Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00227X
(431 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 121 2e-28
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 121 2e-28
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 120 3e-28
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 120 3e-28
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 120 4e-28
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 120 4e-28
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 120 4e-28
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 120 4e-28
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 120 4e-28
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 111 2e-25
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 105 1e-23
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 99 6e-22
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 67 4e-12
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 59 1e-09
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 58 2e-09
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 56 1e-08
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 41 3e-04
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 40 7e-04
At3g12650.1 68416.m01575 expressed protein 30 0.59
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 28 2.4
At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin ... 28 2.4
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 27 4.1
At2g35640.1 68415.m04371 hydroxyproline-rich glycoprotein family... 27 4.1
At2g22450.1 68415.m02662 riboflavin biosynthesis protein, putati... 27 4.1
At3g26260.1 68416.m03276 Ulp1 protease family protein contains P... 27 5.5
At2g29150.1 68415.m03543 tropinone reductase, putative / tropine... 27 5.5
At1g71850.1 68414.m08303 expressed protein ; expression supporte... 27 5.5
At1g43245.1 68414.m04985 expressed protein 26 9.6
At1g16690.2 68414.m01999 transcription factor-related similar to... 26 9.6
At1g16690.1 68414.m01998 transcription factor-related similar to... 26 9.6
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 121 bits (291), Expect = 2e-28
Identities = 54/59 (91%), Positives = 56/59 (94%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIVHGIVTNWDDMEMIWHHTF*NELRVAPEEHPVLLTEAPLNPKA 430
+EAQSKRGILTLKYPI HGIV+NWDDME IWHHTF NELRVAPEEHPVLLTEAPLNPKA
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 116
Score = 96.7 bits (230), Expect = 6e-21
Identities = 43/59 (72%), Positives = 51/59 (86%)
Frame = +3
Query: 96 EEVAALVVDHGSGMCKAGYAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
E++ LV D+G+GM KAG+AGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 121 bits (291), Expect = 2e-28
Identities = 54/59 (91%), Positives = 56/59 (94%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIVHGIVTNWDDMEMIWHHTF*NELRVAPEEHPVLLTEAPLNPKA 430
+EAQSKRGILTLKYPI HGIV+NWDDME IWHHTF NELRVAPEEHPVLLTEAPLNPKA
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 116
Score = 96.7 bits (230), Expect = 6e-21
Identities = 43/59 (72%), Positives = 51/59 (86%)
Frame = +3
Query: 96 EEVAALVVDHGSGMCKAGYAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
E++ LV D+G+GM KAG+AGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 120 bits (290), Expect = 3e-28
Identities = 54/59 (91%), Positives = 55/59 (93%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIVHGIVTNWDDMEMIWHHTF*NELRVAPEEHPVLLTEAPLNPKA 430
+EAQSKRGILTLKYPI HGIV NWDDME IWHHTF NELRVAPEEHPVLLTEAPLNPKA
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 116
Score = 96.7 bits (230), Expect = 6e-21
Identities = 43/59 (72%), Positives = 51/59 (86%)
Frame = +3
Query: 96 EEVAALVVDHGSGMCKAGYAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
E++ LV D+G+GM KAG+AGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 120 bits (290), Expect = 3e-28
Identities = 54/59 (91%), Positives = 55/59 (93%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIVHGIVTNWDDMEMIWHHTF*NELRVAPEEHPVLLTEAPLNPKA 430
+EAQSKRGILTLKYPI HGIV NWDDME IWHHTF NELRVAPEEHPVLLTEAPLNPKA
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 116
Score = 96.7 bits (230), Expect = 6e-21
Identities = 43/59 (72%), Positives = 51/59 (86%)
Frame = +3
Query: 96 EEVAALVVDHGSGMCKAGYAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
E++ LV D+G+GM KAG+AGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 120 bits (289), Expect = 4e-28
Identities = 53/59 (89%), Positives = 55/59 (93%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIVHGIVTNWDDMEMIWHHTF*NELRVAPEEHPVLLTEAPLNPKA 430
+EAQSKRGILTLKYPI HGIV NWDDME IWHHTF NELRVAPEEHP+LLTEAPLNPKA
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKA 116
Score = 96.7 bits (230), Expect = 6e-21
Identities = 43/59 (72%), Positives = 51/59 (86%)
Frame = +3
Query: 96 EEVAALVVDHGSGMCKAGYAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
E++ LV D+G+GM KAG+AGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 120 bits (289), Expect = 4e-28
Identities = 52/59 (88%), Positives = 56/59 (94%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIVHGIVTNWDDMEMIWHHTF*NELRVAPEEHPVLLTEAPLNPKA 430
+EAQSKRGILTLKYPI HG+V+NWDDME IWHHTF NELR+APEEHPVLLTEAPLNPKA
Sbjct: 58 DEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKA 116
Score = 92.3 bits (219), Expect = 1e-19
Identities = 39/59 (66%), Positives = 50/59 (84%)
Frame = +3
Query: 96 EEVAALVVDHGSGMCKAGYAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
+++ +V D+G+GM KAG+AGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVG ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 120 bits (289), Expect = 4e-28
Identities = 52/59 (88%), Positives = 56/59 (94%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIVHGIVTNWDDMEMIWHHTF*NELRVAPEEHPVLLTEAPLNPKA 430
+EAQSKRGILTLKYPI HG+V+NWDDME IWHHTF NELR+APEEHPVLLTEAPLNPKA
Sbjct: 58 DEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKA 116
Score = 92.3 bits (219), Expect = 1e-19
Identities = 39/59 (66%), Positives = 50/59 (84%)
Frame = +3
Query: 96 EEVAALVVDHGSGMCKAGYAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
+++ +V D+G+GM KAG+AGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVG ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 120 bits (289), Expect = 4e-28
Identities = 53/59 (89%), Positives = 55/59 (93%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIVHGIVTNWDDMEMIWHHTF*NELRVAPEEHPVLLTEAPLNPKA 430
+EAQSKRGILTLKYPI HGIV NWDDME IWHHTF NELRVAPEEHP+LLTEAPLNPKA
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKA 116
Score = 96.7 bits (230), Expect = 6e-21
Identities = 43/59 (72%), Positives = 51/59 (86%)
Frame = +3
Query: 96 EEVAALVVDHGSGMCKAGYAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
E++ LV D+G+GM KAG+AGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 120 bits (289), Expect = 4e-28
Identities = 52/59 (88%), Positives = 56/59 (94%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIVHGIVTNWDDMEMIWHHTF*NELRVAPEEHPVLLTEAPLNPKA 430
+EAQSKRGILTLKYPI HG+V+NWDDME IWHHTF NELR+APEEHPVLLTEAPLNPKA
Sbjct: 58 DEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKA 116
Score = 92.3 bits (219), Expect = 1e-19
Identities = 39/59 (66%), Positives = 50/59 (84%)
Frame = +3
Query: 96 EEVAALVVDHGSGMCKAGYAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
+++ +V D+G+GM KAG+AGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVG ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 111 bits (267), Expect = 2e-25
Identities = 46/58 (79%), Positives = 54/58 (93%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIVHGIVTNWDDMEMIWHHTF*NELRVAPEEHPVLLTEAPLNPK 427
+EAQ++RGIL+LKYPI HG+V+NWDDME IWHHTF NELR+ PEEHP+LLTEAPLNPK
Sbjct: 59 DEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPK 116
Score = 91.1 bits (216), Expect = 3e-19
Identities = 39/59 (66%), Positives = 51/59 (86%)
Frame = +3
Query: 96 EEVAALVVDHGSGMCKAGYAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
+E A+V D+G+GM KAG+AGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VG +A+
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 105 bits (253), Expect = 1e-23
Identities = 45/63 (71%), Positives = 55/63 (87%)
Frame = +2
Query: 242 LLCRNEAQSKRGILTLKYPIVHGIVTNWDDMEMIWHHTF*NELRVAPEEHPVLLTEAPLN 421
L ++A+++ GILTL YP+ HG+V+NWDDME IW+HTF +ELRVAPEEHPVLLTEAPLN
Sbjct: 9 LFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLN 68
Query: 422 PKA 430
PKA
Sbjct: 69 PKA 71
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 99 bits (238), Expect = 6e-22
Identities = 48/72 (66%), Positives = 52/72 (72%)
Frame = +2
Query: 215 RDGRYGTEGLLCRNEAQSKRGILTLKYPIVHGIVTNWDDMEMIWHHTF*NELRVAPEEHP 394
RDG E + E + R ILTLK P+ HGIV NWDDME IWH+TF NELRV PEEHP
Sbjct: 35 RDGLNPNESYV-GEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 395 VLLTEAPLNPKA 430
VLLTEAP NPKA
Sbjct: 94 VLLTEAPYNPKA 105
Score = 54.8 bits (126), Expect = 2e-08
Identities = 25/48 (52%), Positives = 33/48 (68%)
Frame = +3
Query: 111 LVVDHGSGMCKAGYAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG 254
+V D G GM +AG+AGD+AP+ VFP +VGRPR G+ +SYVG
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVG 46
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 67.3 bits (157), Expect = 4e-12
Identities = 26/48 (54%), Positives = 35/48 (72%)
Frame = +2
Query: 281 LTLKYPIVHGIVTNWDDMEMIWHHTF*NELRVAPEEHPVLLTEAPLNP 424
L + YP+ +GIV NWDDME +W H F NEL++ P + +LLT+ PLNP
Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNP 113
Score = 45.2 bits (102), Expect = 2e-05
Identities = 21/50 (42%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Frame = +3
Query: 111 LVVDHGSGMCKAGYAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVG 254
+V D+G+G K G+AG++ P +VFP +VGRP R++ ++ KD VG
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVG 56
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 58.8 bits (136), Expect = 1e-09
Identities = 25/34 (73%), Positives = 31/34 (91%)
Frame = +3
Query: 96 EEVAALVVDHGSGMCKAGYAGDDAPRAVFPSIVG 197
+EV+A+VVD GS CKAGYAG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
Score = 54.4 bits (125), Expect = 3e-08
Identities = 23/51 (45%), Positives = 32/51 (62%)
Frame = +2
Query: 269 KRGILTLKYPIVHGIVTNWDDMEMIWHHTF*NELRVAPEEHPVLLTEAPLN 421
+R + + P GIVT+WD ++ +W H F N L + P EHP+LL E PLN
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLN 129
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 58.4 bits (135), Expect = 2e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +3
Query: 96 EEVAALVVDHGSGMCKAGYAGDDAPRAVFPSIVG 197
+EV+A+VVD GS CKAGYAG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 52.8 bits (121), Expect = 1e-07
Identities = 23/51 (45%), Positives = 33/51 (64%)
Frame = +2
Query: 269 KRGILTLKYPIVHGIVTNWDDMEMIWHHTF*NELRVAPEEHPVLLTEAPLN 421
+R + + PI GIV++WD ++ IW H F + L + P EHP+LL E PLN
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLN 135
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 55.6 bits (128), Expect = 1e-08
Identities = 25/46 (54%), Positives = 28/46 (60%)
Frame = +2
Query: 287 LKYPIVHGIVTNWDDMEMIWHHTF*NELRVAPEEHPVLLTEAPLNP 424
L YPI HG V +WD ME W N LR PE+H LLTE+PL P
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTP 131
Score = 32.7 bits (71), Expect = 0.11
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +3
Query: 108 ALVVDHGSGMCKAGYAGDDAPRAVFPSIV 194
A+V+D+G+G K G+AG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 41.1 bits (92), Expect = 3e-04
Identities = 16/34 (47%), Positives = 25/34 (73%)
Frame = +3
Query: 111 LVVDHGSGMCKAGYAGDDAPRAVFPSIVGRPRHQ 212
+V+D+G+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 39.9 bits (89), Expect = 7e-04
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = +2
Query: 287 LKYPIVHGIVTNWDDMEMIWHHTF*NELRVAPEEHPVLLTEAPLN 421
++ PI G + N D IW H F + L +AP +LLTEAPL+
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLS 105
Score = 31.5 bits (68), Expect = 0.25
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 111 LVVDHGSGMCKAGYAGDDAPRAVFPSIVGRP 203
+V+D+G G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12650.1 68416.m01575 expressed protein
Length = 238
Score = 30.3 bits (65), Expect = 0.59
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2
Query: 421 VEGSLSEQDWVFLGGDTQLILEGMMPN 341
+EG E+D LG +T+ +LEGMM N
Sbjct: 99 IEGPTVERDLSALGNETRQVLEGMMKN 125
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 87 MCDEEVAALVVDHGSGMCKAGYAGDDAPRAVFPSIVGRPRHQ 212
+C + L + HG+ G DD RAVF S G+ R Q
Sbjct: 222 LCHLGSSILALGHGTSRISMGETQDDVGRAVFISPTGQNRLQ 263
>At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin
family protein / PAN domain-containing protein contains
Pfam profiles: PF01453 lectin (probable mannose
binding), PF00024 PAN domain
Length = 764
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 96 EEVAALVVDHGSGMCKAGYAGDDAPRAVFPSIVGRPRHQGVM 221
E++ A + ++G G+C A +D + V I GR +GV+
Sbjct: 632 EDLEAKLTEYGFGLCAADKDVEDFGKTVLALITGRYEPEGVV 673
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 108 ALVVDHGSGMCKAGYA-GDDAPRAVFPSIVGR 200
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At2g35640.1 68415.m04371 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 340
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 351 IPSRMSCVSPPRNTQSCSLRLPSTPRP 431
IP+ + PP QS SL LPS P+P
Sbjct: 187 IPTTIVLSLPPPPPQSLSLSLPSPPQP 213
>At2g22450.1 68415.m02662 riboflavin biosynthesis protein, putative
similar to SP|P50855 Riboflavin biosynthesis protein
ribA [Includes: GTP cyclohydrolase II (EC 3.5.4.25);
3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP
synthase)] {Actinobacillus pleuropneumoniae}; contains
Pfam profiles PF00925: GTP cyclohydrolase II, PF00926:
3,4-dihydroxy-2-butanone 4-phosphate synthase
Length = 476
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 99 EVAALVVDHGSGMCKAGYAGDDAPRAVFPSIVGR 200
E A VV HG+G+ G+D R P +V R
Sbjct: 146 EAMAFVVKHGTGIVCVSMKGEDLERLELPLMVTR 179
>At3g26260.1 68416.m03276 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 989
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -2
Query: 382 GGDTQLILEGMMPNHLHVIPVSDDSVYDGVF 290
GG+ +L L+ ++ N + +P++D Y GVF
Sbjct: 924 GGEKKLRLKAVVVNRENEVPLADAVQYSGVF 954
>At2g29150.1 68415.m03543 tropinone reductase, putative / tropine
dehydrogenase, putative similar to tropinone reductase
SP:P50165 from [Datura stramonium]
Length = 268
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -1
Query: 221 HHALMAGPSHDRGEHGARSIISCVTGLAHTGAMIY 117
H + +A P G+ +S V GL HTGA IY
Sbjct: 133 HLSQIAHPLLKASGSGSIVFMSSVAGLVHTGASIY 167
>At1g71850.1 68414.m08303 expressed protein ; expression supported
by MPSS
Length = 470
Score = 27.1 bits (57), Expect = 5.5
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +2
Query: 185 LDRGKAPPSGRDGR--YGTEGLLCRNEAQSKRGILTLK 292
L+RG+ S R GR +G G R++AQS+R ++LK
Sbjct: 426 LERGRRNSSPRSGRRSFGNSG--SRDKAQSRRSKISLK 461
>At1g43245.1 68414.m04985 expressed protein
Length = 558
Score = 26.2 bits (55), Expect = 9.6
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -1
Query: 266 SVPHSYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCV 150
S PH +L T+HH LMA PS H A + I+ V
Sbjct: 96 SSPHRLNNLL---TNHHLLMADPSISVAIHHAANFIATV 131
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 26.2 bits (55), Expect = 9.6
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = +2
Query: 281 LTLKYPIVHGIVTNWDDMEMIWHHTF*NELRVAP 382
L++KY + H I + W + IW L+ P
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 26.2 bits (55), Expect = 9.6
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = +2
Query: 281 LTLKYPIVHGIVTNWDDMEMIWHHTF*NELRVAP 382
L++KY + H I + W + IW L+ P
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,255,304
Number of Sequences: 28952
Number of extensions: 235009
Number of successful extensions: 548
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 548
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 685039728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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