Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00233X
         (368 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   2.6  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   3.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   3.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   4.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   4.6  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    20   8.1  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    20   8.1  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    20   8.1  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 6   VCHRLLRWVPTDI 44
           VCH  + W+PT +
Sbjct: 807 VCHNGMNWMPTHL 819


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -1

Query: 176 VFGLCPALWAWERGAYESTD 117
           +  +C  LW W R  Y  T+
Sbjct: 51  ILPVCNGLWRWIRLTYGQTN 70


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -1

Query: 176 VFGLCPALWAWERGAYESTD 117
           +  +C  LW W R  Y  T+
Sbjct: 89  ILPVCNGLWRWIRLTYGQTN 108


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -1

Query: 170 GLCPALWAWERGAY 129
           GLCP++  ++RG +
Sbjct: 357 GLCPSMANYDRGVF 370


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -1

Query: 170 GLCPALWAWERGAY 129
           GLCP++  ++RG +
Sbjct: 447 GLCPSMANYDRGVF 460


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -3

Query: 162 SGLVGLGARCIRVN*RDCHTXTRNKKRITSLSFFLYNS 49
           SG+VG GA C        HT +    +I ++   LY +
Sbjct: 415 SGIVGFGAYCA------AHTDSSGAMKIVNMLNQLYTA 446


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 119 QLTRMHRAPRPTRPDKARRLG 181
           QLT+++ A    RP+   R G
Sbjct: 219 QLTKLNNAVEEKRPELTNRKG 239


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 5/10 (50%), Positives = 7/10 (70%)
 Frame = -1

Query: 248 LDACGHHVAH 219
           + AC HH+ H
Sbjct: 567 IQACSHHLTH 576


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,811
Number of Sequences: 438
Number of extensions: 2232
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8804355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)