/57 (40%), Positives = 35/57 (61%)
Frame = +2
Query: 26 MGAYRYIQELYRKKLSDVMRFLLRVXVWQSRQLTRMHRAPRPTRPDKARRLGYRAKQ 196
MG Y+YI+E ++ + LL+ + + R+ + R RPTR D+AR LGY+AKQ
Sbjct: 1 MGMYKYIREAWKSPKKSYVGQLLKQRMIKWRREPSVVRIERPTRLDRARALGYQAKQ 57
>UniRef50_UPI0000DA2AC3 Cluster: PREDICTED: hypothetical protein;
n=2; Euarchontoglires|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 172
Score = 41.9 bits (94), Expect = 0.004
Identities = 37/98 (37%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = -3
Query: 336 FLSNGLKVARXLQLVDTMGLGLAISGTLATGRLRPPRRTR--ILNTT*PCLAR*PSLRAL 163
FLSN LK + +QLV+T+ LAIS TL + +TT L PSL
Sbjct: 78 FLSNRLKASGKVQLVNTVVNRLAISCTLRKWAFSTTTADTNPVKDTTLLSLVSQPSL--- 134
Query: 162 SGLVGLGARCIRVN*RDCHTXTRNKKRITSLSFFLYNS 49
SG +G GA N + C T +K I S FFL++S
Sbjct: 135 SGWMGWGALYSAENWQYCQQWTLRRKHIMSDCFFLHSS 172
>UniRef50_Q4JB20 Cluster: 50S ribosomal protein L15e; n=4;
Thermoprotei|Rep: 50S ribosomal protein L15e -
Sulfolobus acidocaldarius
Length = 217
Score = 41.9 bits (94), Expect = 0.004
Identities = 22/57 (38%), Positives = 35/57 (61%)
Frame = +2
Query: 26 MGAYRYIQELYRKKLSDVMRFLLRVXVWQSRQLTRMHRAPRPTRPDKARRLGYRAKQ 196
+ Y YI++ ++ K D R +LR + + R+ + R RPTR ++AR LGY+AKQ
Sbjct: 3 LSMYHYIEQTWQNK--DWRRSILRKRLIEWRRQPAITRIDRPTRLNRARALGYKAKQ 57
>UniRef50_Q8ZWD8 Cluster: 50S ribosomal protein L15e; n=4;
Pyrobaculum|Rep: 50S ribosomal protein L15e -
Pyrobaculum aerophilum
Length = 191
Score = 41.5 bits (93), Expect = 0.005
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +2
Query: 32 AYRYIQELYRKKLSDVMRFLLRVXVWQSRQLTRMHRAPRPTRPDKARRLGYRAKQ 196
AY Y+ YRK +V L+R + + R+ + R RP R ++AR+LGY+AKQ
Sbjct: 5 AYSYMAMWYRKIGREVHERLMRKILIEWRKAPAIVRVERPFRLERARKLGYKAKQ 59
>UniRef50_UPI00015BB1DC Cluster: LSU ribosomal protein L15E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L15E - Ignicoccus hospitalis KIN4/I
Length = 245
Score = 39.9 bits (89), Expect = 0.014
Identities = 19/61 (31%), Positives = 35/61 (57%)
Frame = +2
Query: 14 QAAKMGAYRYIQELYRKKLSDVMRFLLRVXVWQSRQLTRMHRAPRPTRPDKARRLGYRAK 193
Q+ G Y +++E +++ L++ + + R+ + R +PTR D+AR LGY+AK
Sbjct: 19 QSMARGLYHFLREQWKRPFDGEHGELMKQRIIKWRREPAVVRIEKPTRLDRARALGYKAK 78
Query: 194 Q 196
Q
Sbjct: 79 Q 79
>UniRef50_A0RW64 Cluster: Ribosomal protein L15E; n=2;
Crenarchaeota|Rep: Ribosomal protein L15E - Cenarchaeum
symbiosum
Length = 152
Score = 37.1 bits (82), Expect = 0.10
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = +2
Query: 95 RVXVWQSRQLTRMHRAPRPTRPDKARRLGYRAKQ 196
RV +W R+ + R RPTR D+AR LGY+AKQ
Sbjct: 23 RVIIW--RKQNAVTRIERPTRIDRARSLGYKAKQ 54
>UniRef50_Q9HSL2 Cluster: 50S ribosomal protein L15e; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L15e -
Halobacterium salinarium (Halobacterium halobium)
Length = 196
Score = 36.7 bits (81), Expect = 0.13
Identities = 19/34 (55%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Frame = +2
Query: 107 WQSRQLTR----MHRAPRPTRPDKARRLGYRAKQ 196
WQ +Q R + R RPTR DKAR LGY+AKQ
Sbjct: 26 WQRKQDWRKEGAIERVDRPTRLDKARELGYKAKQ 59
Score = 31.9 bits (69), Expect = 3.8
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 271 KPKTHGVNQLKPXRNLQSIAEERVGRRCGGLR 366
+ K GVN++ +NLQ IAEER R+ LR
Sbjct: 83 RTKRQGVNRIGRAKNLQRIAEERASRKYVNLR 114
>UniRef50_A7QR50 Cluster: Chromosome chr2 scaffold_148, whole genome
shotgun sequence; n=5; Vitis vinifera|Rep: Chromosome
chr2 scaffold_148, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 228
Score = 33.1 bits (72), Expect = 1.7
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = -2
Query: 277 WACHKWHPSNWTLAATTSHTDSEYNITLFSTVA*S-SGFVRPCGPGSAVHTSQLTGLPY 104
W C + +N L+ S++D ++ LF + S GFVR C P A+ ++ ++G PY
Sbjct: 113 WMCERMLATNPGLSVELSYSDDDHFEKLFVAHSISIEGFVRGCRPIIAIDSTHMSG-PY 170
>UniRef50_A7PSH3 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 313
Score = 33.1 bits (72), Expect = 1.7
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +1
Query: 271 KPKTHGVNQLKPXRNLQSIAEERVGRRCGGLR 366
+P GV QLK RN + EER GR+ GL+
Sbjct: 2 EPTNQGVTQLKFHRNKSLVTEERDGRKLAGLK 33
>UniRef50_Q6ZWG3 Cluster: CDNA FLJ41135 fis, clone BRACE2028970;
n=2; Homo sapiens|Rep: CDNA FLJ41135 fis, clone
BRACE2028970 - Homo sapiens (Human)
Length = 142
Score = 32.7 bits (71), Expect = 2.2
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +1
Query: 109 AVPSVDSYAPRSQAHKAGQSPKTRLPC*TRLCCIQNPCATWWPQA--SSC*GATYGKPKT 282
A P V+S+ PR+Q H A P+T P T + + PC W + SSC G G +
Sbjct: 42 AHPQVESWVPRAQTHPA--PPQTWAPFFT-MHSSEQPCRQTWRASVLSSCEGLCLGPWRH 98
Query: 283 HGVNQLKPXRNLQSI 327
G + N++ +
Sbjct: 99 CGAGTGRAPANIKGV 113
>UniRef50_Q2QM64 Cluster: G-patch domain containing protein,
expressed; n=3; Oryza sativa|Rep: G-patch domain
containing protein, expressed - Oryza sativa subsp.
japonica (Rice)
Length = 844
Score = 31.9 bits (69), Expect = 3.8
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +3
Query: 207 YSESVCDVVAASVQLLGCHLWQAQDP 284
Y++ VC+V+ +V++ G + W+A+DP
Sbjct: 480 YAQLVCEVILPAVRISGTNSWEARDP 505
>UniRef50_A7PCP4 Cluster: Chromosome chr17 scaffold_12, whole genome
shotgun sequence; n=20; Vitis vinifera|Rep: Chromosome
chr17 scaffold_12, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 551
Score = 31.9 bits (69), Expect = 3.8
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = -2
Query: 277 WACHKWHPSNWTLAATTSHTDSEYNITLFSTVA*S-SGFVRPCGPGSAVHTSQLTGLPY 104
W C + +N + S++D ++ LF + + S GFVR C P A+ ++ ++G PY
Sbjct: 113 WMCERMLATNPGSSVELSYSDDDHFAKLFVSHSISIEGFVRGCRPIIAIDSAHMSG-PY 170
>UniRef50_A5BC76 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 1226
Score = 31.9 bits (69), Expect = 3.8
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -2
Query: 280 SWACHKWHPSNWTLAATTSHTDSEYNITLFSTVA*S-SGFVRPCGPGSAVHTSQLTGLPY 104
SW C + +N + S++D ++ LF + S GFVR C P A+ ++ ++G PY
Sbjct: 391 SWMCERMIATNPGSSVELSYSDDDHFEKLFIAHSISIEGFVRGCQPIIAIDSAXMSG-PY 449
>UniRef50_A7F0C9 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 116
Score = 31.9 bits (69), Expect = 3.8
Identities = 23/77 (29%), Positives = 30/77 (38%)
Frame = +1
Query: 118 SVDSYAPRSQAHKAGQSPKTRLPC*TRLCCIQNPCATWWPQASSC*GATYGKPKTHGVNQ 297
S D +P+ A LP + CIQ CA W+ +S GKP V
Sbjct: 13 SADIRSPKHLAQHKDSKAAEDLPGLGKWYCIQ--CAKWYESENSMLSHLKGKPHKRRVKA 70
Query: 298 LKPXRNLQSIAEERVGR 348
LK Q AE +G+
Sbjct: 71 LKEGPYTQRDAEAAIGQ 87
>UniRef50_A7DNS0 Cluster: Ribosomal protein L15e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L15e - Candidatus Nitrosopumilus maritimus SCM1
Length = 190
Score = 31.9 bits (69), Expect = 3.8
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 95 RVXVWQSRQLTRMHRAPRPTRPDKARRLGYRAKQ 196
RV W R+ + R +P+R +ARRLGY+AKQ
Sbjct: 62 RVVGW--RKQNAVTRIDKPSRIQRARRLGYKAKQ 93
>UniRef50_A5ZID6 Cluster: Putative uncharacterized protein; n=1;
Bacteroides caccae ATCC 43185|Rep: Putative
uncharacterized protein - Bacteroides caccae ATCC 43185
Length = 571
Score = 31.5 bits (68), Expect = 5.1
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2
Query: 325 WIEGCAXASTG*HHGSWACHKWHP 254
W+EG A S HG WAC W+P
Sbjct: 347 WLEG-ARGSQNWQHGGWACAYWNP 369
>UniRef50_A2WJ63 Cluster: Putative uncharacterized protein; n=2;
Burkholderia dolosa AUO158|Rep: Putative uncharacterized
protein - Burkholderia dolosa AUO158
Length = 417
Score = 31.1 bits (67), Expect = 6.7
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = -3
Query: 333 LSNGLKVARXLQLVDTMGLGLAISGTLATGRLRPPRR 223
LS G+ +AR + T+G+G+A+ G LATG++ P R
Sbjct: 252 LSQGVTLARVG--LSTVGIGIAVLGILATGQIVPALR 286
>UniRef50_A1K3L4 Cluster: General secretion pathway protein F; n=1;
Azoarcus sp. BH72|Rep: General secretion pathway protein
F - Azoarcus sp. (strain BH72)
Length = 401
Score = 31.1 bits (67), Expect = 6.7
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -3
Query: 300 QLVDTMGLGLAISGTLATGRLRPPRRTRIL 211
Q+ D + G +SG LA+ R+ PPR TR+L
Sbjct: 305 QVADDIAAGADLSGALASTRVFPPRVTRML 334
>UniRef50_A0D7T3 Cluster: Chromosome undetermined scaffold_40, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_40,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 448
Score = 31.1 bits (67), Expect = 6.7
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +2
Query: 26 MGAYRYIQELYRKKLSDVMRFLLRVXVWQSRQLTRMHRAPRPTRPDKARRL 178
+ + Y E Y K+ + R LLRV + RM+ A RP+R K +RL
Sbjct: 102 LNSINYPPEYYNAKVERLQRPLLRVFMRAQENDYRMNMAFRPSRAYKQKRL 152
>UniRef50_A4M7J6 Cluster: Flagellar motor switch protein FliM; n=1;
Petrotoga mobilis SJ95|Rep: Flagellar motor switch
protein FliM - Petrotoga mobilis SJ95
Length = 359
Score = 30.7 bits (66), Expect = 8.9
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Frame = -2
Query: 202 ITLFSTVA*SSGFVRPCGPGSAVH------TSQLTGLPYXHTQQKTHNIAQFFPIQLLNI 41
ITL T+ GFV C P S++ T+++ Y HT++ N+ Q + LN+
Sbjct: 203 ITLSVTIKNVQGFVNLCFPSSSLEPLNDKLTTRMWTTSYRHTEEFKENLRQSLLLSKLNL 262
Query: 40 S 38
S
Sbjct: 263 S 263
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 391,150,693
Number of Sequences: 1657284
Number of extensions: 7658276
Number of successful extensions: 18806
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 18365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18798
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 13647406432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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