Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00227X
(431 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 122 8e-29
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 122 8e-29
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 122 8e-29
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 122 8e-29
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 122 8e-29
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 122 8e-29
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 122 8e-29
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 122 8e-29
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 122 8e-29
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 122 8e-29
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 121 3e-28
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 120 6e-28
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 120 6e-28
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 118 1e-27
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 118 1e-27
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 81 3e-16
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 65 2e-11
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 57 5e-09
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 38 0.003
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 31 0.36
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 31 0.36
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 30 0.62
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 29 1.1
Z72516-3|CAA96688.2| 1322|Caenorhabditis elegans Hypothetical pr... 27 5.8
AY874871-1|AAX62732.1| 1322|Caenorhabditis elegans chitin syntha... 27 5.8
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 122 bits (295), Expect = 8e-29
Identities = 55/59 (93%), Positives = 56/59 (94%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIVHGIVTNWDDMEMIWHHTF*NELRVAPEEHPVLLTEAPLNPKA 430
+EAQSKRGILTLKYPI HGIVTNWDDME IWHHTF NELRVAPEEHPVLLTEAPLNPKA
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Score = 120 bits (288), Expect = 6e-28
Identities = 54/62 (87%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDHGSGMCKAGYAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD+EVAALVVD+GSGMCKAG+AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 122 bits (295), Expect = 8e-29
Identities = 55/59 (93%), Positives = 56/59 (94%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIVHGIVTNWDDMEMIWHHTF*NELRVAPEEHPVLLTEAPLNPKA 430
+EAQSKRGILTLKYPI HGIVTNWDDME IWHHTF NELRVAPEEHPVLLTEAPLNPKA
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Score = 118 bits (285), Expect = 1e-27
Identities = 53/62 (85%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDHGSGMCKAGYAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD++VAALVVD+GSGMCKAG+AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 122 bits (295), Expect = 8e-29
Identities = 55/59 (93%), Positives = 56/59 (94%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIVHGIVTNWDDMEMIWHHTF*NELRVAPEEHPVLLTEAPLNPKA 430
+EAQSKRGILTLKYPI HGIVTNWDDME IWHHTF NELRVAPEEHPVLLTEAPLNPKA
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Score = 120 bits (288), Expect = 6e-28
Identities = 54/62 (87%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDHGSGMCKAGYAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD+EVAALVVD+GSGMCKAG+AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 122 bits (295), Expect = 8e-29
Identities = 55/59 (93%), Positives = 56/59 (94%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIVHGIVTNWDDMEMIWHHTF*NELRVAPEEHPVLLTEAPLNPKA 430
+EAQSKRGILTLKYPI HGIVTNWDDME IWHHTF NELRVAPEEHPVLLTEAPLNPKA
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Score = 120 bits (288), Expect = 6e-28
Identities = 54/62 (87%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDHGSGMCKAGYAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD+EVAALVVD+GSGMCKAG+AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 122 bits (295), Expect = 8e-29
Identities = 55/59 (93%), Positives = 56/59 (94%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIVHGIVTNWDDMEMIWHHTF*NELRVAPEEHPVLLTEAPLNPKA 430
+EAQSKRGILTLKYPI HGIVTNWDDME IWHHTF NELRVAPEEHPVLLTEAPLNPKA
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Score = 120 bits (288), Expect = 6e-28
Identities = 54/62 (87%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDHGSGMCKAGYAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD+EVAALVVD+GSGMCKAG+AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 122 bits (295), Expect = 8e-29
Identities = 55/59 (93%), Positives = 56/59 (94%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIVHGIVTNWDDMEMIWHHTF*NELRVAPEEHPVLLTEAPLNPKA 430
+EAQSKRGILTLKYPI HGIVTNWDDME IWHHTF NELRVAPEEHPVLLTEAPLNPKA
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Score = 117 bits (281), Expect = 4e-27
Identities = 51/62 (82%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDHGSGMCKAGYAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD++VAAL++D+GSGMCKAG+AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 122 bits (295), Expect = 8e-29
Identities = 55/59 (93%), Positives = 56/59 (94%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIVHGIVTNWDDMEMIWHHTF*NELRVAPEEHPVLLTEAPLNPKA 430
+EAQSKRGILTLKYPI HGIVTNWDDME IWHHTF NELRVAPEEHPVLLTEAPLNPKA
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Score = 120 bits (288), Expect = 6e-28
Identities = 54/62 (87%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDHGSGMCKAGYAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD+EVAALVVD+GSGMCKAG+AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 122 bits (295), Expect = 8e-29
Identities = 55/59 (93%), Positives = 56/59 (94%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIVHGIVTNWDDMEMIWHHTF*NELRVAPEEHPVLLTEAPLNPKA 430
+EAQSKRGILTLKYPI HGIVTNWDDME IWHHTF NELRVAPEEHPVLLTEAPLNPKA
Sbjct: 13 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 71
Score = 30.3 bits (65), Expect = 0.62
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3
Query: 219 MVGMGQKDSYVGMRHRAK 272
MVGMGQKDSYVG ++K
Sbjct: 1 MVGMGQKDSYVGDEAQSK 18
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 122 bits (295), Expect = 8e-29
Identities = 55/59 (93%), Positives = 56/59 (94%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIVHGIVTNWDDMEMIWHHTF*NELRVAPEEHPVLLTEAPLNPKA 430
+EAQSKRGILTLKYPI HGIVTNWDDME IWHHTF NELRVAPEEHPVLLTEAPLNPKA
Sbjct: 43 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 101
Score = 83.4 bits (197), Expect = 6e-17
Identities = 37/44 (84%), Positives = 41/44 (93%)
Frame = +3
Query: 141 KAGYAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
+AG+AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG ++K
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 48
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 122 bits (295), Expect = 8e-29
Identities = 55/59 (93%), Positives = 56/59 (94%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIVHGIVTNWDDMEMIWHHTF*NELRVAPEEHPVLLTEAPLNPKA 430
+EAQSKRGILTLKYPI HGIVTNWDDME IWHHTF NELRVAPEEHPVLLTEAPLNPKA
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Score = 120 bits (288), Expect = 6e-28
Identities = 54/62 (87%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDHGSGMCKAGYAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD+EVAALVVD+GSGMCKAG+AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 121 bits (291), Expect = 3e-28
Identities = 53/59 (89%), Positives = 56/59 (94%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIVHGIVTNWDDMEMIWHHTF*NELRVAPEEHPVLLTEAPLNPKA 430
+EAQSKRGILTLKYPI HGIVTNWDDME IWHHTF NELR+APEEHPVLLTEAPLNPK+
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKS 114
Score = 113 bits (272), Expect = 5e-26
Identities = 51/60 (85%), Positives = 57/60 (95%)
Frame = +3
Query: 93 DEEVAALVVDHGSGMCKAGYAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
+EE+AALVVD+GSGMCKAG+AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG ++K
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 120 bits (288), Expect = 6e-28
Identities = 54/62 (87%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDHGSGMCKAGYAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD+EVAALVVD+GSGMCKAG+AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
Score = 61.3 bits (142), Expect = 3e-10
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIVHGIVTNWDDMEMI 343
+EAQSKRGILTLKYPI HGIVTNWDDME I
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 120 bits (288), Expect = 6e-28
Identities = 54/62 (87%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDHGSGMCKAGYAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD+EVAALVVD+GSGMCKAG+AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
Score = 61.3 bits (142), Expect = 3e-10
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIVHGIVTNWDDMEMI 343
+EAQSKRGILTLKYPI HGIVTNWDDME I
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 118 bits (285), Expect = 1e-27
Identities = 53/62 (85%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDHGSGMCKAGYAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD++VAALVVD+GSGMCKAG+AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
Score = 61.3 bits (142), Expect = 3e-10
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIVHGIVTNWDDMEMI 343
+EAQSKRGILTLKYPI HGIVTNWDDME I
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 118 bits (285), Expect = 1e-27
Identities = 53/62 (85%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDHGSGMCKAGYAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD++VAALVVD+GSGMCKAG+AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
Score = 58.0 bits (134), Expect = 3e-09
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIVHGIVTNWDDM 334
+EAQSKRGILTLKYPI HGIVTNWDDM
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 81.0 bits (191), Expect = 3e-16
Identities = 33/57 (57%), Positives = 46/57 (80%), Gaps = 1/57 (1%)
Frame = +2
Query: 257 EAQSKRGILTLKYPIVHGIVTNWDDMEMIWHHTF-*NELRVAPEEHPVLLTEAPLNP 424
+A+S RG+ +++YP+ HGIV NW DME IW + F ++L++ PEEHPVLLT+APLNP
Sbjct: 60 KAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNP 116
Score = 51.6 bits (118), Expect = 2e-07
Identities = 21/48 (43%), Positives = 33/48 (68%)
Frame = +3
Query: 111 LVVDHGSGMCKAGYAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG 254
+V+D+GSG+ KAG+AG+ P+ F + VGRP++ VM G D ++G
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIG 58
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 64.9 bits (151), Expect = 2e-11
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +2
Query: 215 RDGRYGTEGLLCRNEAQSKRGILTLKYPIVHGIVTNWDDMEMIWHHTF*NE-LRVAPEEH 391
R G + L+ E R +L + YP+ +GIV NWDDM +W HTF E L + P+E
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKEC 105
Query: 392 PVLLTEAPLNPKA 430
+LLTE PLNP +
Sbjct: 106 KLLLTEPPLNPNS 118
Score = 45.2 bits (102), Expect = 2e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +3
Query: 111 LVVDHGSGMCKAGYAGDDAPRAVFPSIVGRP 203
+VVD+G+G K GYAG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 57.2 bits (132), Expect = 5e-09
Identities = 26/46 (56%), Positives = 29/46 (63%)
Frame = +2
Query: 284 TLKYPIVHGIVTNWDDMEMIWHHTF*NELRVAPEEHPVLLTEAPLN 421
T+KYPI HGIV +WD ME W LR PE+H LLTE PLN
Sbjct: 80 TVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLN 125
Score = 36.3 bits (80), Expect = 0.009
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 87 MCDEEVAALVVDHGSGMCKAGYAGDDAPRAVFPSIV 194
M ++ A V+D+G+G K GYAG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 37.9 bits (84), Expect = 0.003
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +2
Query: 308 GIVTNWDDMEMIWHHTF*NELRVAPEEHPVLLTEAPLNPKA 430
G++ +W+ E I H++ N L P EHPVL +E+ N +A
Sbjct: 97 GLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRA 137
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 31.1 bits (67), Expect = 0.36
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 296 PIVHGIVTNWDDMEMIWHHTF 358
PI G V NWD + IW TF
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 31.1 bits (67), Expect = 0.36
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 296 PIVHGIVTNWDDMEMIWHHTF 358
PI G V NWD + IW TF
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF 82
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 30.3 bits (65), Expect = 0.62
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +2
Query: 191 RGKAPPSGRDGRYGTEGLLCRNEAQSKRG 277
RGKA +GRDGR G EG Q +RG
Sbjct: 216 RGKAGHTGRDGRPGLEGTPGTRGVQGERG 244
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 29.5 bits (63), Expect = 1.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 141 KAGYAGDDAPRAVFPSIVGRPRHQG 215
KA Y G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z72516-3|CAA96688.2| 1322|Caenorhabditis elegans Hypothetical
protein T25G3.2 protein.
Length = 1322
Score = 27.1 bits (57), Expect = 5.8
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Frame = -1
Query: 173 ARSIISCVTGLAH---TGAMIYYQRGNFFVAH 87
A+S I C G H G M++YQ+ + +AH
Sbjct: 677 AKSDIGCACGRIHPIGNGIMVWYQKFEYAIAH 708
>AY874871-1|AAX62732.1| 1322|Caenorhabditis elegans chitin synthase
1 protein.
Length = 1322
Score = 27.1 bits (57), Expect = 5.8
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Frame = -1
Query: 173 ARSIISCVTGLAH---TGAMIYYQRGNFFVAH 87
A+S I C G H G M++YQ+ + +AH
Sbjct: 677 AKSDIGCACGRIHPIGNGIMVWYQKFEYAIAH 708
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,758,865
Number of Sequences: 27780
Number of extensions: 244466
Number of successful extensions: 737
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 735
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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