Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00225X
         (438 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81460-2|CAB03831.1|  439|Caenorhabditis elegans Hypothetical pr...    30   0.85 
AL132904-6|CAD91706.2|  326|Caenorhabditis elegans Hypothetical ...    29   1.1  
U40414-2|AAA81405.2|  634|Caenorhabditis elegans Hypothetical pr...    27   4.5  
U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical pr...    27   6.0  
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote...    27   6.0  
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote...    27   6.0  
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote...    27   6.0  
AF068714-9|AAC17810.1|   87|Caenorhabditis elegans Hypothetical ...    27   6.0  
U39849-1|AAA81045.2|  332|Caenorhabditis elegans Serpentine rece...    27   7.9  

>Z81460-2|CAB03831.1|  439|Caenorhabditis elegans Hypothetical
           protein C04A11.2 protein.
          Length = 439

 Score = 29.9 bits (64), Expect = 0.85
 Identities = 17/45 (37%), Positives = 29/45 (64%)
 Frame = +1

Query: 289 SLRSSVRATTRESKYPTGSPSCLWTTATLPVTSETTASKLLPSAR 423
           S R+S RA +  ++ PTG+P+   T    PVT+ T++S + P+A+
Sbjct: 169 SARTSTRAASG-NRTPTGTPNM--TRNVRPVTNRTSSSNVSPAAQ 210


>AL132904-6|CAD91706.2|  326|Caenorhabditis elegans Hypothetical
           protein Y111B2A.9b protein.
          Length = 326

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +3

Query: 138 VLPNTLLRYVPPREDPDRQRAGTPCRLL 221
           V P+ L+   PP  DP  QR+GTP  LL
Sbjct: 4   VSPSNLVFPPPPSPDPYTQRSGTPSALL 31


>U40414-2|AAA81405.2|  634|Caenorhabditis elegans Hypothetical
           protein F53B3.2 protein.
          Length = 634

 Score = 27.5 bits (58), Expect = 4.5
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 313 TTRESKYPTGSPSCLWTTATLPVTSETT 396
           TT   +Y T SP+   TT+T P T+ +T
Sbjct: 196 TTERVRYATFSPNIPMTTSTTPTTTTST 223


>U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical
           protein C12D12.1c protein.
          Length = 825

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = +1

Query: 283 TNSLRSSVRATTRESKYPTGSPSCLWTTATLPVTSETTASKLLPSA 420
           TNS+  S   TT      TGSP+   T  T PVT  T  S    +A
Sbjct: 568 TNSVTPSTGTTTVPVPTTTGSPT---TQTTAPVTKPTVPSSTTQTA 610


>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
            protein.
          Length = 10578

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +1

Query: 298  SSVRATTRESKYPTGSPSCLWTTATLPVTSETTASKLLPSARGRSLS 438
            S+ R +TR S   T   S   T  T+  + +T  + + P  +GRSLS
Sbjct: 2313 STPRGSTRSSNLTTSQDSQATTKMTVS-SEDTIEAPIAPPRKGRSLS 2358


>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
            protein.
          Length = 18519

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +1

Query: 298  SSVRATTRESKYPTGSPSCLWTTATLPVTSETTASKLLPSARGRSLS 438
            S+ R +TR S   T   S   T  T+  + +T  + + P  +GRSLS
Sbjct: 2313 STPRGSTRSSNLTTSQDSQATTKMTVS-SEDTIEAPIAPPRKGRSLS 2358


>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
            protein.
          Length = 18534

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +1

Query: 298  SSVRATTRESKYPTGSPSCLWTTATLPVTSETTASKLLPSARGRSLS 438
            S+ R +TR S   T   S   T  T+  + +T  + + P  +GRSLS
Sbjct: 2313 STPRGSTRSSNLTTSQDSQATTKMTVS-SEDTIEAPIAPPRKGRSLS 2358


>AF068714-9|AAC17810.1|   87|Caenorhabditis elegans Hypothetical
           protein B0348.1 protein.
          Length = 87

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 4/22 (18%)
 Frame = -1

Query: 375 KCRC----RPQTRRGSCWVFAF 322
           KC+C    R ++RRG+CW  AF
Sbjct: 25  KCQCNHTTRMESRRGNCWWIAF 46


>U39849-1|AAA81045.2|  332|Caenorhabditis elegans Serpentine
           receptor, class h protein39 protein.
          Length = 332

 Score = 26.6 bits (56), Expect = 7.9
 Identities = 18/52 (34%), Positives = 29/52 (55%)
 Frame = +1

Query: 124 DLLYAYSPIPYFGMYHLVKIPIDRGLVHHVDYWGEGKVTNLDKIEASLGATM 279
           DL+Y++  IPYF +  LV +P+  GL   +    E ++  L  I A LG+ +
Sbjct: 64  DLMYSFLLIPYFFIPTLVVLPV--GLFSLIGLKTEIQLVVLVIIIAGLGSAV 113


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.316    0.130    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,602,614
Number of Sequences: 27780
Number of extensions: 194071
Number of successful extensions: 414
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 414
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 745968860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)