Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00222X
(492 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U01833-1|AAA61932.1| 320|Homo sapiens protein ( Human nucleotid... 100 2e-21
BC109323-1|AAI09324.1| 320|Homo sapiens nucleotide binding prot... 100 2e-21
BC109322-1|AAI09323.1| 320|Homo sapiens nucleotide binding prot... 98 2e-20
AK223204-1|BAD96924.1| 320|Homo sapiens nucleotide binding prot... 98 2e-20
BC100290-1|AAI00291.1| 309|Homo sapiens NUBP1 protein protein. 92 1e-18
BC008005-1|AAH08005.1| 271|Homo sapiens nucleotide binding prot... 74 3e-13
BC002768-1|AAH02768.1| 271|Homo sapiens nucleotide binding prot... 74 3e-13
AL031724-1|CAC36077.1| 265|Homo sapiens C447E6.1 (nucleotide bi... 74 3e-13
AK001023-1|BAA91471.1| 271|Homo sapiens protein ( Homo sapiens ... 74 3e-13
AF118394-1|AAD45242.1| 271|Homo sapiens putative nucleotide bin... 74 3e-13
BC024919-1|AAH24919.1| 289|Homo sapiens nucleotide binding prot... 58 2e-08
AK022722-1|BAB14203.1| 289|Homo sapiens protein ( Homo sapiens ... 58 2e-08
BX511262-39|CAM45830.1| 224|Homo sapiens lymphocyte antigen 6 c... 33 0.71
AL805934-41|CAI18529.1| 224|Homo sapiens lymphocyte antigen 6 c... 33 0.71
AL670886-32|CAI17806.1| 224|Homo sapiens lymphocyte antigen 6 c... 33 0.71
AL662899-16|CAI18399.1| 224|Homo sapiens lymphocyte antigen 6 c... 33 0.71
AJ315541-1|CAC85522.1| 224|Homo sapiens LY6G5C, isoform A protein. 33 0.71
BX538093-1|CAD98012.1| 1732|Homo sapiens hypothetical protein pr... 31 2.2
AB082528-1|BAC02706.2| 1685|Homo sapiens KIAA1997 protein protein. 31 2.2
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 30 3.8
AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein. 30 3.8
BC108280-1|AAI08281.1| 896|Homo sapiens echinoderm microtubule ... 30 5.0
AK093146-1|BAC04073.1| 889|Homo sapiens protein ( Homo sapiens ... 30 5.0
U13052-1|AAC50067.1| 296|Homo sapiens kir protein. 29 8.8
U10550-1|AAA64911.1| 296|Homo sapiens Gem protein. 29 8.8
BC022010-1|AAH22010.1| 296|Homo sapiens GTP binding protein ove... 29 8.8
AF144094-1|AAF05903.1| 3530|Homo sapiens unconventional myosin-1... 29 8.8
>U01833-1|AAA61932.1| 320|Homo sapiens protein ( Human
nucleotide-binding protein mRNA, complete cds. ).
Length = 320
Score = 100 bits (240), Expect = 2e-21
Identities = 44/77 (57%), Positives = 59/77 (76%)
Frame = +2
Query: 260 PDPAVELIKQRLSNVKHKILILSGKGGVGKSTVTSIIGHGLASMSPDRNVGILDADICGP 439
PD A+E IK+++ VKHKIL+LSGKGGVGKST ++ + HGLA + + +LD DICGP
Sbjct: 39 PDTAIEEIKEKMKTVKHKILVLSGKGGVGKSTFSAHLAHGLAE-DENTQIALLDIDICGP 97
Query: 440 SQPRVLGVRGEQVHNSG 490
S P+++G+ GEQVH SG
Sbjct: 98 SIPKIMGLEGEQVHQSG 114
Score = 49.6 bits (113), Expect = 6e-06
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +3
Query: 150 DNAPQHCPGTQSEDAGKASACAGCPNQNICASG 248
+ P CPG S AG+ ++C GCPNQ +CASG
Sbjct: 2 EEVPHDCPGADSAQAGRGASCQGCPNQRLCASG 34
>BC109323-1|AAI09324.1| 320|Homo sapiens nucleotide binding protein
1 (MinD homolog, E. coli) protein.
Length = 320
Score = 100 bits (240), Expect = 2e-21
Identities = 44/77 (57%), Positives = 59/77 (76%)
Frame = +2
Query: 260 PDPAVELIKQRLSNVKHKILILSGKGGVGKSTVTSIIGHGLASMSPDRNVGILDADICGP 439
PD A+E IK+++ VKHKIL+LSGKGGVGKST ++ + HGLA + + +LD DICGP
Sbjct: 39 PDTAIEEIKEKMKTVKHKILVLSGKGGVGKSTFSAHLAHGLAE-DENTQIALLDIDICGP 97
Query: 440 SQPRVLGVRGEQVHNSG 490
S P+++G+ GEQVH SG
Sbjct: 98 SIPKIMGLEGEQVHQSG 114
Score = 49.6 bits (113), Expect = 6e-06
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +3
Query: 150 DNAPQHCPGTQSEDAGKASACAGCPNQNICASG 248
+ P CPG S AG+ ++C GCPNQ +CASG
Sbjct: 2 EEVPHDCPGADSAQAGRGASCQGCPNQRLCASG 34
>BC109322-1|AAI09323.1| 320|Homo sapiens nucleotide binding protein
1 (MinD homolog, E. coli) protein.
Length = 320
Score = 97.9 bits (233), Expect = 2e-20
Identities = 43/76 (56%), Positives = 58/76 (76%)
Frame = +2
Query: 263 DPAVELIKQRLSNVKHKILILSGKGGVGKSTVTSIIGHGLASMSPDRNVGILDADICGPS 442
D A+E IK+++ VKHKIL+LSGKGGVGKST ++ + HGLA + + +LD DICGPS
Sbjct: 40 DTAIEEIKEKMKTVKHKILVLSGKGGVGKSTFSAHLAHGLAE-DENTQIALLDIDICGPS 98
Query: 443 QPRVLGVRGEQVHNSG 490
P+++G+ GEQVH SG
Sbjct: 99 IPKIMGLEGEQVHQSG 114
Score = 49.6 bits (113), Expect = 6e-06
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +3
Query: 150 DNAPQHCPGTQSEDAGKASACAGCPNQNICASG 248
+ P CPG S AG+ ++C GCPNQ +CASG
Sbjct: 2 EEVPHDCPGADSAQAGRGASCQGCPNQRLCASG 34
>AK223204-1|BAD96924.1| 320|Homo sapiens nucleotide binding protein
1 (MinD homolog, E. coli) variant protein.
Length = 320
Score = 97.9 bits (233), Expect = 2e-20
Identities = 43/76 (56%), Positives = 58/76 (76%)
Frame = +2
Query: 263 DPAVELIKQRLSNVKHKILILSGKGGVGKSTVTSIIGHGLASMSPDRNVGILDADICGPS 442
D A+E IK+++ VKHKIL+LSGKGGVGKST ++ + HGLA + + +LD DICGPS
Sbjct: 40 DTAIEEIKEKMKTVKHKILVLSGKGGVGKSTFSAHLAHGLAE-DENTQIALLDIDICGPS 98
Query: 443 QPRVLGVRGEQVHNSG 490
P+++G+ GEQVH SG
Sbjct: 99 IPKIMGLEGEQVHQSG 114
Score = 49.6 bits (113), Expect = 6e-06
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +3
Query: 150 DNAPQHCPGTQSEDAGKASACAGCPNQNICASG 248
+ P CPG S AG+ ++C GCPNQ +CASG
Sbjct: 2 EEVPHDCPGADSAQAGRGASCQGCPNQRLCASG 34
>BC100290-1|AAI00291.1| 309|Homo sapiens NUBP1 protein protein.
Length = 309
Score = 91.9 bits (218), Expect = 1e-18
Identities = 40/72 (55%), Positives = 55/72 (76%)
Frame = +2
Query: 260 PDPAVELIKQRLSNVKHKILILSGKGGVGKSTVTSIIGHGLASMSPDRNVGILDADICGP 439
PD A+E IK+++ VKHKIL+LSGKGGVGKST ++ + HGLA + + +LD DICGP
Sbjct: 39 PDTAIEEIKEKMKTVKHKILVLSGKGGVGKSTFSAHLAHGLAE-DENTQIALLDIDICGP 97
Query: 440 SQPRVLGVRGEQ 475
S P+++G+ GEQ
Sbjct: 98 SIPKIMGLEGEQ 109
Score = 49.6 bits (113), Expect = 6e-06
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +3
Query: 150 DNAPQHCPGTQSEDAGKASACAGCPNQNICASG 248
+ P CPG S AG+ ++C GCPNQ +CASG
Sbjct: 2 EEVPHDCPGADSAQAGRGASCQGCPNQRLCASG 34
>BC008005-1|AAH08005.1| 271|Homo sapiens nucleotide binding protein
2 (MinD homolog, E. coli) protein.
Length = 271
Score = 73.7 bits (173), Expect = 3e-13
Identities = 35/63 (55%), Positives = 46/63 (73%)
Frame = +2
Query: 293 LSNVKHKILILSGKGGVGKSTVTSIIGHGLASMSPDRNVGILDADICGPSQPRVLGVRGE 472
L+ V+H IL+LSGKGGVGKST+++ + LA + VGILD D+CGPS PR+LG +G
Sbjct: 10 LAGVRHIILVLSGKGGVGKSTISTELA--LALRHAGKKVGILDVDLCGPSIPRMLGAQGR 67
Query: 473 QVH 481
VH
Sbjct: 68 AVH 70
>BC002768-1|AAH02768.1| 271|Homo sapiens nucleotide binding protein
2 (MinD homolog, E. coli) protein.
Length = 271
Score = 73.7 bits (173), Expect = 3e-13
Identities = 35/63 (55%), Positives = 46/63 (73%)
Frame = +2
Query: 293 LSNVKHKILILSGKGGVGKSTVTSIIGHGLASMSPDRNVGILDADICGPSQPRVLGVRGE 472
L+ V+H IL+LSGKGGVGKST+++ + LA + VGILD D+CGPS PR+LG +G
Sbjct: 10 LAGVRHIILVLSGKGGVGKSTISTELA--LALRHAGKKVGILDVDLCGPSIPRMLGAQGR 67
Query: 473 QVH 481
VH
Sbjct: 68 AVH 70
>AL031724-1|CAC36077.1| 265|Homo sapiens C447E6.1 (nucleotide
binding protein 1 (E.coli MinD like) ) protein.
Length = 265
Score = 73.7 bits (173), Expect = 3e-13
Identities = 35/63 (55%), Positives = 46/63 (73%)
Frame = +2
Query: 293 LSNVKHKILILSGKGGVGKSTVTSIIGHGLASMSPDRNVGILDADICGPSQPRVLGVRGE 472
L+ V+H IL+LSGKGGVGKST+++ + LA + VGILD D+CGPS PR+LG +G
Sbjct: 4 LAGVRHIILVLSGKGGVGKSTISTELA--LALRHAGKKVGILDVDLCGPSIPRMLGAQGR 61
Query: 473 QVH 481
VH
Sbjct: 62 AVH 64
>AK001023-1|BAA91471.1| 271|Homo sapiens protein ( Homo sapiens
cDNA FLJ10161 fis, clone HEMBA1003555, moderately
similar to NUCLEOTIDE-BINDING PROTEIN. ).
Length = 271
Score = 73.7 bits (173), Expect = 3e-13
Identities = 35/63 (55%), Positives = 46/63 (73%)
Frame = +2
Query: 293 LSNVKHKILILSGKGGVGKSTVTSIIGHGLASMSPDRNVGILDADICGPSQPRVLGVRGE 472
L+ V+H IL+LSGKGGVGKST+++ + LA + VGILD D+CGPS PR+LG +G
Sbjct: 10 LAGVRHIILVLSGKGGVGKSTISTELA--LALRHAGKKVGILDVDLCGPSIPRMLGAQGR 67
Query: 473 QVH 481
VH
Sbjct: 68 AVH 70
>AF118394-1|AAD45242.1| 271|Homo sapiens putative nucleotide
binding protein protein.
Length = 271
Score = 73.7 bits (173), Expect = 3e-13
Identities = 35/63 (55%), Positives = 46/63 (73%)
Frame = +2
Query: 293 LSNVKHKILILSGKGGVGKSTVTSIIGHGLASMSPDRNVGILDADICGPSQPRVLGVRGE 472
L+ V+H IL+LSGKGGVGKST+++ + LA + VGILD D+CGPS PR+LG +G
Sbjct: 10 LAGVRHIILVLSGKGGVGKSTISTELA--LALRHAGKKVGILDVDLCGPSIPRMLGAQGR 67
Query: 473 QVH 481
VH
Sbjct: 68 AVH 70
>BC024919-1|AAH24919.1| 289|Homo sapiens nucleotide binding
protein-like protein.
Length = 289
Score = 57.6 bits (133), Expect = 2e-08
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = +2
Query: 278 LIKQR-LSNVKHKILILSGKGGVGKSTVTSIIGHGLASMSPDRNVGILDADICGPSQPRV 454
L KQ+ + VK I++ SGKGGVGKST + LA+ + +G+LD D+ GPS P++
Sbjct: 27 LPKQKPIEGVKQVIVVASGKGGVGKSTTAVNLALALAANDSSKAIGLLDVDVYGPSVPKM 86
Query: 455 LGVRG 469
+ ++G
Sbjct: 87 MNLKG 91
>AK022722-1|BAB14203.1| 289|Homo sapiens protein ( Homo sapiens
cDNA FLJ12660 fis, clone NT2RM4002174, moderately
similar to MRP PROTEIN. ).
Length = 289
Score = 57.6 bits (133), Expect = 2e-08
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = +2
Query: 278 LIKQR-LSNVKHKILILSGKGGVGKSTVTSIIGHGLASMSPDRNVGILDADICGPSQPRV 454
L KQ+ + VK I++ SGKGGVGKST + LA+ + +G+LD D+ GPS P++
Sbjct: 27 LPKQKPIEGVKQVIVVASGKGGVGKSTTAVNLALALAANDSSKAIGLLDVDVYGPSVPKM 86
Query: 455 LGVRG 469
+ ++G
Sbjct: 87 MNLKG 91
>BX511262-39|CAM45830.1| 224|Homo sapiens lymphocyte antigen 6
complex, locus G5C protein.
Length = 224
Score = 32.7 bits (71), Expect = 0.71
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = -1
Query: 483 LWTCSPRTPSTRGWLGPQMSASSIPTFLSGLIDARPCPIIDVTVLFPTPPLPDKIR 316
LWT S GW G + +A+ +GLI RP P+ P PLP+ IR
Sbjct: 57 LWTLSAPWAGPAGWTGEEQNATK-----TGLITRRPRPLRRRPHPAPASPLPEIIR 107
>AL805934-41|CAI18529.1| 224|Homo sapiens lymphocyte antigen 6
complex, locus G5C protein.
Length = 224
Score = 32.7 bits (71), Expect = 0.71
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = -1
Query: 483 LWTCSPRTPSTRGWLGPQMSASSIPTFLSGLIDARPCPIIDVTVLFPTPPLPDKIR 316
LWT S GW G + +A+ +GLI RP P+ P PLP+ IR
Sbjct: 57 LWTLSAPWAGPAGWTGEEQNATK-----TGLITRRPRPLRRRPHPAPASPLPEIIR 107
>AL670886-32|CAI17806.1| 224|Homo sapiens lymphocyte antigen 6
complex, locus G5C protein.
Length = 224
Score = 32.7 bits (71), Expect = 0.71
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = -1
Query: 483 LWTCSPRTPSTRGWLGPQMSASSIPTFLSGLIDARPCPIIDVTVLFPTPPLPDKIR 316
LWT S GW G + +A+ +GLI RP P+ P PLP+ IR
Sbjct: 57 LWTLSAPWAGPAGWTGEEQNATK-----TGLITRRPRPLRRRPHPAPASPLPEIIR 107
>AL662899-16|CAI18399.1| 224|Homo sapiens lymphocyte antigen 6
complex, locus G5C protein.
Length = 224
Score = 32.7 bits (71), Expect = 0.71
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = -1
Query: 483 LWTCSPRTPSTRGWLGPQMSASSIPTFLSGLIDARPCPIIDVTVLFPTPPLPDKIR 316
LWT S GW G + +A+ +GLI RP P+ P PLP+ IR
Sbjct: 57 LWTLSAPWAGPAGWTGEEQNATK-----TGLITRRPRPLRRRPHPAPASPLPEIIR 107
>AJ315541-1|CAC85522.1| 224|Homo sapiens LY6G5C, isoform A protein.
Length = 224
Score = 32.7 bits (71), Expect = 0.71
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = -1
Query: 483 LWTCSPRTPSTRGWLGPQMSASSIPTFLSGLIDARPCPIIDVTVLFPTPPLPDKIR 316
LWT S GW G + +A+ +GLI RP P+ P PLP+ IR
Sbjct: 57 LWTLSAPWAGPAGWTGEEQNATK-----TGLITRRPRPLRRRPHPAPASPLPEIIR 107
>BX538093-1|CAD98012.1| 1732|Homo sapiens hypothetical protein
protein.
Length = 1732
Score = 31.1 bits (67), Expect = 2.2
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +2
Query: 317 LILSGKGGVGKSTVTSIIG--HGLASMSP 397
L+L+G+ GVG+ T+TS++ HG SP
Sbjct: 69 LLLAGRSGVGRRTITSLVSHMHGAVLFSP 97
>AB082528-1|BAC02706.2| 1685|Homo sapiens KIAA1997 protein protein.
Length = 1685
Score = 31.1 bits (67), Expect = 2.2
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +2
Query: 317 LILSGKGGVGKSTVTSIIG--HGLASMSP 397
L+L+G+ GVG+ T+TS++ HG SP
Sbjct: 29 LLLAGRSGVGRRTITSLVSHMHGAVLFSP 57
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 30.3 bits (65), Expect = 3.8
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +3
Query: 69 LNHSIRELGF*RINSRQIVISNMSSVPDNAPQHCPGTQSEDAGKASACAGCPN 227
L H I+ELG ++ + ++ + AP PGT + D G + + P+
Sbjct: 13108 LTHGIKELGPYTLDRNSLYVNGFTHRSSVAPTSTPGTSTVDLGTSGTPSSLPS 13160
Score = 30.3 bits (65), Expect = 3.8
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +3
Query: 69 LNHSIRELGF*RINSRQIVISNMSSVPDNAPQHCPGTQSEDAGKASACAGCPN 227
L H I+ELG ++ + ++ + AP PGT + D G + + P+
Sbjct: 14044 LTHGIKELGPYTLDRNSLYVNGFTHRSSVAPTSTPGTSTVDLGTSGTPSSLPS 14096
>AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.
Length = 6995
Score = 30.3 bits (65), Expect = 3.8
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +3
Query: 69 LNHSIRELGF*RINSRQIVISNMSSVPDNAPQHCPGTQSEDAGKASACAGCPN 227
L H I+ELG ++ + ++ + AP PGT + D G + + P+
Sbjct: 4658 LTHGIKELGPYTLDRNSLYVNGFTHRSSVAPTSTPGTSTVDLGTSGTPSSLPS 4710
>BC108280-1|AAI08281.1| 896|Homo sapiens echinoderm microtubule
associated protein like 3 protein.
Length = 896
Score = 29.9 bits (64), Expect = 5.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 126 ISNMSSVPDNAPQHCPGTQSEDAGKASACAGCP 224
+SN P A + GTQSE G +S+ AG P
Sbjct: 102 LSNGPPAPQGASEEPSGTQSEGGGSSSSGAGSP 134
>AK093146-1|BAC04073.1| 889|Homo sapiens protein ( Homo sapiens
cDNA FLJ35827 fis, clone TESTI2006453, weakly similar to
Microtubule-associated protein like echinoderm EMAP. ).
Length = 889
Score = 29.9 bits (64), Expect = 5.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 126 ISNMSSVPDNAPQHCPGTQSEDAGKASACAGCP 224
+SN P A + GTQSE G +S+ AG P
Sbjct: 74 LSNGPPAPQGASEEPSGTQSEGGGSSSSGAGSP 106
>U13052-1|AAC50067.1| 296|Homo sapiens kir protein.
Length = 296
Score = 29.1 bits (62), Expect = 8.8
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 248 RSTQPDPAVELIKQRLSNVKHKILILSGKGGVGKSTVTSIIGHGLASMSPDRNV 409
RS D +I N ++++++ G+ GVGKST+ +I SM D V
Sbjct: 56 RSWSSDSTDSVISSESGNTYYRVVLI-GEQGVGKSTLANIFAGVHDSMDSDCEV 108
>U10550-1|AAA64911.1| 296|Homo sapiens Gem protein.
Length = 296
Score = 29.1 bits (62), Expect = 8.8
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 248 RSTQPDPAVELIKQRLSNVKHKILILSGKGGVGKSTVTSIIGHGLASMSPDRNV 409
RS D +I N ++++++ G+ GVGKST+ +I SM D V
Sbjct: 56 RSWSSDSTDSVISSESGNTYYRVVLI-GEQGVGKSTLANIFAGVHDSMDSDCEV 108
>BC022010-1|AAH22010.1| 296|Homo sapiens GTP binding protein
overexpressed in skeletal muscle protein.
Length = 296
Score = 29.1 bits (62), Expect = 8.8
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 248 RSTQPDPAVELIKQRLSNVKHKILILSGKGGVGKSTVTSIIGHGLASMSPDRNV 409
RS D +I N ++++++ G+ GVGKST+ +I SM D V
Sbjct: 56 RSWSSDSTDSVISSESGNTYYRVVLI-GEQGVGKSTLANIFAGVHDSMDSDCEV 108
>AF144094-1|AAF05903.1| 3530|Homo sapiens unconventional myosin-15
protein.
Length = 3530
Score = 29.1 bits (62), Expect = 8.8
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +2
Query: 305 KHKILILSGKGGVGKSTVTSIIGHGLASMSPDRNV 409
+++ +I+SG+ G GK+ T +I LA+M+ R V
Sbjct: 1307 QNQCIIISGESGSGKTEATKLILRYLAAMNQKREV 1341
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,529,999
Number of Sequences: 237096
Number of extensions: 1644881
Number of successful extensions: 4682
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 4410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4671
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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