Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00229X
(458 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g16640.1 68416.m02127 translationally controlled tumor family... 45 2e-05
At3g05540.1 68416.m00607 translationally controlled tumor family... 41 3e-04
At2g17050.1 68415.m01968 disease resistance protein (TIR-NBS-LRR... 28 2.6
At1g04350.1 68414.m00425 2-oxoglutarate-dependent dioxygenase, p... 28 3.5
At1g44120.1 68414.m05096 C2 domain-containing protein / armadill... 27 4.6
At1g66940.2 68414.m07609 protein kinase-related 27 6.1
At5g15630.1 68418.m01829 phytochelatin synthetase family protein... 27 8.1
At1g04580.1 68414.m00451 aldehyde oxidase, putative similar to a... 27 8.1
>At3g16640.1 68416.m02127 translationally controlled tumor family
protein similar to translationally controlled tumor
protein GB:AAD10032 from [Hevea brasiliensis]
Length = 168
Score = 45.2 bits (102), Expect = 2e-05
Identities = 31/66 (46%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = +3
Query: 3 SAEEA--DEGTDSAVESGVDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPD 176
SAEE DEG D + + VDIV RL E + DKK + Y+K Y+K L KL E+ D
Sbjct: 50 SAEEGGEDEGVDDSTQKVVDIVDTFRLQEQPTY-DKKGFIAYIKKYIKLLTPKLSEE--D 106
Query: 177 QVEVFK 194
Q VFK
Sbjct: 107 QA-VFK 111
>At3g05540.1 68416.m00607 translationally controlled tumor family
protein similar to translationally controlled tumor
protein GB:AAD10032 from [Hevea brasiliensis]
Length = 156
Score = 41.1 bits (92), Expect = 3e-04
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Frame = +3
Query: 3 SAEEA--DEGTDSAVESGVDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPD 176
S EE DEG D VDI+ RL E +F DKK + +++K Y+K+L KL+ +
Sbjct: 37 SGEEGGEDEGVDDQAVKVVDIIDTFRLQEQPSF-DKKQFVMFMKRYIKQLSPKLDS---E 92
Query: 177 QVEVFKTNM 203
E+FK ++
Sbjct: 93 NQELFKKHI 101
>At2g17050.1 68415.m01968 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1355
Score = 28.3 bits (60), Expect = 2.6
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Frame = +3
Query: 24 GTDSAVESGVDIVLNHRLVETYAFGDKKSYTLYLK-------DYMKKLVAKLEEKAPDQV 182
G D +SG++ + + + Y G+ + +LY + D M+ + KL P +
Sbjct: 184 GIDWRKQSGLETLAPYYISVKYFSGNPLALSLYEEMLSHMKSDKMEVKLLKLNHPPPQIM 243
Query: 183 EVFKTNMNKVIE 218
EVFK+N N + E
Sbjct: 244 EVFKSNYNALNE 255
>At1g04350.1 68414.m00425 2-oxoglutarate-dependent dioxygenase,
putative Similar to Arabidopsis 2A6 (gb|X83096) and to
tomato ethylene synthesis regulatory protein E8
(SP|P10967); EST gb|T76913 comes from this gene
Length = 360
Score = 27.9 bits (59), Expect = 3.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 220 DILGRFKDFQSFWGVHGIVMHG 285
DI+G+ KD S WG ++ HG
Sbjct: 72 DIVGKIKDAASNWGFFQVINHG 93
>At1g44120.1 68414.m05096 C2 domain-containing protein /
armadillo/beta-catenin repeat family protein similar to
CCLS 65 [Silene latifolia] GI:2570102; contains Pfam
profiles PF00514: Armadillo/beta-catenin-like repeat,
PF00168: C2 domain
Length = 2114
Score = 27.5 bits (58), Expect = 4.6
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 331 DWYLRTIKVSISIHGNHASQSHGLPRKTESP*TCRGCLSI 212
D + K+ I++ SQ GL + T+SP CR +S+
Sbjct: 1752 DTISESAKILIAMALGDISQHEGLAKATDSPVACRALISL 1791
>At1g66940.2 68414.m07609 protein kinase-related
Length = 309
Score = 27.1 bits (57), Expect = 6.1
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -2
Query: 226 GCLSITLFMFVLNTSTWSGAFSSNFATNFFI*SLRYNV 113
G + TLF F+++ S + +FS+N + FF RY +
Sbjct: 272 GSFTDTLFSFMISVSQFLCSFSANCFSFFFAPFYRYRI 309
>At5g15630.1 68418.m01829 phytochelatin synthetase family protein /
COBRA cell expansion protein COBL4 similar to
phytochelatin synthetase [Hordeum vulgare subsp.
vulgare] GI:29570314; identified in Roudier, et al,
Plant Phys. (2002) 130:538-548 (PMID:12376623); contains
Pfam profile PF04833: Phytochelatin synthetase-like
conserved region
Length = 431
Score = 26.6 bits (56), Expect = 8.1
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -1
Query: 170 RLLFQFCY*FFHIVF 126
RLLF FC+ FF I+F
Sbjct: 2 RLLFSFCFFFFMIIF 16
>At1g04580.1 68414.m00451 aldehyde oxidase, putative similar to
aldehyde oxidases from Arabidopsis thaliana: GI:3172023,
GI:3172025, GI:3172044; identical to cDNA putative
aldehyde oxidase (AO2) mRNA, partial cds GI:2792305
Length = 1337
Score = 26.6 bits (56), Expect = 8.1
Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = -3
Query: 327 GICVPSKSLYPFMA-TMHHNPMDSPERLKVLKPAEDVFQLLCSC 199
G C P + + A + HN SP+ L L + + LC C
Sbjct: 114 GFCTPGMCISLYSALSKAHNSQSSPDYLTALAAEKSIAGNLCRC 157
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,276,531
Number of Sequences: 28952
Number of extensions: 184547
Number of successful extensions: 455
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 453
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 762235320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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