Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00219
         (752 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094841-1|AAM11194.1|  204|Drosophila melanogaster RE01373p pro...   120   2e-27
AF030251-1|AAB84223.1|  204|Drosophila melanogaster ribosomal L1...   120   2e-27

>AY094841-1|AAM11194.1|  204|Drosophila melanogaster RE01373p
           protein.
          Length = 204

 Score =  120 bits (289), Expect = 2e-27
 Identities = 55/78 (70%), Positives = 59/78 (75%)
 Frame = +3

Query: 255 PVAKGATYGKPKSHGVNQLKPTRKLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVI 434
           PV KG TYGKPKSHGVNQLKP R LQSIAEE            +SYW+AQD+SYKYFEVI
Sbjct: 74  PVPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYWIAQDASYKYFEVI 133

Query: 435 LVDPSHKAIRRDPKINWI 488
           L+D  H AIRRDPKINWI
Sbjct: 134 LIDTHHSAIRRDPKINWI 151



 Score =  119 bits (287), Expect = 4e-27
 Identities = 51/59 (86%), Positives = 58/59 (98%)
 Frame = +1

Query: 37  MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGY 213
           MGAYRY+QELYRKK SDVMR+LLR+RVWQYRQLT++HR+PRPTRPDKARRLGYRAKQG+
Sbjct: 1   MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGF 59



 Score = 76.6 bits (180), Expect = 3e-14
 Identities = 34/46 (73%), Positives = 40/46 (86%)
 Frame = +2

Query: 509 REMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 646
           RE+RGLTSAG+SSRG+GKG+RYSQT GGSRRAAW R+N   + RKR
Sbjct: 159 RELRGLTSAGKSSRGIGKGYRYSQTIGGSRRAAWKRKNREHMHRKR 204


>AF030251-1|AAB84223.1|  204|Drosophila melanogaster ribosomal L15
           (YL10) protein homologueprotein.
          Length = 204

 Score =  120 bits (289), Expect = 2e-27
 Identities = 55/78 (70%), Positives = 59/78 (75%)
 Frame = +3

Query: 255 PVAKGATYGKPKSHGVNQLKPTRKLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVI 434
           PV KG TYGKPKSHGVNQLKP R LQSIAEE            +SYW+AQD+SYKYFEVI
Sbjct: 74  PVPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYWIAQDASYKYFEVI 133

Query: 435 LVDPSHKAIRRDPKINWI 488
           L+D  H AIRRDPKINWI
Sbjct: 134 LIDTHHSAIRRDPKINWI 151



 Score =  119 bits (287), Expect = 4e-27
 Identities = 51/59 (86%), Positives = 58/59 (98%)
 Frame = +1

Query: 37  MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGY 213
           MGAYRY+QELYRKK SDVMR+LLR+RVWQYRQLT++HR+PRPTRPDKARRLGYRAKQG+
Sbjct: 1   MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGF 59



 Score = 76.6 bits (180), Expect = 3e-14
 Identities = 34/46 (73%), Positives = 40/46 (86%)
 Frame = +2

Query: 509 REMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 646
           RE+RGLTSAG+SSRG+GKG+RYSQT GGSRRAAW R+N   + RKR
Sbjct: 159 RELRGLTSAGKSSRGIGKGYRYSQTIGGSRRAAWKRKNREHMHRKR 204


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,886,870
Number of Sequences: 53049
Number of extensions: 706262
Number of successful extensions: 1965
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1965
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)