Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00223
         (839 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    26   1.2  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    26   1.2  
AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse t...    24   5.0  
AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease pr...    24   6.6  

>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -3

Query: 291 LSNMLGSSGCSPTQVITNVGFFGKGSTTCTCS 196
           LS++   S    T V+++   +GKGST+ T S
Sbjct: 614 LSSITSFSSSGNTTVVSDYDVYGKGSTSTTTS 645


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -3

Query: 291 LSNMLGSSGCSPTQVITNVGFFGKGSTTCTCS 196
           LS++   S    T V+++   +GKGST+ T S
Sbjct: 615 LSSITSFSSSGNTTVVSDYDVYGKGSTSTTTS 646


>AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 134

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 6/29 (20%)
 Frame = -2

Query: 436 PPHGLNVLNS------NRLHILNSSSVNY 368
           P + +N++NS      N++HILNS+S  Y
Sbjct: 96  PSYLINIVNSFISNRQNKVHILNSTSSTY 124


>AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease
           protein.
          Length = 364

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3

Query: 213 TTCTCSPIFSASFLRKLMHS 154
           T  TC P+ + S++RK++ S
Sbjct: 37  TAGTCEPVKNCSYVRKILKS 56


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 910,101
Number of Sequences: 2352
Number of extensions: 19834
Number of successful extensions: 32
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88891965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)