Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00230
         (825 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    25   0.73 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   2.9  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    23   2.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.9  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   3.9  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   3.9  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   3.9  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   6.8  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   9.0  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 25.0 bits (52), Expect = 0.73
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = -2

Query: 155 ISIANFELIQRFERDQNHVQRFRYILTHIRLKLIKA 48
           I +  FE+ + FERD+N +  F  ++   ++K+  A
Sbjct: 257 IRLITFEMNKSFERDKNKLGDFVALIRDAQVKITAA 292


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 388 HSDLDRIACRQCQFKNTY 441
           HS++ R +CR C +   Y
Sbjct: 281 HSNVYRYSCRDCSYATKY 298


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 388 HSDLDRIACRQCQFKNTY 441
           HS++ R +CR C +   Y
Sbjct: 39  HSNVYRYSCRDCSYATKY 56


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = -1

Query: 237 LFFIFLVEFQFIYFSIFFKNIELSPVLNKYSKFRVNPTF*KGSKSCSKIPL 85
           L+  FL+  + ++    FKN  LS ++ ++  F    TF  G  + S + L
Sbjct: 438 LYATFLIALKLVWIVALFKNENLSEMVKQF-LFTQKFTFVAGLATLSVLNL 487


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -1

Query: 162 VLNKYSKFRVNPTF*KGSKSCSKIPLHTNTYTSEANKSVLKH 37
           V+N+  + R +PTF +    C  +   +N  T E    +L+H
Sbjct: 359 VMNELDR-RDDPTFDESLPGCHMVDSCSNIQTGEQFARLLRH 399


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -1

Query: 162 VLNKYSKFRVNPTF*KGSKSCSKIPLHTNTYTSEANKSVLKH 37
           V+N+  + R +PTF +    C  +   +N  T E    +L+H
Sbjct: 366 VMNELDR-RDDPTFDESLPGCHMVDSCSNIQTGEQFARLLRH 406


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 447 YHSLLVDEFFCSII 488
           Y  +LV +FFCS++
Sbjct: 249 YQGILVVQFFCSLV 262


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +3

Query: 396 FRPYCVPAVSIQEYIFLYHSLLV 464
           F P+ +  +S+   IFL++  L+
Sbjct: 232 FEPFLISNISLVSLIFLFNCTLI 254


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 86  NGIFEHDFDPFQN 124
           N ++E DFD F+N
Sbjct: 282 NSLYELDFDTFRN 294


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,832
Number of Sequences: 336
Number of extensions: 3032
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22621642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)