Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00224
         (662 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    25   0.85 
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   3.4  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   4.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   4.5  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          22   4.5  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    21   7.9  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 13/52 (25%), Positives = 27/52 (51%)
 Frame = -3

Query: 477 ITILLEVFPDWLPKVSIWLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLV 322
           +++L  +FP  + K  +WL  ++ + T+P+ T L S     T +     P++
Sbjct: 461 VSLLHLIFPPDIAK-RLWLGETIEAKTYPEVTMLFSDIVGFTEICSTATPMM 511


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = -3

Query: 489 PQSLITILLE--VFPDWLPKVSIWLTTS 412
           P  ++  LL+   FP WL  +++WL  S
Sbjct: 638 PSHIMAGLLDKFFFPKWLQVLALWLNHS 665


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = +3

Query: 138 GFGYKGSIFHRVIPN 182
           GFGY+ ++ ++V+P+
Sbjct: 389 GFGYESNVKYQVVPS 403


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = +3

Query: 138 GFGYKGSIFHRVIPN 182
           GFGY+ ++ ++V+P+
Sbjct: 389 GFGYESNVKYQVVPS 403


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = +3

Query: 138 GFGYKGSIFHRVIPN 182
           GFGY+ ++ ++V+P+
Sbjct: 15  GFGYESNVKYQVVPS 29


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 226 PVPLWLVNSPPCSMK 182
           PVP++  N PP SM+
Sbjct: 366 PVPIYCGNFPPRSME 380


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,045
Number of Sequences: 438
Number of extensions: 4769
Number of successful extensions: 20
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19977660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)