Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00219
         (752 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...   117   3e-28
EF492429-1|ABP35929.1|  155|Anopheles gambiae lysozyme i-2 protein.    25   3.3  

>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score =  117 bits (282), Expect = 3e-28
 Identities = 53/81 (65%), Positives = 61/81 (75%)
 Frame = +3

Query: 255 PVAKGATYGKPKSHGVNQLKPTRKLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVI 434
           PV KG TYGKPKSHGVNQLKP R LQS+AEE            +SYWVAQD+++KYFEVI
Sbjct: 74  PVHKGCTYGKPKSHGVNQLKPYRCLQSVAEERVGGRLGGLRVLNSYWVAQDAAHKYFEVI 133

Query: 435 LVDPSHKAIRRDPKINWIVNA 497
           +VDP + AIRRDP +NWI NA
Sbjct: 134 MVDPPNNAIRRDPNVNWICNA 154



 Score =  107 bits (257), Expect = 4e-25
 Identities = 46/59 (77%), Positives = 52/59 (88%)
 Frame = +1

Query: 37  MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGY 213
           MGAYRY+QELYRKK SDVMR+LLRVR WQYRQ+TR HRAPRP RP + RRLGY+AK G+
Sbjct: 1   MGAYRYVQELYRKKQSDVMRYLLRVRAWQYRQMTRFHRAPRPWRPTRLRRLGYKAKTGF 59



 Score = 74.9 bits (176), Expect = 2e-15
 Identities = 36/46 (78%), Positives = 40/46 (86%)
 Frame = +2

Query: 509 REMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 646
           RE+RGLTSAG+SSRGLGK +RYSQT GGSRRAA +RRN L LRR R
Sbjct: 159 RELRGLTSAGKSSRGLGKAYRYSQTIGGSRRAAGVRRNRLHLRRYR 204


>EF492429-1|ABP35929.1|  155|Anopheles gambiae lysozyme i-2 protein.
          Length = 155

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -2

Query: 580 LRVSMSLAETSGAATSRSQTTHLTCLCTAFT 488
           L + +SLA  +GA  S    T   C+C A T
Sbjct: 8   LLLLLSLATVNGAFLSNLNATCFRCICDAST 38


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 789,999
Number of Sequences: 2352
Number of extensions: 14911
Number of successful extensions: 43
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)