Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00231
         (677 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.3  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   7.0  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   7.0  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   7.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   7.0  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   7.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 376 YKFCLSVGFNVM*LNLHTSKFF 441
           Y +C+S+ FNV  L L  S +F
Sbjct: 58  YFYCVSITFNVHLLFLLCSGYF 79


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -2

Query: 454 CLISRKTLMCVNSITLH*NQH*G 386
           C+I  + L C +++ +H   H G
Sbjct: 137 CVICHRVLSCKSALQMHYRTHTG 159


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -2

Query: 574 YNCICLDATKDETSQLACFRVFLDVRLKHLCSF 476
           YN +  D+      +L      LD+ LKH+ +F
Sbjct: 248 YNILLCDSVAHTAGELLGAVYSLDLELKHIENF 280


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -2

Query: 574 YNCICLDATKDETSQLACFRVFLDVRLKHLCSF 476
           YN +  D+      +L      LD+ LKH+ +F
Sbjct: 248 YNILLCDSVAHTAGELLGAVYSLDLELKHIENF 280


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -2

Query: 574 YNCICLDATKDETSQLACFRVFLDVRLKHLCSF 476
           YN +  D+      +L      LD+ LKH+ +F
Sbjct: 568 YNILLCDSVAHTAGELLGAVYSLDLELKHIENF 600


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = -2

Query: 499 RLKHLCSFLHIKYHCCLISRKTLMCVNSITLH*NQH 392
           ++K  C  L   +   +I    L CV  +    NQH
Sbjct: 307 KVKDFCQNLDKAHQESIIMNNILPCVKELVADPNQH 342


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,564
Number of Sequences: 336
Number of extensions: 3033
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)