Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00218
         (673 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118897-1|AAM50757.1|  566|Drosophila melanogaster LD07633p pro...    42   0.001
BT010062-1|AAQ22531.1| 1145|Drosophila melanogaster LD15381p pro...    33   0.35 
AE014134-3324|AAF53950.2| 1145|Drosophila melanogaster CG9270-PA...    33   0.35 
AE014134-3323|AAS64733.1| 1225|Drosophila melanogaster CG9270-PB...    33   0.35 

>AY118897-1|AAM50757.1|  566|Drosophila melanogaster LD07633p
           protein.
          Length = 566

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 16/38 (42%), Positives = 28/38 (73%)
 Frame = +2

Query: 533 VMKIVPIAGHTKVHGEDQKDYHEIISEIVIAMELSALR 646
           V+KI+P+ G T ++GE QK + +I+ EI+I  ++ +LR
Sbjct: 280 VLKIIPLEGSTVINGEKQKTFSQILPEIIITKKMCSLR 317



 Score = 37.9 bits (84), Expect = 0.012
 Identities = 17/34 (50%), Positives = 19/34 (55%)
 Frame = +3

Query: 408 HQTDAILFDECYPDALLKNCHKIGEGVYGEVFLC 509
           HQ   + F+  Y    L N  KIGEG YGEVF C
Sbjct: 232 HQCTPLPFNTAYEQHKLLNTKKIGEGAYGEVFRC 265


>BT010062-1|AAQ22531.1| 1145|Drosophila melanogaster LD15381p
           protein.
          Length = 1145

 Score = 33.1 bits (72), Expect = 0.35
 Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
 Frame = +3

Query: 333 GDHRSRYT*YFESCCYSSRLRVTSMHQ-TDAILFDECYPDALLKNCHKIGEGVYGEVF 503
           GD R+  + Y       SR+ VTS+   T++IL +E  P    ++  KIG G+YG+ F
Sbjct: 504 GDSRNDKSTYSRQSSRVSRVSVTSVDSSTESILDNERQPAQESRSQGKIGLGIYGKYF 561


>AE014134-3324|AAF53950.2| 1145|Drosophila melanogaster CG9270-PA,
           isoform A protein.
          Length = 1145

 Score = 33.1 bits (72), Expect = 0.35
 Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
 Frame = +3

Query: 333 GDHRSRYT*YFESCCYSSRLRVTSMHQ-TDAILFDECYPDALLKNCHKIGEGVYGEVF 503
           GD R+  + Y       SR+ VTS+   T++IL +E  P    ++  KIG G+YG+ F
Sbjct: 504 GDSRNDKSTYSRQSSRVSRVSVTSVDSSTESILDNERQPAQESRSQGKIGLGIYGKYF 561


>AE014134-3323|AAS64733.1| 1225|Drosophila melanogaster CG9270-PB,
           isoform B protein.
          Length = 1225

 Score = 33.1 bits (72), Expect = 0.35
 Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
 Frame = +3

Query: 333 GDHRSRYT*YFESCCYSSRLRVTSMHQ-TDAILFDECYPDALLKNCHKIGEGVYGEVF 503
           GD R+  + Y       SR+ VTS+   T++IL +E  P    ++  KIG G+YG+ F
Sbjct: 584 GDSRNDKSTYSRQSSRVSRVSVTSVDSSTESILDNERQPAQESRSQGKIGLGIYGKYF 641


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,070,958
Number of Sequences: 53049
Number of extensions: 598388
Number of successful extensions: 1415
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1415
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)