Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00229X
         (458 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical p...    58   2e-09
AF101316-3|AAC69232.2|  508|Caenorhabditis elegans Hypothetical ...    29   1.2  
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p...    29   2.1  
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr...    29   2.1  
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.      29   2.1  
U40958-3|ABQ13075.1|  219|Caenorhabditis elegans Hypothetical pr...    28   2.8  
AF100673-3|ABA00151.1|  950|Caenorhabditis elegans Hypothetical ...    27   8.7  
AF100673-2|AAU05553.1|  899|Caenorhabditis elegans Hypothetical ...    27   8.7  
AF100673-1|AAP13733.1|  897|Caenorhabditis elegans Hypothetical ...    27   8.7  

>Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical
           protein F25H2.11 protein.
          Length = 181

 Score = 58.4 bits (135), Expect = 2e-09
 Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
 Frame = +3

Query: 3   SAEEA--DEGTDSAVESGVDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPD 176
           SAEE   D+G+D  VE G+DIVLNH+LVE   + D   +  Y+K +MK ++  +E+   D
Sbjct: 50  SAEEGAEDDGSDEHVERGIDIVLNHKLVEMNCYEDASMFKAYIKKFMKNVIDHMEKNNRD 109

Query: 177 QVEV 188
           + +V
Sbjct: 110 KADV 113



 Score = 29.9 bits (64), Expect = 0.93
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 284 VAMNGYRDFDGTQIPIMMFFKHGLEE 361
           VA+  YRD DGT++P +M  K  + E
Sbjct: 153 VAIIEYRDVDGTEVPTLMLVKEAIIE 178


>AF101316-3|AAC69232.2|  508|Caenorhabditis elegans Hypothetical
           protein F52F10.2 protein.
          Length = 508

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 209 FVHVCFKYFNLVRRLLFQFCY*FFHI 132
           F+++C +Y    RR L  FCY  F I
Sbjct: 137 FIYLCIEYLPTGRRYLMMFCYILFDI 162


>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
           protein C02F4.1 protein.
          Length = 1781

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +3

Query: 102 KKSYTLYLKDYMKKLVAKLEEK 167
           +K+Y  YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775


>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical
           protein C02F4.1 protein.
          Length = 1781

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +3

Query: 102 KKSYTLYLKDYMKKLVAKLEEK 167
           +K+Y  YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775


>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
          Length = 1781

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +3

Query: 102 KKSYTLYLKDYMKKLVAKLEEK 167
           +K+Y  YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775


>U40958-3|ABQ13075.1|  219|Caenorhabditis elegans Hypothetical
           protein F09F9.5 protein.
          Length = 219

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 161 FQFCY*FFHIVFEVQCVGFLVTEGVCF 81
           +Q C+ F H+      +GF    GVCF
Sbjct: 53  YQTCFGFMHVKIATCSIGFFALLGVCF 79


>AF100673-3|ABA00151.1|  950|Caenorhabditis elegans Hypothetical
           protein Y66H1B.2c protein.
          Length = 950

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -3

Query: 327 GICVPSKSLYPFMATMHHNPMDSPERL 247
           GIC+P +  + F+  ++ +PMD   RL
Sbjct: 459 GICLPDQESHLFLKLLNTSPMDITARL 485


>AF100673-2|AAU05553.1|  899|Caenorhabditis elegans Hypothetical
           protein Y66H1B.2b protein.
          Length = 899

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -3

Query: 327 GICVPSKSLYPFMATMHHNPMDSPERL 247
           GIC+P +  + F+  ++ +PMD   RL
Sbjct: 408 GICLPDQESHLFLKLLNTSPMDITARL 434


>AF100673-1|AAP13733.1|  897|Caenorhabditis elegans Hypothetical
           protein Y66H1B.2a protein.
          Length = 897

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -3

Query: 327 GICVPSKSLYPFMATMHHNPMDSPERL 247
           GIC+P +  + F+  ++ +PMD   RL
Sbjct: 406 GICLPDQESHLFLKLLNTSPMDITARL 432


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,832,837
Number of Sequences: 27780
Number of extensions: 198157
Number of successful extensions: 507
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 507
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)