Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00223
(839 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68214-3|CAA92445.1| 399|Caenorhabditis elegans Hypothetical pr... 133 2e-31
Z68214-5|CAA92446.2| 397|Caenorhabditis elegans Hypothetical pr... 131 5e-31
U41012-2|AAV28364.1| 411|Caenorhabditis elegans Hypothetical pr... 131 7e-31
U41012-1|AAA82294.3| 397|Caenorhabditis elegans Hypothetical pr... 131 7e-31
Z68214-4|CAA92447.1| 397|Caenorhabditis elegans Hypothetical pr... 130 9e-31
Z93386-5|CAB07646.1| 473|Caenorhabditis elegans Hypothetical pr... 45 8e-05
AC024859-4|AAK29983.4| 472|Caenorhabditis elegans Hypothetical ... 40 0.002
Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical pr... 38 0.007
U39647-1|AAA80375.2| 351|Caenorhabditis elegans Hypothetical pr... 36 0.036
U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore co... 29 3.1
U41007-19|AAA82274.1| 432|Caenorhabditis elegans Hypothetical p... 29 4.1
AF078785-3|AAC27091.2| 481|Caenorhabditis elegans Hypothetical ... 29 5.4
AC084154-6|AAO91684.1| 319|Caenorhabditis elegans Serpentine re... 29 5.4
AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione ... 29 5.4
Z83217-4|CAB05683.2| 1178|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z81593-11|CAI94505.2| 360|Caenorhabditis elegans Hypothetical p... 28 7.2
Z70781-3|CAA94833.2| 352|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z29560-9|CAA82661.3| 148|Caenorhabditis elegans Hypothetical pr... 28 7.2
AF002198-4|AAF99939.4| 339|Caenorhabditis elegans Hypothetical ... 28 7.2
U40946-3|AAO91681.1| 851|Caenorhabditis elegans Hypothetical pr... 28 9.5
AL021572-1|CAA16516.2| 654|Caenorhabditis elegans Hypothetical ... 28 9.5
>Z68214-3|CAA92445.1| 399|Caenorhabditis elegans Hypothetical
protein C10C5.3 protein.
Length = 399
Score = 133 bits (321), Expect = 2e-31
Identities = 66/142 (46%), Positives = 93/142 (65%), Gaps = 2/142 (1%)
Frame = +2
Query: 92 SVSTLQNYIRIRSVHPNVDYNECINFLKNEAEKIGLQVQVVEPLPKKPTLVMTWVGEQPE 271
+V+ + Y+R+ + PN DY C +FL A+++G+ + E +P ++MT G QPE
Sbjct: 7 AVTRFREYLRVNTEQPNPDYAACRDFLFKYADELGIARRSFETVPGAIFVIMTIPGSQPE 66
Query: 272 LPSILLNSHMDVVPVFENSWKHPPFAA-EIEDNVIYARGVQDMKSVGIQYIEAVRRLKET 448
LPSI+L SH DVVP F W H P++A + ED I+ARG QDMK VG+Q +EA+R L
Sbjct: 67 LPSIMLYSHTDVVPTFREHWTHDPYSAFKDEDGNIFARGAQDMKCVGVQQMEALRNLFAQ 126
Query: 449 GVK-LKRTVHLSFVPDEEIGGI 511
G++ KRT+HL + PDEEI GI
Sbjct: 127 GIRQWKRTIHLVWGPDEEIFGI 148
Score = 78.6 bits (185), Expect = 5e-15
Identities = 39/78 (50%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Frame = +1
Query: 514 GMGKFVQTDVFKNMNVGFALDEGVASPNDDYLVFNGERIIWHVKITCPGKSGHGSLLLPD 693
GM F +TD FK +N+GF+LDEG+ S +D Y VF ER+ W VK+T PG GHGS + +
Sbjct: 150 GMKGFAKTDEFKKLNLGFSLDEGMPSDDDVYKVFYAERVAWWVKVTFPGNPGHGSQFMEN 209
Query: 694 NCGEKL-RYIID--KFMD 738
EKL RY+ KF D
Sbjct: 210 TAMEKLERYLASARKFRD 227
Score = 36.7 bits (81), Expect = 0.021
Identities = 13/22 (59%), Positives = 20/22 (90%)
Frame = +3
Query: 771 NPQLTIGDVTSVNLTMISGGIQ 836
NP LTIGDVT++N+ +++GG+Q
Sbjct: 236 NPDLTIGDVTTLNVNIVNGGVQ 257
>Z68214-5|CAA92446.2| 397|Caenorhabditis elegans Hypothetical
protein C10C5.5 protein.
Length = 397
Score = 131 bits (317), Expect = 5e-31
Identities = 65/142 (45%), Positives = 93/142 (65%), Gaps = 2/142 (1%)
Frame = +2
Query: 92 SVSTLQNYIRIRSVHPNVDYNECINFLKNEAEKIGLQVQVVEPLPKKPTLVMTWVGEQPE 271
+V+ + Y+R+ + PN +Y C +FL A+++G+ + +E P ++MT G QPE
Sbjct: 7 AVTRFREYLRVNTEQPNPNYAACRDFLFKYADELGIARRSIETAPGVFLVIMTIPGSQPE 66
Query: 272 LPSILLNSHMDVVPVFENSWKHPPFAA-EIEDNVIYARGVQDMKSVGIQYIEAVRRLKET 448
LPSI+L SH DVVP F W H P++A + ED I+ARG QDMK VG+Q +EA+R L
Sbjct: 67 LPSIMLYSHTDVVPTFREHWTHDPYSAFKDEDGNIFARGAQDMKCVGVQQMEALRNLFAQ 126
Query: 449 GVK-LKRTVHLSFVPDEEIGGI 511
G++ KRT+HL + PDEEI GI
Sbjct: 127 GIRQWKRTIHLVWGPDEEIFGI 148
Score = 78.2 bits (184), Expect = 7e-15
Identities = 36/79 (45%), Positives = 47/79 (59%)
Frame = +1
Query: 514 GMGKFVQTDVFKNMNVGFALDEGVASPNDDYLVFNGERIIWHVKITCPGKSGHGSLLLPD 693
GM F +TD FK +N+GF+LDEG+ S +D Y VF ER+ W VK+T PG GHGS + +
Sbjct: 150 GMKGFAKTDEFKKLNLGFSLDEGMPSDDDVYKVFYAERVAWWVKVTFPGNPGHGSQFMEN 209
Query: 694 NCGEKLRYIIDKFMDLRQE 750
EKL + R E
Sbjct: 210 TAMEKLERFLASARKFRNE 228
Score = 35.9 bits (79), Expect = 0.036
Identities = 12/22 (54%), Positives = 20/22 (90%)
Frame = +3
Query: 771 NPQLTIGDVTSVNLTMISGGIQ 836
NP LT+GDVT++N+ +++GG+Q
Sbjct: 236 NPNLTLGDVTTLNVNIVNGGVQ 257
>U41012-2|AAV28364.1| 411|Caenorhabditis elegans Hypothetical
protein C06A6.4b protein.
Length = 411
Score = 131 bits (316), Expect = 7e-31
Identities = 65/144 (45%), Positives = 92/144 (63%), Gaps = 2/144 (1%)
Frame = +2
Query: 86 DPSVSTLQNYIRIRSVHPNVDYNECINFLKNEAEKIGLQVQVVEPLPKKPTLVMTWVGEQ 265
D V+ + Y+R+ + P DY C +FL A+++G++ + VE P ++MT G +
Sbjct: 4 DIGVTRFREYLRVNTEQPKPDYEACRDFLFKYADELGIERRSVETAPGTYFVIMTIPGSK 63
Query: 266 PELPSILLNSHMDVVPVFENSWKHPPFAA-EIEDNVIYARGVQDMKSVGIQYIEAVRRLK 442
P+LPSI+L SH DVVP F W H P++A + ED I+ARG QDMK VG+QY+EA+R
Sbjct: 64 PDLPSIMLYSHTDVVPTFREYWTHDPYSAFKDEDGNIFARGAQDMKCVGVQYMEALRNWF 123
Query: 443 ETGVK-LKRTVHLSFVPDEEIGGI 511
GVK RT+H+ + PDEEIG I
Sbjct: 124 AKGVKQWTRTIHIVWGPDEEIGHI 147
Score = 77.8 bits (183), Expect = 9e-15
Identities = 39/88 (44%), Positives = 50/88 (56%)
Frame = +1
Query: 514 GMGKFVQTDVFKNMNVGFALDEGVASPNDDYLVFNGERIIWHVKITCPGKSGHGSLLLPD 693
GM F T+ FK +N+ FALDEG+A+ +D Y +F ERI W VK+T PG GHGS +
Sbjct: 149 GMKGFAVTEEFKKLNIDFALDEGIATEDDVYKIFYAERIPWWVKVTLPGHPGHGSKFIEK 208
Query: 694 NCGEKLRYIIDKFMDLRQESVKKWLTTH 777
EKL +I + R E K L H
Sbjct: 209 TAIEKLHKLIASVDEFRNEQ-KSLLAEH 235
Score = 37.1 bits (82), Expect = 0.016
Identities = 13/25 (52%), Positives = 23/25 (92%)
Frame = +3
Query: 762 VADNPQLTIGDVTSVNLTMISGGIQ 836
+A++P+ T+GDVT+ N+T+I+GG+Q
Sbjct: 232 LAEHPEWTVGDVTTSNITIINGGVQ 256
>U41012-1|AAA82294.3| 397|Caenorhabditis elegans Hypothetical
protein C06A6.4a protein.
Length = 397
Score = 131 bits (316), Expect = 7e-31
Identities = 65/144 (45%), Positives = 92/144 (63%), Gaps = 2/144 (1%)
Frame = +2
Query: 86 DPSVSTLQNYIRIRSVHPNVDYNECINFLKNEAEKIGLQVQVVEPLPKKPTLVMTWVGEQ 265
D V+ + Y+R+ + P DY C +FL A+++G++ + VE P ++MT G +
Sbjct: 4 DIGVTRFREYLRVNTEQPKPDYEACRDFLFKYADELGIERRSVETAPGTYFVIMTIPGSK 63
Query: 266 PELPSILLNSHMDVVPVFENSWKHPPFAA-EIEDNVIYARGVQDMKSVGIQYIEAVRRLK 442
P+LPSI+L SH DVVP F W H P++A + ED I+ARG QDMK VG+QY+EA+R
Sbjct: 64 PDLPSIMLYSHTDVVPTFREYWTHDPYSAFKDEDGNIFARGAQDMKCVGVQYMEALRNWF 123
Query: 443 ETGVK-LKRTVHLSFVPDEEIGGI 511
GVK RT+H+ + PDEEIG I
Sbjct: 124 AKGVKQWTRTIHIVWGPDEEIGHI 147
Score = 77.8 bits (183), Expect = 9e-15
Identities = 39/88 (44%), Positives = 50/88 (56%)
Frame = +1
Query: 514 GMGKFVQTDVFKNMNVGFALDEGVASPNDDYLVFNGERIIWHVKITCPGKSGHGSLLLPD 693
GM F T+ FK +N+ FALDEG+A+ +D Y +F ERI W VK+T PG GHGS +
Sbjct: 149 GMKGFAVTEEFKKLNIDFALDEGIATEDDVYKIFYAERIPWWVKVTLPGHPGHGSKFIEK 208
Query: 694 NCGEKLRYIIDKFMDLRQESVKKWLTTH 777
EKL +I + R E K L H
Sbjct: 209 TAIEKLHKLIASVDEFRNEQ-KSLLAEH 235
Score = 37.1 bits (82), Expect = 0.016
Identities = 13/25 (52%), Positives = 23/25 (92%)
Frame = +3
Query: 762 VADNPQLTIGDVTSVNLTMISGGIQ 836
+A++P+ T+GDVT+ N+T+I+GG+Q
Sbjct: 232 LAEHPEWTVGDVTTSNITIINGGVQ 256
>Z68214-4|CAA92447.1| 397|Caenorhabditis elegans Hypothetical
protein C10C5.4 protein.
Length = 397
Score = 130 bits (315), Expect = 9e-31
Identities = 64/142 (45%), Positives = 91/142 (64%), Gaps = 2/142 (1%)
Frame = +2
Query: 92 SVSTLQNYIRIRSVHPNVDYNECINFLKNEAEKIGLQVQVVEPLPKKPTLVMTWVGEQPE 271
+V+ + Y+R+ + PN DY C +FL A+++G++ + VE P ++MT G QPE
Sbjct: 7 AVTRFREYLRVNTEQPNPDYVACRDFLFKYADEVGIERKAVETAPGVYFVIMTIPGSQPE 66
Query: 272 LPSILLNSHMDVVPVFENSWKHPPFAA-EIEDNVIYARGVQDMKSVGIQYIEAVRRLKET 448
LPSI+L SH DVVP F W H P++A + ED I+ARG QD K +G+Q++EA R L
Sbjct: 67 LPSIMLYSHTDVVPTFREHWTHDPYSAFKDEDGNIFARGAQDTKCLGVQHVEAFRNLFAK 126
Query: 449 GVK-LKRTVHLSFVPDEEIGGI 511
G K KRT+H+ + PDEE G I
Sbjct: 127 GAKQWKRTIHVVWGPDEETGHI 148
Score = 77.8 bits (183), Expect = 9e-15
Identities = 35/79 (44%), Positives = 47/79 (59%)
Frame = +1
Query: 514 GMGKFVQTDVFKNMNVGFALDEGVASPNDDYLVFNGERIIWHVKITCPGKSGHGSLLLPD 693
GM FV+T+ FK +N+GF+LDEG AS N YL F ER+ W +K+T PG GHGS + +
Sbjct: 150 GMKGFVETNEFKKLNIGFSLDEGHASENGVYLTFYAERVTWWLKVTAPGNPGHGSQFMEN 209
Query: 694 NCGEKLRYIIDKFMDLRQE 750
EK+ + R E
Sbjct: 210 TAMEKIERFLASARAFRNE 228
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +3
Query: 771 NPQLTIGDVTSVNLTMISGGIQ 836
NP +GDVT++N+ ++ GG+Q
Sbjct: 236 NPTWALGDVTTLNVNILKGGVQ 257
>Z93386-5|CAB07646.1| 473|Caenorhabditis elegans Hypothetical
protein R11H6.1 protein.
Length = 473
Score = 44.8 bits (101), Expect = 8e-05
Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 1/131 (0%)
Frame = +2
Query: 122 IRSVHPNVDYNECINFLKNEAEKIGLQVQVVEPLPKKPTLVMTWVGEQPELPSILLNSHM 301
IR VH + E I + A+ +G Q ++ K P +++ +G ++L+ H+
Sbjct: 43 IRMVHWMKEKLETIGTICELAD-LGTQ-ELEGKTVKLPPVLLGTLGSDKNKKTLLVYGHL 100
Query: 302 DVVPVFENS-WKHPPFAAEIEDNVIYARGVQDMKSVGIQYIEAVRRLKETGVKLKRTVHL 478
DV P ++ W PF +D ++ RG D K + + A+R ++ G+ L +
Sbjct: 101 DVQPAAKSDGWDTEPFELVEKDGKLFGRGSSDDKGPVLCWFHAIRAAQKNGIDLPVNIKF 160
Query: 479 SFVPDEEIGGI 511
EE G +
Sbjct: 161 CLEGMEESGSV 171
>AC024859-4|AAK29983.4| 472|Caenorhabditis elegans Hypothetical
protein Y71H2AM.11 protein.
Length = 472
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +2
Query: 215 EPLPKKPTLVMTWVGEQPELPSILLNSHMDVVPVF-ENSWKHPPFAAEIEDNVIYARGVQ 391
E LP P + + G ++L+ H+DV P E+ W PF D ++ RG
Sbjct: 73 EQLPLPPAVFGVY-GRDKSKKTLLIYGHLDVQPAEKEDGWNTNPFELTEIDGKLFGRGST 131
Query: 392 DMKSVGIQYIEAVRRLKETGVKLKRTVHLSFV 487
D K I +I ++ L+ G+ L +++ FV
Sbjct: 132 DDKGPVIAWIAVLKVLQTLGIDL--PINIKFV 161
>Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical
protein F40F12.5 protein.
Length = 1144
Score = 38.3 bits (85), Expect = 0.007
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Frame = +2
Query: 20 DCTPFCLISAMLRIHTTSSVKIDPSVSTLQNYIRIR-SVHPNVDYNECINFLKNEAEKIG 196
DCTP LI AM+ + D ++ L + R V+ N ++ NF+ N
Sbjct: 190 DCTP--LICAMITRSDVMRINQDQAIHLLAVSVEKRIEVYQNFEW---FNFILNLKIGDS 244
Query: 197 LQVQVVEPLPKKPTLVMTWVGEQPELPSILLNSHMD 304
+ V+V E + + P V +W+GE+PE I N D
Sbjct: 245 VSVEVDETMRRVPAKV-SWIGERPEASGIWYNVDFD 279
>U39647-1|AAA80375.2| 351|Caenorhabditis elegans Hypothetical
protein C44E12.1 protein.
Length = 351
Score = 35.9 bits (79), Expect = 0.036
Identities = 28/98 (28%), Positives = 42/98 (42%)
Frame = +2
Query: 218 PLPKKPTLVMTWVGEQPELPSILLNSHMDVVPVFENSWKHPPFAAEIEDNVIYARGVQDM 397
P + + T+ P+ +LLN+H+D VP + PP + E N IY G D
Sbjct: 50 PNSDRYNIYATFRNSDPKHVKVLLNTHLDTVPPY-----FPP--TQDEQN-IYGNGSNDA 101
Query: 398 KSVGIQYIEAVRRLKETGVKLKRTVHLSFVPDEEIGGI 511
K + A + +T + R + L FV EE I
Sbjct: 102 KGQLAAMVTAATIISKTDEDVARALGLLFVVGEEFDHI 139
>U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore
complex protein protein11 protein.
Length = 805
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = -3
Query: 354 SAAKGGCFQLFSKTGTTSI*ELSNMLGSSGCSPTQVITNVGFFGKGSTTCTCSPIFSASF 175
S+ GG F + S+ + GSS + T G FG STT T +P + F
Sbjct: 365 SSTTGGLFGSTAAAPAASL-PTGGLFGSSTPAKTPAAPTAGLFGASSTTTTSAPATGSLF 423
>U41007-19|AAA82274.1| 432|Caenorhabditis elegans Hypothetical
protein C33H5.17 protein.
Length = 432
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -3
Query: 648 DFHMPNYSFAIEDQVVIVRGCDALIE 571
D+ +P+YSF +E+ +V+V+G + E
Sbjct: 153 DYQVPDYSFIVEEGLVLVKGMSDIWE 178
>AF078785-3|AAC27091.2| 481|Caenorhabditis elegans Hypothetical
protein C04E12.5 protein.
Length = 481
Score = 28.7 bits (61), Expect = 5.4
Identities = 22/104 (21%), Positives = 45/104 (43%), Gaps = 1/104 (0%)
Frame = +2
Query: 227 KKPTLVMTWVGEQPELPSILLNSHMDVVPVFENSWK-HPPFAAEIEDNVIYARGVQDMKS 403
K T +T QP++ S L H D++ + S + + F ++ N Y++ +D
Sbjct: 293 KSSTTTITETHHQPDISSTRLTEHQDIIQLTPKSGQDYAKFTYDVISNT-YSQSNEDGSP 351
Query: 404 VGIQYIEAVRRLKETGVKLKRTVHLSFVPDEEIGGILEWGSSFR 535
V V + + + + +H+ ++ I G++ W FR
Sbjct: 352 VKPYLASNVEHVVDRRLNV-AYIHMKEPINKRI-GLINWEFDFR 393
>AC084154-6|AAO91684.1| 319|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 64 protein.
Length = 319
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 74 SVKIDPSVSTLQNYIRIRSVHPNVDYNECINF-LKNEAEKIGLQVQVVEPL 223
++K PS L + R++HP++DY +NF ++A+K+ L + L
Sbjct: 145 AIKFIPSPDHLAVHNETRTLHPDLDYTPYLNFGGYSQAQKVFLDRSAIVTL 195
>AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione
s-transferase protein43 protein.
Length = 214
Score = 28.7 bits (61), Expect = 5.4
Identities = 24/105 (22%), Positives = 42/105 (40%)
Frame = +2
Query: 116 IRIRSVHPNVDYNECINFLKNEAEKIGLQVQVVEPLPKKPTLVMTWVGEQPELPSILLNS 295
+RI N+DY L +E K + P K PTLV+ + L
Sbjct: 18 VRIALALKNIDYEYRPIDLFSEESKNNAEFVKHNPAKKVPTLVIN---------GLSLTE 68
Query: 296 HMDVVPVFENSWKHPPFAAEIEDNVIYARGVQDMKSVGIQYIEAV 430
+ ++ + ++ PPF + D Y+R + IQ ++A+
Sbjct: 69 SLAIIEYLDEAYPDPPFLPKELDKRSYSRAIALHIVASIQPLQAI 113
>Z83217-4|CAB05683.2| 1178|Caenorhabditis elegans Hypothetical
protein C10C6.6 protein.
Length = 1178
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 604 YLVFNGERIIWHVKITCPGKSGHGSLLLPD-NC 699
+++F G +I+ H T PGK+ G + PD NC
Sbjct: 331 HVIFGGTKIVQH---TAPGKAAEGMVKSPDGNC 360
>Z81593-11|CAI94505.2| 360|Caenorhabditis elegans Hypothetical
protein T20B3.16 protein.
Length = 360
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +2
Query: 62 HTTSSVKIDPSVSTLQNYIRIRSVHPNVDYNECINFLKNEAEKIG 196
+TTSS D T + Y HPNV EC+ + ++G
Sbjct: 166 NTTSSCIWDKFSGTAEGYDNFAPGHPNVTIGECVT-INTRGSRVG 209
>Z70781-3|CAA94833.2| 352|Caenorhabditis elegans Hypothetical
protein F57A8.5 protein.
Length = 352
Score = 28.3 bits (60), Expect = 7.2
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 174 KMKLKRLDYKCKWSNLC 224
+M +++L Y CKWSN C
Sbjct: 44 RMSVQKLVYNCKWSNNC 60
>Z29560-9|CAA82661.3| 148|Caenorhabditis elegans Hypothetical
protein K03H1.9 protein.
Length = 148
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -2
Query: 322 LEDRHH-VHMRVE*YARQLRLLSYPGHYQRRLLWQRFDH 209
L +HH H+ + +L L +P H+ R++LWQ H
Sbjct: 6 LHHQHHRYHLLLLRLHYRLHRLRHPFHHHRKMLWQMTHH 44
>AF002198-4|AAF99939.4| 339|Caenorhabditis elegans Hypothetical
protein F35F10.4 protein.
Length = 339
Score = 28.3 bits (60), Expect = 7.2
Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 1/104 (0%)
Frame = +2
Query: 227 KKPTLVMTWVGEQPELPSILLNSHMDVVPVFENSWK-HPPFAAEIEDNVIYARGVQDMKS 403
K PT +T QP++ S + H D+V + + K + F +I N Y++ +D
Sbjct: 115 KSPTSTITEPHHQPDISSTRVTEHQDIVQLKPETGKDYAKFTYDIISNT-YSQNFEDGSP 173
Query: 404 VGIQYIEAVRRLKETGVKLKRTVHLSFVPDEEIGGILEWGSSFR 535
V R+ + + +H+ ++ I G + W F+
Sbjct: 174 VKPYLASNAERVVDRRSNV-AYIHMKEPINKRI-GFINWEFDFK 215
>U40946-3|AAO91681.1| 851|Caenorhabditis elegans Hypothetical
protein W05H9.2 protein.
Length = 851
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/58 (22%), Positives = 29/58 (50%)
Frame = +2
Query: 17 RDCTPFCLISAMLRIHTTSSVKIDPSVSTLQNYIRIRSVHPNVDYNECINFLKNEAEK 190
++C ++ ++ ++ V +V Q+Y +I + V +++C+ KN AEK
Sbjct: 58 KNCRDSQRLARFMKPNSFEEVPKFETVDEFQDYFKISILERRVTFDQCLFISKNYAEK 115
>AL021572-1|CAA16516.2| 654|Caenorhabditis elegans Hypothetical
protein W06H3.1 protein.
Length = 654
Score = 27.9 bits (59), Expect = 9.5
Identities = 26/132 (19%), Positives = 58/132 (43%), Gaps = 3/132 (2%)
Frame = +2
Query: 116 IRIRSVHPNVDYNECINFLKNEAEKIGLQVQV-VEPLPKKPTLVMTWVGEQPELPSILLN 292
+ +++VHPN++Y + + K + I + ++ L +K L+ + + E+ + SI+
Sbjct: 293 MELKAVHPNLNYEDGMKIKKADLHTILAHAHLRIDQLSQK--LIDSKLNEEKRIQSIIAK 350
Query: 293 SHMDVVPV--FENSWKHPPFAAEIEDNVIYARGVQDMKSVGIQYIEAVRRLKETGVKLKR 466
D++ E + K E + + A + + +Y E ++ + T +L
Sbjct: 351 KKEDLLEKLRLETNAKQAAVIPEFDKKKLDAELARATAEIQKKYDEKLKEVVRTQKQLYD 410
Query: 467 TVHLSFVPDEEI 502
H V DE +
Sbjct: 411 IEHAKDV-DEAV 421
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,876,682
Number of Sequences: 27780
Number of extensions: 444590
Number of successful extensions: 1395
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1384
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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