Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00222X
(492 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g50960.1 68418.m06320 nucleotide-binding family protein simil... 94 5e-20
At4g19540.1 68417.m02874 expressed protein 50 6e-07
At3g24430.1 68416.m03066 expressed protein contains Pfam profile... 49 2e-06
At5g24020.1 68418.m02822 septum site-determining protein (MIND) ... 34 0.045
At5g05000.3 68418.m00531 translocate of chloroplast 34 (TOC34) /... 34 0.045
At5g05000.2 68418.m00530 translocate of chloroplast 34 (TOC34) /... 34 0.045
At5g05000.1 68418.m00529 translocate of chloroplast 34 (TOC34) /... 34 0.045
At5g47250.1 68418.m05826 disease resistance protein (CC-NBS-LRR ... 33 0.10
At1g02280.1 68414.m00169 GTP-binding protein (TOC33) identical t... 33 0.10
At3g54950.1 68416.m06092 patatin-related low similarity to patat... 33 0.14
At5g43470.2 68418.m05315 disease resistance protein (CC-NBS-LRR ... 31 0.56
At5g43470.1 68418.m05314 disease resistance protein (CC-NBS-LRR ... 31 0.56
At5g63020.1 68418.m07906 disease resistance protein (CC-NBS-LRR ... 30 0.74
At3g10350.1 68416.m01241 anion-transporting ATPase family protei... 30 0.74
At2g32850.2 68415.m04025 protein kinase family protein contains ... 30 0.74
At2g32850.1 68415.m04024 protein kinase family protein contains ... 30 0.74
At1g51480.1 68414.m05794 disease resistance protein (CC-NBS-LRR ... 30 0.74
At1g01910.2 68414.m00109 anion-transporting ATPase, putative sim... 30 0.74
At1g01910.1 68414.m00108 anion-transporting ATPase, putative sim... 30 0.74
At5g25420.1 68418.m03016 xanthine/uracil permease family protein... 29 2.2
At1g71890.1 68414.m08311 sucrose transporter / sucrose-proton sy... 28 3.0
At1g53350.1 68414.m06048 disease resistance protein (CC-NBS-LRR ... 28 3.0
At5g48620.1 68418.m06013 disease resistance protein (CC-NBS-LRR ... 28 3.9
At5g04310.1 68418.m00423 pectate lyase family protein similar to... 28 3.9
At4g25750.1 68417.m03707 ABC transporter family protein Bactroce... 28 3.9
At1g61300.1 68414.m06909 disease resistance protein (NBS-LRR cla... 28 3.9
At1g55620.2 68414.m06367 voltage-gated chloride channel family p... 28 3.9
At5g05400.1 68418.m00582 disease resistance protein (CC-NBS-LRR ... 27 5.2
At1g66090.1 68414.m07501 disease resistance protein (TIR-NBS cla... 27 5.2
At1g56520.1 68414.m06499 disease resistance protein (TIR-NBS-LRR... 27 5.2
At4g20910.1 68417.m03031 double-stranded RNA binding protein-rel... 27 6.9
At2g16790.1 68415.m01925 shikimate kinase family protein similar... 27 6.9
At1g75290.1 68414.m08746 isoflavone reductase, putative similar ... 27 6.9
At5g59500.1 68418.m07457 expressed protein 27 9.1
At5g43740.2 68418.m05348 disease resistance protein (CC-NBS-LRR ... 27 9.1
At5g43740.1 68418.m05347 disease resistance protein (CC-NBS-LRR ... 27 9.1
At5g17970.1 68418.m02108 disease resistance protein (TIR-NBS-LRR... 27 9.1
At1g64070.1 68414.m07258 disease resistance protein (TIR-NBS-LRR... 27 9.1
At1g03030.1 68414.m00275 phosphoribulokinase/uridine kinase fami... 27 9.1
>At5g50960.1 68418.m06320 nucleotide-binding family protein similar
to Nucleotide-binding protein 1 (NBP 1) (SP:Q9R060) [Mus
musculus]; contains Pfam PF00991 : ParA family ATPase
Length = 350
Score = 93.9 bits (223), Expect = 5e-20
Identities = 42/76 (55%), Positives = 57/76 (75%)
Frame = +2
Query: 260 PDPAVELIKQRLSNVKHKILILSGKGGVGKSTVTSIIGHGLASMSPDRNVGILDADICGP 439
PDP + I +R+S VKHKIL+LSGKGGVGKST ++ + LA M D VG++D DICGP
Sbjct: 44 PDPDLVAIAERMSTVKHKILVLSGKGGVGKSTFSAQLSFALAGM--DHQVGLMDIDICGP 101
Query: 440 SQPRVLGVRGEQVHNS 487
S P++LG+ G+++H S
Sbjct: 102 SIPKMLGLEGQEIHQS 117
Score = 58.8 bits (136), Expect = 2e-09
Identities = 21/34 (61%), Positives = 28/34 (82%)
Frame = +3
Query: 144 VPDNAPQHCPGTQSEDAGKASACAGCPNQNICAS 245
+P++A +HCPG QSE AGK+ +CAGCPNQ CA+
Sbjct: 6 IPEDANEHCPGPQSESAGKSDSCAGCPNQEACAT 39
>At4g19540.1 68417.m02874 expressed protein
Length = 313
Score = 50.4 bits (115), Expect = 6e-07
Identities = 26/77 (33%), Positives = 42/77 (54%)
Frame = +2
Query: 233 HLRIWRSTQPDPAVELIKQRLSNVKHKILILSGKGGVGKSTVTSIIGHGLASMSPDRNVG 412
H+ ++ + + RL VK I + SGKGGVGKS+ + LA+ + +G
Sbjct: 19 HISAYKFSSASAGGRTTELRLHGVKDIIAVASGKGGVGKSSTAVNLAVALANKC-ELKIG 77
Query: 413 ILDADICGPSQPRVLGV 463
+LDAD+ GPS P ++ +
Sbjct: 78 LLDADVYGPSVPIMMNI 94
>At3g24430.1 68416.m03066 expressed protein contains Pfam profile
PF01883: Domain of unknown function
Length = 532
Score = 48.8 bits (111), Expect = 2e-06
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +2
Query: 218 MP*SKHLRIWRSTQPDPAVEL--IKQRLSNVKHKILILSGKGGVGKSTVTSIIGHGLASM 391
+P K + + S QP + + LS + + I + S KGGVGKSTV + + LA M
Sbjct: 145 LPWVKKVNVTMSAQPAKPIFAGQLPFGLSRISNIIAVSSCKGGVGKSTVAVNLAYTLAGM 204
Query: 392 SPDRNVGILDADICGPSQPRVL 457
VGI DAD+ GPS P ++
Sbjct: 205 G--ARVGIFDADVYGPSLPTMV 224
>At5g24020.1 68418.m02822 septum site-determining protein (MIND)
identical to MinD [Arabidopsis thaliana] GI:6759277;
contains Pfam PF00991 : ParA family ATPase
Length = 326
Score = 34.3 bits (75), Expect = 0.045
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +2
Query: 314 ILILSGKGGVGKSTVTSIIGHGLASMSPDRNVGILDADI 430
++I SGKGGVGK+T T+ +G LA +V +DAD+
Sbjct: 61 VVITSGKGGVGKTTTTANVGLSLARYG--FSVVAIDADL 97
>At5g05000.3 68418.m00531 translocate of chloroplast 34 (TOC34) /
GTP-binding protein (OEP34) contains Pfam PF04548: AIG1
family;contains TIGRFAM TIGR00991: GTP-binding protein
and TIGR00231: small GTP-binding protein domain; 99.7%
identical to atToc34 protein (GI:11557975) [Arabidopsis
thaliana]; similar to Chain A, Pea Toc34 - A Novel
Gtpase Of The Chloroplast Protein Translocon
(GI:1865556) [Pisum sativum]; almost identical to
SP:Q38906 Translocase of chloroplast 34; identical to
cDNA GTP-binding protein (OEP34) GI:1151243
Length = 313
Score = 34.3 bits (75), Expect = 0.045
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +2
Query: 284 KQRLSNVKHKILILSGKGGVGK-STVTSIIGHGLASMSPDRNVGI 415
K + +V +++ GKGGVGK STV S+IG A++S ++ G+
Sbjct: 30 KYKEEDVSSLTVLVMGKGGVGKSSTVNSVIGEKAAAVSTFQSEGL 74
>At5g05000.2 68418.m00530 translocate of chloroplast 34 (TOC34) /
GTP-binding protein (OEP34) contains Pfam PF04548: AIG1
family;contains TIGRFAM TIGR00991: GTP-binding protein
and TIGR00231: small GTP-binding protein domain; 99.7%
identical to atToc34 protein (GI:11557975) [Arabidopsis
thaliana]; similar to Chain A, Pea Toc34 - A Novel
Gtpase Of The Chloroplast Protein Translocon
(GI:1865556) [Pisum sativum]; almost identical to
SP:Q38906 Translocase of chloroplast 34; identical to
cDNA GTP-binding protein (OEP34) GI:1151243
Length = 313
Score = 34.3 bits (75), Expect = 0.045
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +2
Query: 284 KQRLSNVKHKILILSGKGGVGK-STVTSIIGHGLASMSPDRNVGI 415
K + +V +++ GKGGVGK STV S+IG A++S ++ G+
Sbjct: 30 KYKEEDVSSLTVLVMGKGGVGKSSTVNSVIGEKAAAVSTFQSEGL 74
>At5g05000.1 68418.m00529 translocate of chloroplast 34 (TOC34) /
GTP-binding protein (OEP34) contains Pfam PF04548: AIG1
family;contains TIGRFAM TIGR00991: GTP-binding protein
and TIGR00231: small GTP-binding protein domain; 99.7%
identical to atToc34 protein (GI:11557975) [Arabidopsis
thaliana]; similar to Chain A, Pea Toc34 - A Novel
Gtpase Of The Chloroplast Protein Translocon
(GI:1865556) [Pisum sativum]; almost identical to
SP:Q38906 Translocase of chloroplast 34; identical to
cDNA GTP-binding protein (OEP34) GI:1151243
Length = 313
Score = 34.3 bits (75), Expect = 0.045
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +2
Query: 284 KQRLSNVKHKILILSGKGGVGK-STVTSIIGHGLASMSPDRNVGI 415
K + +V +++ GKGGVGK STV S+IG A++S ++ G+
Sbjct: 30 KYKEEDVSSLTVLVMGKGGVGKSSTVNSVIGEKAAAVSTFQSEGL 74
>At5g47250.1 68418.m05826 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 843
Score = 33.1 bits (72), Expect = 0.10
Identities = 19/73 (26%), Positives = 37/73 (50%)
Frame = +2
Query: 263 DPAVELIKQRLSNVKHKILILSGKGGVGKSTVTSIIGHGLASMSPDRNVGILDADICGPS 442
D +E + L ++++L + G GGVGK+T+ ++I + +S D +V I
Sbjct: 161 DTTLEKTWESLRKDENRMLGIFGMGGVGKTTLLTLINNKFVEVSDDYDVVIWVESSKDAD 220
Query: 443 QPRVLGVRGEQVH 481
++ GE++H
Sbjct: 221 VGKIQDAIGERLH 233
>At1g02280.1 68414.m00169 GTP-binding protein (TOC33) identical to
atToc33 protein (GI:11557973) [Arabidopsis thaliana];
Carboxyl-terminal end highly similar to GTP-binding
protein SP:U43377, location of EST gb|AA394770 and
gb|R30089; identical to cDNA for chloroplast atToc33
protein GI:11557972
Length = 297
Score = 33.1 bits (72), Expect = 0.10
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +2
Query: 284 KQRLSNVKHKILILSGKGGVGKS-TVTSIIGHGLASMSPDRNVGI 415
K + ++ +++ GKGGVGKS TV S+IG + +SP + G+
Sbjct: 28 KLKQKDMNSMTVLVLGKGGVGKSSTVNSLIGEQVVRVSPFQAEGL 72
>At3g54950.1 68416.m06092 patatin-related low similarity to patatin
[GI:169500][Solanum tuberosum]; contains Patatin domain
PF01734
Length = 488
Score = 32.7 bits (71), Expect = 0.14
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = +2
Query: 227 SKHLRIWRSTQPDPAVELIKQRLSNVKHKILILS----GKGGVGKSTVTSIIGHGLASMS 394
SK L + ++P+PA ++ + N + KI ILS G G+ + + H L S S
Sbjct: 69 SKFLFGYDDSKPEPANSVVAGSIKNQRGKICILSIDGGGMRGILPGKALAYLEHALKSKS 128
Query: 395 PDRNVGILD 421
D N I D
Sbjct: 129 GDPNARIAD 137
>At5g43470.2 68418.m05315 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein. Closest
Col-0 homolog to RPP8
Length = 908
Score = 30.7 bits (66), Expect = 0.56
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +2
Query: 275 ELIKQRLSNVKHKILILSGKGGVGKSTVTSIIGH 376
EL+ + N H+++ ++G GG+GK+T+ + H
Sbjct: 174 ELVGHLVENDVHQVVSIAGMGGIGKTTLARQVFH 207
>At5g43470.1 68418.m05314 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein. Closest
Col-0 homolog to RPP8
Length = 908
Score = 30.7 bits (66), Expect = 0.56
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +2
Query: 275 ELIKQRLSNVKHKILILSGKGGVGKSTVTSIIGH 376
EL+ + N H+++ ++G GG+GK+T+ + H
Sbjct: 174 ELVGHLVENDVHQVVSIAGMGGIGKTTLARQVFH 207
>At5g63020.1 68418.m07906 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 888
Score = 30.3 bits (65), Expect = 0.74
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 263 DPAVELIKQRLSNVKHKILILSGKGGVGKSTVTSIIGHGLASMSPDRNVGI 415
DP +E RL + IL L G GGVGK+T+ S I + + + + ++ I
Sbjct: 159 DPMLESAWNRLMEDEIGILGLHGMGGVGKTTLLSHINNRFSRVGGEFDIVI 209
>At3g10350.1 68416.m01241 anion-transporting ATPase family protein
similar to SP|O43681 Arsenical pump-driving ATPase (EC
3.6.3.16) (Arsenite-translocating ATPase) (Arsenical
resistance ATPase) (Arsenite-transporting ATPase) (ARSA)
(ASNA-I) {Homo sapiens}; contains Pfam profile PF02374:
Anion-transporting ATPase; contains non-consensus GA
donor splice site at intron 5
Length = 411
Score = 30.3 bits (65), Expect = 0.74
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 236 LRIWRSTQPDPAVELIKQRLSNVKHKILILSGKGGVGKST 355
L++ P + + +S K K +L GKGGVGK++
Sbjct: 63 LQVKSVASPTETISEFDEMVSGTKRKYYMLGGKGGVGKTS 102
>At2g32850.2 68415.m04025 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 670
Score = 30.3 bits (65), Expect = 0.74
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +2
Query: 284 KQRLSNVKHKILILSGKGGVGKSTVTSIIGHGLASMSPDRNVGILDADICGPSQPRVLGV 463
++ L V +I +L K G V ++ HG+ M ++ +L D CG S VL
Sbjct: 64 EESLELVMKEISVL--KSLKGHPNVVTLYAHGILDMGRNKKEALLAMDFCGKSLVDVLEN 121
Query: 464 RG 469
RG
Sbjct: 122 RG 123
>At2g32850.1 68415.m04024 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 650
Score = 30.3 bits (65), Expect = 0.74
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +2
Query: 284 KQRLSNVKHKILILSGKGGVGKSTVTSIIGHGLASMSPDRNVGILDADICGPSQPRVLGV 463
++ L V +I +L K G V ++ HG+ M ++ +L D CG S VL
Sbjct: 64 EESLELVMKEISVL--KSLKGHPNVVTLYAHGILDMGRNKKEALLAMDFCGKSLVDVLEN 121
Query: 464 RG 469
RG
Sbjct: 122 RG 123
>At1g51480.1 68414.m05794 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 941
Score = 30.3 bits (65), Expect = 0.74
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 272 VELIKQRLSNVKHKILILSGKGGVGKSTVTSIIGHGLASMSPDRNVGI 415
VE+ + L N + + L L G GGVGK+T+ + I + + + +V I
Sbjct: 248 VEMAWKSLMNDEIRTLCLHGMGGVGKTTLLACINNKFVELESEFDVVI 295
>At1g01910.2 68414.m00109 anion-transporting ATPase, putative
similar to SP|O43681 Arsenical pump-driving ATPase (EC
3.6.3.16) (Arsenite-translocating ATPase) (Arsenical
resistance ATPase) (Arsenite-transporting ATPase) (ARSA)
(ASNA-I) {Homo sapiens}; contains Pfam profile PF02374:
Anion-transporting ATPase
Length = 353
Score = 30.3 bits (65), Expect = 0.74
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +2
Query: 311 KILILSGKGGVGKSTVTSIIGHGLASM 391
K + + GKGGVGK+T +SI+ LAS+
Sbjct: 20 KWVFVGGKGGVGKTTCSSILAICLASV 46
>At1g01910.1 68414.m00108 anion-transporting ATPase, putative
similar to SP|O43681 Arsenical pump-driving ATPase (EC
3.6.3.16) (Arsenite-translocating ATPase) (Arsenical
resistance ATPase) (Arsenite-transporting ATPase) (ARSA)
(ASNA-I) {Homo sapiens}; contains Pfam profile PF02374:
Anion-transporting ATPase
Length = 353
Score = 30.3 bits (65), Expect = 0.74
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +2
Query: 311 KILILSGKGGVGKSTVTSIIGHGLASM 391
K + + GKGGVGK+T +SI+ LAS+
Sbjct: 20 KWVFVGGKGGVGKTTCSSILAICLASV 46
>At5g25420.1 68418.m03016 xanthine/uracil permease family protein
contains Pfam profile: PF00860 permease family
Length = 419
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 435 PQMSASSIPTFLSGLIDARPCPIIDVTVLF 346
PQ + +S T +GLI PCP D+T F
Sbjct: 245 PQTTQTSCRTDRTGLITNTPCPTFDITDSF 274
>At1g71890.1 68414.m08311 sucrose transporter / sucrose-proton
symporter (SUC5) nearly identical to sucrose transporter
[Arabidopsis thaliana] GI:12057172
Length = 512
Score = 28.3 bits (60), Expect = 3.0
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = -1
Query: 447 GWLGPQMSASSIPTFLSGLIDARPCPIIDVTVLFPTPPLPD 325
G L Q ++P+F+ G I A ++ +TVL P+PP PD
Sbjct: 463 GPLDAQFGGGNLPSFVVGAIAAAVSGVLALTVL-PSPP-PD 501
>At1g53350.1 68414.m06048 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 906
Score = 28.3 bits (60), Expect = 3.0
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 275 ELIKQRLSNVKHKILILSGKGGVGKSTVTSIIGH 376
EL+ + N +++ +SG GG+GK+T+ + H
Sbjct: 172 ELVDHLVENDSVQVVSVSGMGGIGKTTLARQVFH 205
>At5g48620.1 68418.m06013 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 908
Score = 27.9 bits (59), Expect = 3.9
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +2
Query: 275 ELIKQRLSNVKHKILILSGKGGVGKSTVTSIIGH 376
EL+ + N ++++ ++G GG+GK+T+ + H
Sbjct: 174 ELVGHLVENDIYQVVSIAGMGGIGKTTLARQVFH 207
>At5g04310.1 68418.m00423 pectate lyase family protein similar to
pectate lyase GP:14531296 from [Fragaria x ananassa]
Length = 518
Score = 27.9 bits (59), Expect = 3.9
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +2
Query: 257 QPDPAVELIKQRLS-NVKHKILILSGKGGVGKSTVTSIIGHGLASMSPDRNVGILDADI- 430
QP+P + + +KH+++I S K G+ T I GHG ++ +V I + I
Sbjct: 158 QPEPLWIIFSSDMGIKLKHELIIGSYKTIDGRGTNIQITGHGCLTIQQVSHVIIHNVHIH 217
Query: 431 -CGPS 442
C PS
Sbjct: 218 HCKPS 222
>At4g25750.1 68417.m03707 ABC transporter family protein Bactrocera
tryoni membrane transporter (white) gene, PID:g3676298
Length = 577
Score = 27.9 bits (59), Expect = 3.9
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +2
Query: 254 TQPDPAVELIKQRLSNVKHKILILSGKGGVGKSTVTSIIGHGLASMSPDRNVGILDADIC 433
T P+ L L++ +IL + G G GKST+ I+ A SP +L++ +
Sbjct: 23 TAEQPSFILRNITLTSHPSQILAIIGPSGAGKSTLLDILA---ARTSPTSGSILLNSVLI 79
Query: 434 GPSQPR 451
PS R
Sbjct: 80 NPSSYR 85
>At1g61300.1 68414.m06909 disease resistance protein (NBS-LRR
class), putative domain signature NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 762
Score = 27.9 bits (59), Expect = 3.9
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = +2
Query: 248 RSTQP----DPAVELIKQRLSNVKHKILILSGKGGVGKSTVTSIIGHGLASMS 394
R TQP + +E RL + I+ L G GGVGK+T+ I + A MS
Sbjct: 37 RPTQPTIGQEEMLEKAWNRLMEDRVGIMGLHGMGGVGKTTLFKKIHNKFAKMS 89
>At1g55620.2 68414.m06367 voltage-gated chloride channel family
protein contains Pfam profiles PF00654: Voltage gated
chloride channel, PF00571: CBS domain
Length = 781
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 233 HLRIWRSTQPDPAVELIKQRLSNVKHKILILSGKGGV 343
H W T + A L QRL++ H+IL++ GGV
Sbjct: 157 HEWAWAGTPNEGAAWLRLQRLADTWHRILLIPVTGGV 193
>At5g05400.1 68418.m00582 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 874
Score = 27.5 bits (58), Expect = 5.2
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 314 ILILSGKGGVGKSTVTSIIGHGLASMSPDRNVGI 415
+L + G GGVGK+T+ S I + ++S D ++ I
Sbjct: 177 LLGIYGMGGVGKTTLLSQINNKFRTVSNDFDIAI 210
>At1g66090.1 68414.m07501 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 429
Score = 27.5 bits (58), Expect = 5.2
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 305 KHKILILSGKGGVGKSTVTSIIGHGLASMS 394
K KI+ +SG G+GKST+ + H L S S
Sbjct: 219 KVKIVGISGPAGIGKSTIARAL-HNLLSSS 247
>At1g56520.1 68414.m06499 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 897
Score = 27.5 bits (58), Expect = 5.2
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 293 LSNVKHKILILSGKGGVGKSTVTSIIGHGLASM 391
L N KI+ +SG G+GKST+ + + L++M
Sbjct: 202 LKNDGVKIVGISGPAGIGKSTIATALHGRLSNM 234
>At4g20910.1 68417.m03031 double-stranded RNA binding
protein-related / DsRBD protein-related contains weak
similarity to Pfam profile PF00035: Double-stranded RNA
binding motif
Length = 942
Score = 27.1 bits (57), Expect = 6.9
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 362 MSQYFFRPPLYRTRSEFCALHWRDVVLSVLL 270
M FF+PPL + R E+ H R+ S L+
Sbjct: 688 MEAAFFKPPLSKQRVEYALKHIRESSASTLV 718
>At2g16790.1 68415.m01925 shikimate kinase family protein similar to
thermosensitive glucokinase from Escherichia coli
[SP|P39208] [SP|P46859]; contains Pfam profile PF01202:
shikimate kinase
Length = 189
Score = 27.1 bits (57), Expect = 6.9
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 296 SNVKHKILILSGKGGVGKSTVTSIIGHGLA 385
++V K++ + G G GKST+ ++G L+
Sbjct: 5 NDVTGKVIAIMGVSGAGKSTIGKMLGKALS 34
>At1g75290.1 68414.m08746 isoflavone reductase, putative similar to
SP|P52577 Isoflavone reductase homolog P3 (EC 1.3.1.-)
{Arabidopsis thaliana}; contains Pfam profile PF02716:
Isoflavone reductase
Length = 323
Score = 27.1 bits (57), Expect = 6.9
Identities = 11/43 (25%), Positives = 25/43 (58%)
Frame = +2
Query: 293 LSNVKHKILILSGKGGVGKSTVTSIIGHGLASMSPDRNVGILD 421
+++ K KIL++ G G +GK + + + G ++++ R + D
Sbjct: 1 MASEKSKILVIGGTGHIGKLIIEASVKAGHSTLALVREASLSD 43
>At5g59500.1 68418.m07457 expressed protein
Length = 396
Score = 26.6 bits (56), Expect = 9.1
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 489 PELWTCSPRTPSTRGWLGPQMSASS 415
P +W+C+P W+ P+ S SS
Sbjct: 56 PSIWSCAPFPVRKGSWVPPRCSISS 80
>At5g43740.2 68418.m05348 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 862
Score = 26.6 bits (56), Expect = 9.1
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 263 DPAVELIKQRLSNVKHKILILSGKGGVGKSTVTSIIGHGLASMSPDRNVGI 415
D VE+ L N + L L G GGVGK+T+ + + + + +V I
Sbjct: 156 DKLVEMAWSSLMNDEIGTLGLYGMGGVGKTTLLESLNNKFVELESEFDVVI 206
>At5g43740.1 68418.m05347 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 862
Score = 26.6 bits (56), Expect = 9.1
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 263 DPAVELIKQRLSNVKHKILILSGKGGVGKSTVTSIIGHGLASMSPDRNVGI 415
D VE+ L N + L L G GGVGK+T+ + + + + +V I
Sbjct: 156 DKLVEMAWSSLMNDEIGTLGLYGMGGVGKTTLLESLNNKFVELESEFDVVI 206
>At5g17970.1 68418.m02108 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 780
Score = 26.6 bits (56), Expect = 9.1
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +2
Query: 311 KILILSGKGGVGKSTVTSIIGHGLASMSPD 400
K++ + G G+GK+T+T I+ + L+S + D
Sbjct: 212 KMIGVWGPAGIGKTTITRILYNQLSSSNDD 241
>At1g64070.1 68414.m07258 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 997
Score = 26.6 bits (56), Expect = 9.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 293 LSNVKHKILILSGKGGVGKSTVTSIIGHGLAS 388
L N + K++ +SG G+GKST+ + H L S
Sbjct: 203 LDNDEVKMVAISGPAGIGKSTIGRAL-HSLLS 233
>At1g03030.1 68414.m00275 phosphoribulokinase/uridine kinase family
protein contains Pfam PF00485: Phosphoribulokinase /
Uridine kinase family; Belongs to Interpro IPR006083
Phosphoribulokinase/uridine kinase family; similar to
Uridine kinase (Uridine monophosphokinase) (SP:P27515)
{Saccharomyces cerevisiae}; ESTs gb|AA585719,
gb|AA728503 and gb|T22272 come from this gene
Length = 301
Score = 26.6 bits (56), Expect = 9.1
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +2
Query: 299 NVKHKILILSGKGGVGKSTVTSIIGHGLASMSPDRNVGILDADICGPSQPRVLGVRGEQV 478
N+K +++ L+G G GKSTV + + + + P + DA++ P VL + G +
Sbjct: 93 NLK-RLVGLAGPPGAGKSTVANEVVRRVNKLWPQK-AASFDAEVNPPDVAIVLPMDGFHL 150
Query: 479 HNS 487
+ S
Sbjct: 151 YRS 153
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,051,820
Number of Sequences: 28952
Number of extensions: 229770
Number of successful extensions: 802
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 858708096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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