Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00221
         (765 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001829-1|AAN71584.1|  450|Drosophila melanogaster RH45546p pro...    36   0.080
AE014296-3325|AAF49033.2|  450|Drosophila melanogaster CG6680-PB...    36   0.080
AE014296-3324|AAF49034.2|  450|Drosophila melanogaster CG6680-PA...    36   0.080
BT010110-1|AAQ22579.1|  372|Drosophila melanogaster GH04125p pro...    29   5.3  
AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation ...    29   5.3  
AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA...    29   5.3  
AE013599-255|AAF57408.2|  372|Drosophila melanogaster CG9456-PA ...    29   5.3  
AY061542-1|AAL29090.2|  653|Drosophila melanogaster LP03106p pro...    29   9.2  
AE014297-4649|AAF57075.1|  649|Drosophila melanogaster CG1342-PA...    29   9.2  
AE014134-2538|AAF53422.1| 1801|Drosophila melanogaster CG3491-PA...    29   9.2  

>BT001829-1|AAN71584.1|  450|Drosophila melanogaster RH45546p
           protein.
          Length = 450

 Score = 35.5 bits (78), Expect = 0.080
 Identities = 19/74 (25%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
 Frame = +2

Query: 350 TNLHNGLTEKIGNFSIELLYHTS-NLEQSKGNLIMSPITVWTVLAVIAEGASGNRDGRSI 526
           T++   +++ + +F+++LL   S  +E++  + ++SP +VW++L ++ EG+ G       
Sbjct: 66  TDVLVSISQGVQDFALDLLQRISVEVEKANKDFMISPFSVWSLLVLLYEGSEGE------ 119

Query: 527 MRYGYKQSIRTSLE 568
            R   K+S+R ++E
Sbjct: 120 TRNQLKKSLRINVE 133


>AE014296-3325|AAF49033.2|  450|Drosophila melanogaster CG6680-PB,
           isoform B protein.
          Length = 450

 Score = 35.5 bits (78), Expect = 0.080
 Identities = 19/74 (25%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
 Frame = +2

Query: 350 TNLHNGLTEKIGNFSIELLYHTS-NLEQSKGNLIMSPITVWTVLAVIAEGASGNRDGRSI 526
           T++   +++ + +F+++LL   S  +E++  + ++SP +VW++L ++ EG+ G       
Sbjct: 66  TDVLVSISQGVQDFALDLLQRISVEVEKANKDFMISPFSVWSLLVLLYEGSEGE------ 119

Query: 527 MRYGYKQSIRTSLE 568
            R   K+S+R ++E
Sbjct: 120 TRNQLKKSLRINVE 133


>AE014296-3324|AAF49034.2|  450|Drosophila melanogaster CG6680-PA,
           isoform A protein.
          Length = 450

 Score = 35.5 bits (78), Expect = 0.080
 Identities = 19/74 (25%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
 Frame = +2

Query: 350 TNLHNGLTEKIGNFSIELLYHTS-NLEQSKGNLIMSPITVWTVLAVIAEGASGNRDGRSI 526
           T++   +++ + +F+++LL   S  +E++  + ++SP +VW++L ++ EG+ G       
Sbjct: 66  TDVLVSISQGVQDFALDLLQRISVEVEKANKDFMISPFSVWSLLVLLYEGSEGE------ 119

Query: 527 MRYGYKQSIRTSLE 568
            R   K+S+R ++E
Sbjct: 120 TRNQLKKSLRINVE 133


>BT010110-1|AAQ22579.1|  372|Drosophila melanogaster GH04125p
           protein.
          Length = 372

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 10/35 (28%), Positives = 23/35 (65%)
 Frame = +2

Query: 404 LYHTSNLEQSKGNLIMSPITVWTVLAVIAEGASGN 508
           +Y   +   +  NL++SP+++ T+L+++  GA G+
Sbjct: 21  IYQLLSKSHTNQNLVVSPVSIETILSMVFMGAEGS 55


>AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation
            initiation factoreIF4G protein.
          Length = 1666

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +2

Query: 488  AEGASGNRDGRSIMRYGYKQSIRTSLEANSKKSQNGSESTRTQ*N 622
            ++G SG RD R   RYG  +S      ++S++  NG+   + Q N
Sbjct: 1039 SQGGSGKRDDRGNSRYGESRSSSAYGGSHSQRGDNGNLRHQQQNN 1083


>AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA
           protein.
          Length = 1345

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +2

Query: 488 AEGASGNRDGRSIMRYGYKQSIRTSLEANSKKSQNGSESTRTQ*N 622
           ++G SG RD R   RYG  +S      ++S++  NG+   + Q N
Sbjct: 718 SQGGSGKRDDRGNSRYGESRSSSAYGGSHSQRGDNGNLRHQQQNN 762


>AE013599-255|AAF57408.2|  372|Drosophila melanogaster CG9456-PA
           protein.
          Length = 372

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 10/35 (28%), Positives = 23/35 (65%)
 Frame = +2

Query: 404 LYHTSNLEQSKGNLIMSPITVWTVLAVIAEGASGN 508
           +Y   +   +  NL++SP+++ T+L+++  GA G+
Sbjct: 21  IYQLLSKSHTNQNLVVSPVSIETILSMVFMGAEGS 55


>AY061542-1|AAL29090.2|  653|Drosophila melanogaster LP03106p
           protein.
          Length = 653

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 22/105 (20%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
 Frame = +2

Query: 272 KLIMCLLKFLVLAIVPLSFAQNIPKATNLHNGLTEKIGNF-SIELLYHTSNLEQSKGNLI 448
           K ++C +   +LA +       +      H     ++    +++LL    +++    N +
Sbjct: 6   KAVLCAIFVTLLAAIGQGLPTQLEDEN--HGSFAGQVSQLIALQLLKFNKDID---ANQV 60

Query: 449 MSPITVWTVLAVIAEGASGNRDGRSIMRYGYKQSIRTSLEANSKK 583
            SP+ V ++LA++AE + G+        +GY +  RT L    K+
Sbjct: 61  HSPLGVASILAMLAEASEGDTYSEFEQVFGYPKD-RTKLRDAYKR 104


>AE014297-4649|AAF57075.1|  649|Drosophila melanogaster CG1342-PA
           protein.
          Length = 649

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 22/105 (20%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
 Frame = +2

Query: 272 KLIMCLLKFLVLAIVPLSFAQNIPKATNLHNGLTEKIGNF-SIELLYHTSNLEQSKGNLI 448
           K ++C +   +LA +       +      H     ++    +++LL    +++    N +
Sbjct: 2   KAVLCAIFVTLLAAIGQGLPTQLEDEN--HGSFAGQVSQLIALQLLKFNKDID---ANQV 56

Query: 449 MSPITVWTVLAVIAEGASGNRDGRSIMRYGYKQSIRTSLEANSKK 583
            SP+ V ++LA++AE + G+        +GY +  RT L    K+
Sbjct: 57  HSPLGVASILAMLAEASEGDTYSEFEQVFGYPKD-RTKLRDAYKR 100


>AE014134-2538|AAF53422.1| 1801|Drosophila melanogaster CG3491-PA
           protein.
          Length = 1801

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 18/86 (20%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
 Frame = +1

Query: 505 KSRRQINHALRLQAKHTNVTRSEFQK--ISEWLRVNTNTIELAKINAIIVDKQRLPQQDF 678
           +S R      R +++ TN+T ++  K  I+   ++  +T      N ++ +   + Q+  
Sbjct: 267 QSERNFYSGYRSESEGTNITPAKRSKAQINSIPKLEYSTTYGQAQNLVVSENANITQKPS 326

Query: 679 HDNAKTYYETDMITLNFEDAQNSVNF 756
            D    Y  T+   +N  D+Q  +N+
Sbjct: 327 SDIKSRYRSTEYNQINKPDSQQPINY 352


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,223,988
Number of Sequences: 53049
Number of extensions: 655782
Number of successful extensions: 1838
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1838
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)