Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00225X
         (438 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g19680.1 68414.m02453 expressed protein                             30   0.59 
At3g29590.1 68416.m03718 transferase family protein similar to a...    28   2.4  
At3g51540.1 68416.m05644 expressed protein mucin 5AC, Homo sapie...    28   3.2  
At3g07100.1 68416.m00845 protein transport protein Sec24, putati...    27   4.2  
At3g54210.1 68416.m05992 ribosomal protein L17 family protein co...    27   7.3  
At5g39090.1 68418.m04729 transferase family protein similar to a...    26   9.7  

>At1g19680.1 68414.m02453 expressed protein
          Length = 444

 Score = 30.3 bits (65), Expect = 0.59
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +3

Query: 141 LPNTLLRYVPPREDPDRQRAGTPCRLLGRRKSD*P*QDRGFPRSYNVNE 287
           LP+     +PPR  P R+  G+P + L R+ SD        P +Y+ +E
Sbjct: 148 LPSAHTHSLPPRSTPSRRARGSPGQQLFRQVSDSQTLGLKSPNNYSTSE 196


>At3g29590.1 68416.m03718 transferase family protein similar to
           anthocyanin 5-aromatic acyltransferase from Gentiana
           triflora GI:4185599, malonyl CoA:anthocyanin
           5-O-glucoside-6'''-O-malonyltransferase from Perilla
           frutescens GI:17980232, Salvia splendens GI:17980234;
           contains Pfam profile PF02458 transferase family
          Length = 449

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = +1

Query: 145 PIPYFGMYHLVKIPIDRGLVHHVDYWGEGKVTNLDKIEASLGATM 279
           P+ YF +  L   P+DR L +HV       +  + K+++SL AT+
Sbjct: 27  PLTYFDLGWLKLHPVDRVLFYHVPELTRSSL--ISKLKSSLSATL 69


>At3g51540.1 68416.m05644 expressed protein mucin 5AC, Homo sapiens,
           PIR:S53363
          Length = 438

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
 Frame = +1

Query: 232 KVTNLDKIEASLGATM*TNSLRSSVRATTRESKYPTGSPSCLWTTATLPVTSETTASKLL 411
           K T   +I+AS   +    ++  S+  ++R++  PT +PS + TT     TS T + K  
Sbjct: 135 KKTTTTQIQASASVSSPKRTVSRSLTPSSRKTPSPTSTPSRISTT-----TSTTPSFKTA 189

Query: 412 PSA-RGRSLS 438
             A R RSL+
Sbjct: 190 GDAQRSRSLT 199


>At3g07100.1 68416.m00845 protein transport protein Sec24, putative
            similar to protein transport protein Sec24A
            (SEC24-related protein) [Homo sapiens] SWISS-PROT:O95486
          Length = 1038

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 13/50 (26%), Positives = 21/50 (42%)
 Frame = +3

Query: 261  FPRSYNVNEQFALVSKGHNEGKQIPNRIPXXXXXXXXXXXYIRDDSVKTV 410
            +P  + V+E     S  H++ K +  R+P           YI DD  + V
Sbjct: 887  YPNLFRVDEWLLKPSAAHDDFKDVLRRLPLAAESLDSRGLYIYDDGFRLV 936


>At3g54210.1 68416.m05992 ribosomal protein L17 family protein
           contains Pfam profile: PF01196 ribosomal protein L17
          Length = 211

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 334 PTGSPSCLWTTATLPVTSETTASKLLPSARGR 429
           PT S S +W+ ++L     +TAS  LPS+  R
Sbjct: 12  PTDSVSRVWSMSSLKSALPSTASLRLPSSSSR 43


>At5g39090.1 68418.m04729 transferase family protein similar to
           anthocyanin 5-aromatic acyltransferase from Gentiana
           triflora GI:4185599, malonyl CoA:anthocyanin
           5-O-glucoside-6'''-O-malonyltransferase from Perilla
           frutescens GI:17980232, Salvia splendens GI:17980234;
           contains Pfam profile PF02458 transferase family
          Length = 448

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 2/21 (9%)
 Frame = +1

Query: 145 PIPYFG--MYHLVKIPIDRGL 201
           P+ YFG  +Y  VKIP+D G+
Sbjct: 313 PLTYFGNCVYSAVKIPLDAGM 333


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.316    0.130    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,142,702
Number of Sequences: 28952
Number of extensions: 184637
Number of successful extensions: 443
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 443
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 692941200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)