Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00218
         (673 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   1.7  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   5.3  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   5.3  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   6.9  
DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    21   9.2  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   9.2  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    21   9.2  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +2

Query: 266 F*ATIVMIRLSGYQNSRSMMWNRR 337
           F +T++++ LS YQ  ++ +W  R
Sbjct: 149 FHSTLLLMILSRYQRLKAQLWQNR 172


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 513 ARKEILPRTHLRQSCDSFSKVRLDSI 436
           + KEI  R  +  S D+  K+R +S+
Sbjct: 32  SNKEIFLRELISNSSDALDKIRYESL 57


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 444 PDALLKNCHKIGE 482
           PDAL+ NC K  E
Sbjct: 78  PDALVTNCSKCSE 90


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 198 DGFLFR*KCPKPSACILP 251
           D  LF  KCPKP+    P
Sbjct: 29  DEELFHQKCPKPAPIYSP 46


>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +3

Query: 417 DAILFDECYPDALLKNCHKIGE 482
           +A +  +  PDAL+  C K  +
Sbjct: 56  EAAILRDVIPDALITGCRKCND 77


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 142 RKRNLSDCHYP 174
           RK+N+  CH P
Sbjct: 310 RKKNIHSCHIP 320


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +3

Query: 417 DAILFDECYPDALLKNCHKIGE 482
           +A +  +  PDAL+  C K  +
Sbjct: 56  EAAILRDVIPDALITGCRKCND 77


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,267
Number of Sequences: 336
Number of extensions: 3204
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)