Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00229X
         (458 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   1.4  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   4.2  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   4.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   5.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   5.5  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    20   9.6  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    20   9.6  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -3

Query: 333 MIGICVPSKSLYPFMATMHHNPM 265
           M+  C P        A +HHNPM
Sbjct: 330 MVNRCHPLSLSSDHQAMLHHNPM 352


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = -3

Query: 315 PSKSLYPFMATMHHN 271
           P+  +YP+++  HH+
Sbjct: 56  PAARMYPYVSAAHHH 70


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = -3

Query: 315 PSKSLYPFMATMHHN 271
           P+  +YP+++  HH+
Sbjct: 56  PAARMYPYVSAAHHH 70


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 303 LYPFMATMHHNPMDSPERLKV 241
           +YPF A  +  P+ SPE  +V
Sbjct: 164 MYPFPAGQYPYPILSPEMSQV 184


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 303 LYPFMATMHHNPMDSPERLKV 241
           +YPF A  +  P+ SPE  +V
Sbjct: 56  MYPFPAGQYPYPILSPEMSQV 76


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 5/14 (35%), Positives = 10/14 (71%)
 Frame = +1

Query: 238 KDFQSFWGVHGIVM 279
           K+F+  W  HG+++
Sbjct: 166 KEFREVWDQHGLLL 179


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 174 QAPSLPILLLIFSY 133
           QAP L + L IF+Y
Sbjct: 129 QAPVLQLFLYIFTY 142


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,530
Number of Sequences: 336
Number of extensions: 2146
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)