Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00225X
         (438 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   2.9  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   3.9  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   3.9  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   5.1  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    20   9.0  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        20   9.0  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    20   9.0  

>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -1

Query: 384 CNWKCRCRPQTRRGSCWVFAFPRCGP 307
           CN K  C+ ++   SC V   P   P
Sbjct: 135 CNGKPDCKDESDENSCTVETDPNRAP 160


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
 Frame = -1

Query: 384 CNWKCRCRPQTRRGSCWVFAFPR----CGPY*RAQTVRSHCSSEGSLYLVKVSHFSFSPV 217
           CN K  C+ ++   SC V   P     C P  +       CS++G+    ++   +   +
Sbjct: 128 CNGKPDCKDESDENSCTVETDPNRALDCDPT-QCVLPDCFCSADGTRIPGQLEPANVPQM 186

Query: 216 IDMVYQPSVDRD 181
           I + +  +V+ D
Sbjct: 187 ITLTFNGAVNVD 198


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 328 KYPTGSPSCLWTTATLPVTSETTASKLLPSAR 423
           K P G+PS   T ++LP T  T+ S    S+R
Sbjct: 69  KSPQGAPSPSSTPSSLP-TQRTSTSNPTYSSR 99


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 179 FTRWYIPK*GIGEYA 135
           F+ W I + GIG YA
Sbjct: 28  FSNWAIYRPGIGRYA 42


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = -1

Query: 177 HEVVHTEVGYW 145
           H V+++ VG+W
Sbjct: 453 HRVIYSTVGHW 463


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -2

Query: 287 FVHIVAPREASILSRLVTFPSPQ*STWCTSPLSIGI 180
           F  +  P   S+++ L   P P  ST    PL+  I
Sbjct: 307 FNSVATPTPTSVMTELYPSPVPGHSTSPNLPLTHNI 342


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +1

Query: 196 GLVHHVDYWGEGKVTNLDKIEA 261
           G +  +D WG+ +  N  ++EA
Sbjct: 67  GTLQMIDEWGDIEKGNFAEVEA 88


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.316    0.130    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,627
Number of Sequences: 336
Number of extensions: 2140
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9775509
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)